Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.01■□□□□ 0.47
RPS4XP62701 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.01■□□□□ 0.47
RPS4XP62701 AC007952.6-201ENST00000573168 2673 ntBASIC18■□□□□ 0.47
RPS4XP62701 AC003957.1-201ENST00000625108 2673 ntBASIC18■□□□□ 0.47
RPS4XP62701 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RPS4XP62701 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4XP62701 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4XP62701 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPS4XP62701 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18■□□□□ 0.47
RPS4XP62701 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPS4XP62701 KRT8P17-201ENST00000453110 1448 ntBASIC18■□□□□ 0.47
RPS4XP62701 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4XP62701 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4XP62701 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18■□□□□ 0.47
RPS4XP62701 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18■□□□□ 0.47
RPS4XP62701 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18■□□□□ 0.47
RPS4XP62701 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPS4XP62701 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
RPS4XP62701 AL031963.3-201ENST00000606441 850 ntBASIC18■□□□□ 0.47
RPS4XP62701 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18■□□□□ 0.47
RPS4XP62701 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4XP62701 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPS4XP62701 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18■□□□□ 0.47
RPS4XP62701 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18■□□□□ 0.47
RPS4XP62701 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4XP62701 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4XP62701 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.99■□□□□ 0.47
RPS4XP62701 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4XP62701 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4XP62701 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4XP62701 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4XP62701 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4XP62701 AL512625.2-201ENST00000417533 625 ntBASIC17.99■□□□□ 0.47
RPS4XP62701 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.99■□□□□ 0.47
RPS4XP62701 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.99■□□□□ 0.47
RPS4XP62701 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4XP62701 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RPS4XP62701 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4XP62701 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPS4XP62701 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.99■□□□□ 0.47
RPS4XP62701 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.98■□□□□ 0.47
RPS4XP62701 AC010980.2-201ENST00000587099 1412 ntBASIC17.98■□□□□ 0.47
RPS4XP62701 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 AL158211.5-201ENST00000623583 2518 ntBASIC17.98■□□□□ 0.47
RPS4XP62701 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.98■□□□□ 0.47
RPS4XP62701 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.98■□□□□ 0.47
RPS4XP62701 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
RPS4XP62701 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS4XP62701 RNA5SP413-201ENST00000516373 109 ntBASIC17.98■□□□□ 0.47
RPS4XP62701 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS4XP62701 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS4XP62701 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.98■□□□□ 0.47
RPS4XP62701 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.98■□□□□ 0.47
RPS4XP62701 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.98■□□□□ 0.47
RPS4XP62701 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 AC066615.1-201ENST00000640911 628 ntBASIC17.98■□□□□ 0.47
RPS4XP62701 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.98■□□□□ 0.47
RPS4XP62701 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS4XP62701 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RPS4XP62701 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.98■□□□□ 0.47
RPS4XP62701 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.98■□□□□ 0.47
RPS4XP62701 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPS4XP62701 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4XP62701 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.97■□□□□ 0.47
RPS4XP62701 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RPS4XP62701 AC009237.14-201ENST00000609975 1594 ntBASIC17.97■□□□□ 0.47
RPS4XP62701 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.97■□□□□ 0.47
RPS4XP62701 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4XP62701 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RPS4XP62701 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RPS4XP62701 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.97■□□□□ 0.47
RPS4XP62701 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.97■□□□□ 0.47
RPS4XP62701 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.97■□□□□ 0.47
RPS4XP62701 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.97■□□□□ 0.47
RPS4XP62701 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4XP62701 AC092118.2-201ENST00000613495 667 ntBASIC17.97■□□□□ 0.47
RPS4XP62701 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.97■□□□□ 0.47
RPS4XP62701 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.97■□□□□ 0.47
RPS4XP62701 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.97■□□□□ 0.47
RPS4XP62701 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.97■□□□□ 0.47
RPS4XP62701 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.97■□□□□ 0.47
RPS4XP62701 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4XP62701 KRT8P20-201ENST00000423953 1409 ntBASIC17.97■□□□□ 0.47
RPS4XP62701 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4XP62701 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms