Protein–RNA interactions for Protein: P53919

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, yeastyeast

Known RBP Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NAF1P53919 YGR122C-AYGR122C-A 129 nt1.69□□□□□ -2.14
NAF1P53919 HUG1YML058W-A 207 nt1.67□□□□□ -2.14
NAF1P53919 NIP1YMR309C 2439 nt1.67□□□□□ -2.14
NAF1P53919 LAA1YJL207C 6045 nt1.65□□□□□ -2.14
NAF1P53919 YLL006W-AYLL006W-A 177 nt1.63□□□□□ -2.15
NAF1P53919 YPL060C-AYPL060C-A 3315 nt1.63□□□□□ -2.15
NAF1P53919 NST1YNL091W 3723 nt1.62□□□□□ -2.15
NAF1P53919 CLU1YMR012W 3834 nt1.62□□□□□ -2.15
NAF1P53919 SPT7YBR081C 3999 nt1.59□□□□□ -2.15
NAF1P53919 CCH1YGR217W 6120 nt1.58□□□□□ -2.16
NAF1P53919 YGR130CYGR130C 2451 nt1.58□□□□□ -2.16
NAF1P53919 tQ(UUG)E2tQ(UUG)E2 72 nt1.56□□□□□ -2.16
NAF1P53919 PAU12YGR294W 363 nt1.56□□□□□ -2.16
NAF1P53919 FIG2YCR089W 4830 nt1.54□□□□□ -2.16
NAF1P53919 SIP4YJL089W 2490 nt1.54□□□□□ -2.16
NAF1P53919 YJL077W-AYJL077W-A 87 nt1.54□□□□□ -2.16
NAF1P53919 BUL2YML111W 2763 nt1.53□□□□□ -2.16
NAF1P53919 SPC110YDR356W 2835 nt1.53□□□□□ -2.16
NAF1P53919 YNL284C-BYNL284C-B 5268 nt1.52□□□□□ -2.17
NAF1P53919 tH(GUG)E1tH(GUG)E1 72 nt1.49□□□□□ -2.17
NAF1P53919 tH(GUG)E2tH(GUG)E2 72 nt1.49□□□□□ -2.17
NAF1P53919 tH(GUG)G1tH(GUG)G1 72 nt1.49□□□□□ -2.17
NAF1P53919 tH(GUG)G2tH(GUG)G2 72 nt1.49□□□□□ -2.17
NAF1P53919 tH(GUG)HtH(GUG)H 72 nt1.49□□□□□ -2.17
NAF1P53919 tH(GUG)KtH(GUG)K 72 nt1.49□□□□□ -2.17
NAF1P53919 tH(GUG)MtH(GUG)M 72 nt1.49□□□□□ -2.17
NAF1P53919 tQ(UUG)QtQ(UUG)Q 76 nt1.49□□□□□ -2.17
NAF1P53919 PET111YMR257C 2403 nt1.48□□□□□ -2.17
NAF1P53919 FYV8YGR196C 2454 nt1.46□□□□□ -2.18
NAF1P53919 IML1YJR138W 4755 nt1.44□□□□□ -2.18
NAF1P53919 RKR1YMR247C 4689 nt1.43□□□□□ -2.18
NAF1P53919 MYO1YHR023W 5787 nt1.42□□□□□ -2.18
NAF1P53919 BUD3YCL014W 4911 nt1.41□□□□□ -2.18
NAF1P53919 HKR1YDR420W 5409 nt1.4□□□□□ -2.19
NAF1P53919 YER090C-AYER090C-A 90 nt1.39□□□□□ -2.19
NAF1P53919 YOR192C-BYOR192C-B 5313 nt1.38□□□□□ -2.19
NAF1P53919 YNL054W-BYNL054W-B 5250 nt1.36□□□□□ -2.19
NAF1P53919 tV(UAC)BtV(UAC)B 74 nt1.3□□□□□ -2.2
NAF1P53919 tV(UAC)DtV(UAC)D 74 nt1.3□□□□□ -2.2
NAF1P53919 YPR117WYPR117W 7470 nt1.28□□□□□ -2.21
NAF1P53919 SCC2YDR180W 4482 nt1.26□□□□□ -2.21
NAF1P53919 snR67snR67 82 nt1.23□□□□□ -2.21
NAF1P53919 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
NAF1P53919 YDL114W-AYDL114W-A 114 nt1.2□□□□□ -2.22
NAF1P53919 YOR376W-AYOR376W-A 156 nt1.16□□□□□ -2.22
NAF1P53919 PAU24YBR301W 363 nt1.16□□□□□ -2.22
NAF1P53919 tV(UAC)QtV(UAC)Q 76 nt1.14□□□□□ -2.23
NAF1P53919 YKL106C-AYKL106C-A 120 nt1.14□□□□□ -2.23
NAF1P53919 YJR029WYJR029W 5268 nt1.13□□□□□ -2.23
NAF1P53919 YPR137C-BYPR137C-B 5268 nt1.13□□□□□ -2.23
NAF1P53919 YMR160WYMR160W 2451 nt1.1□□□□□ -2.23
NAF1P53919 LTE1YAL024C 4308 nt1.08□□□□□ -2.24
NAF1P53919 BEM2YER155C 6504 nt1.06□□□□□ -2.24
NAF1P53919 MLP2YIL149C 5040 nt1.05□□□□□ -2.24
NAF1P53919 YBL100W-BYBL100W-B 5313 nt1.04□□□□□ -2.24
NAF1P53919 DOP1YDR141C 5097 nt1.01□□□□□ -2.25
NAF1P53919 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
NAF1P53919 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
NAF1P53919 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
NAF1P53919 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
NAF1P53919 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
NAF1P53919 snR40snR40 97 nt0.98□□□□□ -2.25
NAF1P53919 MLP1YKR095W 5628 nt0.94□□□□□ -2.26
NAF1P53919 snR77snR77 88 nt0.83□□□□□ -2.28
NAF1P53919 YOR316C-AYOR316C-A 210 nt0.83□□□□□ -2.28
NAF1P53919 YML100W-AYML100W-A 174 nt0.82□□□□□ -2.28
NAF1P53919 YOR186C-AYOR186C-A 210 nt0.82□□□□□ -2.28
NAF1P53919 tT(AGU)BtT(AGU)B 73 nt0.8□□□□□ -2.28
NAF1P53919 tT(AGU)CtT(AGU)C 73 nt0.8□□□□□ -2.28
NAF1P53919 tT(AGU)DtT(AGU)D 73 nt0.8□□□□□ -2.28
NAF1P53919 tT(AGU)HtT(AGU)H 73 nt0.8□□□□□ -2.28
NAF1P53919 tT(AGU)I1tT(AGU)I1 73 nt0.8□□□□□ -2.28
NