Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN17P56750 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLDN17P56750 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CLDN17P56750 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLDN17P56750 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN17P56750 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN17P56750 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN17P56750 AC083880.1-201ENST00000608266 535 ntBASIC17.8■□□□□ 0.44
CLDN17P56750 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN17P56750 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN17P56750 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDN17P56750 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN17P56750 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN17P56750 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN17P56750 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CLDN17P56750 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN17P56750 KRT16P6-202ENST00000425692 1426 ntBASIC17.79■□□□□ 0.44
CLDN17P56750 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN17P56750 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN17P56750 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN17P56750 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN17P56750 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CLDN17P56750 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN17P56750 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLDN17P56750 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN17P56750 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN17P56750 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN17P56750 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN17P56750 AL390719.1-204ENST00000412397 1219 ntBASIC17.78■□□□□ 0.44
CLDN17P56750 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN17P56750 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN17P56750 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLDN17P56750 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN17P56750 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDN17P56750 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN17P56750 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN17P56750 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN17P56750 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN17P56750 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN17P56750 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN17P56750 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLDN17P56750 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLDN17P56750 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN17P56750 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN17P56750 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN17P56750 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN17P56750 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN17P56750 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN17P56750 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN17P56750 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN17P56750 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.77■□□□□ 0.44
CLDN17P56750 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN17P56750 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.77■□□□□ 0.44
CLDN17P56750 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN17P56750 AC092368.3-202ENST00000574180 1591 ntBASIC17.77■□□□□ 0.44
CLDN17P56750 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN17P56750 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN17P56750 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN17P56750 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CLDN17P56750 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN17P56750 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN17P56750 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN17P56750 TCF3P1-201ENST00000423021 1937 ntBASIC17.76■□□□□ 0.43
CLDN17P56750 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN17P56750 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN17P56750 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN17P56750 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN17P56750 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN17P56750 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN17P56750 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN17P56750 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN17P56750 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN17P56750 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN17P56750 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN17P56750 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms