Protein–RNA interactions for Protein: P53939

NIS1, Protein NIS1, yeastyeast

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIS1P53939 FIG2YCR089W 4830 nt1.71□□□□□ -2.14
NIS1P53939 SKI7YOR076C 2244 nt1.69□□□□□ -2.14
NIS1P53939 YGR130CYGR130C 2451 nt1.68□□□□□ -2.14
NIS1P53939 snR38snR38 95 nt1.67□□□□□ -2.14
NIS1P53939 BRR2YER172C 6492 nt1.67□□□□□ -2.14
NIS1P53939 tQ(UUG)QtQ(UUG)Q 76 nt1.66□□□□□ -2.14
NIS1P53939 SSK2YNR031C 4740 nt1.66□□□□□ -2.14
NIS1P53939 LAA1YJL207C 6045 nt1.65□□□□□ -2.15
NIS1P53939 AI1Q0050 2505 nt1.63□□□□□ -2.15
NIS1P53939 YDL159W-AYDL159W-A 132 nt1.61□□□□□ -2.15
NIS1P53939 snR75snR75 89 nt1.58□□□□□ -2.16
NIS1P53939 YER078W-AYER078W-A 165 nt1.58□□□□□ -2.16
NIS1P53939 SPT7YBR081C 3999 nt1.57□□□□□ -2.16
NIS1P53939 MLP2YIL149C 5040 nt1.55□□□□□ -2.16
NIS1P53939 VPS15YBR097W 4365 nt1.55□□□□□ -2.16
NIS1P53939 YGR122C-AYGR122C-A 129 nt1.54□□□□□ -2.16
NIS1P53939 YER090C-AYER090C-A 90 nt1.52□□□□□ -2.17
NIS1P53939 PAU24YBR301W 363 nt1.5□□□□□ -2.17
NIS1P53939 MEC1YBR136W 7107 nt1.5□□□□□ -2.17
NIS1P53939 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
NIS1P53939 YNL284C-BYNL284C-B 5268 nt1.46□□□□□ -2.17
NIS1P53939 IRA1YBR140C 9279 nt1.46□□□□□ -2.18
NIS1P53939 CCH1YGR217W 6120 nt1.44□□□□□ -2.18
NIS1P53939 LTE1YAL024C 4308 nt1.44□□□□□ -2.18
NIS1P53939 IML1YJR138W 4755 nt1.4□□□□□ -2.18
NIS1P53939 tH(GUG)E1tH(GUG)E1 72 nt1.4□□□□□ -2.19
NIS1P53939 tH(GUG)E2tH(GUG)E2 72 nt1.4□□□□□ -2.19
NIS1P53939 tH(GUG)G1tH(GUG)G1 72 nt1.4□□□□□ -2.19
NIS1P53939 tH(GUG)G2tH(GUG)G2 72 nt1.4□□□□□ -2.19
NIS1P53939 tH(GUG)HtH(GUG)H 72 nt1.4□□□□□ -2.19
NIS1P53939 tH(GUG)KtH(GUG)K 72 nt1.4□□□□□ -2.19
NIS1P53939 tH(GUG)MtH(GUG)M 72 nt1.4□□□□□ -2.19
NIS1P53939 SCC2YDR180W 4482 nt1.38□□□□□ -2.19
NIS1P53939 YPR117WYPR117W 7470 nt1.35□□□□□ -2.19
NIS1P53939 snR67snR67 82 nt1.35□□□□□ -2.19
NIS1P53939 HKR1YDR420W 5409 nt1.33□□□□□ -2.2
NIS1P53939 YOR192C-BYOR192C-B 5313 nt1.33□□□□□ -2.2
NIS1P53939 tV(UAC)BtV(UAC)B 74 nt1.32□□□□□ -2.2
NIS1P53939 tV(UAC)DtV(UAC)D 74 nt1.32□□□□□ -2.2
NIS1P53939 VAM6YDL077C 3150 nt1.32□□□□□ -2.2
NIS1P53939 PET111YMR257C 2403 nt1.3□□□□□ -2.2
NIS1P53939 tQ(UUG)E2tQ(UUG)E2 72 nt1.3□□□□□ -2.2
NIS1P53939 RKR1YMR247C 4689 nt1.3□□□□□ -2.2
NIS1P53939 YNL054W-BYNL054W-B 5250 nt1.24□□□□□ -2.21
NIS1P53939 MYO1YHR023W 5787 nt1.23□□□□□ -2.21
NIS1P53939 tF(GAA)BtF(GAA)B 73 nt1.23□□□□□ -2.21
NIS1P53939 tF(GAA)FtF(GAA)F 73 nt1.23□□□□□ -2.21
NIS1P53939 tF(GAA)GtF(GAA)G 73 nt1.23□□□□□ -2.21
NIS1P53939 tF(GAA)H1tF(GAA)H1 73 nt1.23□□□□□ -2.21
NIS1P53939 tF(GAA)H2tF(GAA)H2 73 nt1.23□□□□□ -2.21
NIS1P53939 tF(GAA)MtF(GAA)M 73 nt1.23□□□□□ -2.21
NIS1P53939 tF(GAA)P1tF(GAA)P1 73 nt1.23□□□□□ -2.21
NIS1P53939 tF(GAA)P2tF(GAA)P2 73 nt1.23□□□□□ -2.21
NIS1P53939 MLP1YKR095W 5628 nt1.2□□□□□ -2.22
NIS1P53939 BEM2YER155C 6504 nt1.16□□□□□ -2.22
NIS1P53939 BUD3YCL014W 4911 nt1.15□□□□□ -2.23
NIS1P53939 YBL100W-BYBL100W-B 5313 nt1.11□□□□□ -2.23
NIS1P53939 DOP1YDR141C 5097 nt1.11□□□□□ -2.23
NIS1P53939 YKL106C-AYKL106C-A 120 nt1.1□□□□□ -2.23
NIS1P53939 YJR029WYJR029W 5268 nt1.09□□□□□ -2.23
NIS1P53939 YMR160WYMR160W 2451 nt1.09□□□□□ -2.24
NIS1P53939 UTP20YBL004W 7482 nt1.08□□□□□ -2.24
NIS1P53939 YOL014WYOL014W 375 nt1.06□□□□□ -2.24
NIS1P53939 IQG1YPL242C 4488 nt1.05□□□□□ -2.24
NIS1P53939 YDL114W-AYDL114W-A 114 nt1.04□□□□□ -2.24
NIS1P53939 YOR186C-AYOR186C-A 210 nt1□□□□□ -2.25
NIS1P53939 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
NIS1P53939 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
NIS1P53939 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
NIS1P53939 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
NIS1P53939 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
NIS1P53939 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
NIS1P53939 tV(UAC)QtV(UAC)Q 76 nt0.92□□□□□ -2.26
NIS1P53939 YKL145W-AYKL145W-A 93 nt0.92□□□□□ -2.26
NIS1P53939 YML100W-AYML100W-A 174 nt0.87□□□□□ -2.27
NIS1P53939 YPR159C-AYPR159C-A 102 nt0.84□□□□□ -2.27
NIS1P53939 YOR376W-AYOR376W-A 156 nt0.78□□□□□ -2.28
NIS1P53939 YOR316C-AYOR316C-A 210 nt0.73□□□□□ -2.29
NIS1P53939 tT(AGU)BtT(AGU)B 73 nt0.71□□□□□ -2.3
NIS1P53939 tT(AGU)CtT(AGU)C 73 nt0.71□□□□□ -2.3
NIS1P53939 tT(AGU)DtT(AGU)D 73 nt0.71□□□□□ -2.3
NIS1P53939 tT(AGU)HtT(AGU)H 73 nt0.71□□□□□ -2.3
NIS1P53939 tT(AGU)I1tT(AGU)I1 73 nt0.71□□□□□ -2.3
NIS1P53939 tT(AGU)I2tT(AGU)I2 73 nt0.71□□□□□ -2.3
NIS1P53939 tT(AGU)JtT(AGU)J 73 nt0.71□□□□□ -2.3
NIS1P53939 tT(AGU)N1tT(AGU)N1 73 nt0.71□□□□□ -2.3
NIS1P53939 tT(AGU)N2tT(AGU)N2 73 nt0.71□□□□□ -2.3
NIS1P53939 tT(AGU)O1tT(AGU)O1 73 nt0.71□□□□□ -2.3
NIS1P53939 tT(AGU)O2tT(AGU)O2 73 nt0.71□□□□□ -2.3
NIS1P53939 ESP1YGR098C 4893 nt0.71□□□□□ -2.3
NIS1P53939 UTP10YJL109C 5310 nt0.66□□□□□ -2.3
NIS1P53939 snR77snR77 88 nt0.64□□□□□ -2.31
NIS1P53939 SBH2YER019C-A 267 nt0.64□□□□□ -2.31
NIS1P53939 SOV1YMR066W 2697 nt0.62□□□□□ -2.31
NIS1P53939 THO2YNL139C 4794 nt0.6□□□□□ -2.31
NIS1P53939 YMR272W-AYMR272W-A 114 nt0.6□□□□□ -2.31
NIS1P53939 FMP27YLR454W 7887 nt0.58□□□□□ -2.32
NIS1P53939 snR128snR128 126 nt0.56□□□□□ -2.32
NIS1P53939 snR40snR40 97 nt0.56□□□□□ -2.32
NIS1P53939 PAU9YBL108C-A 129 nt0.53□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 9.8 ms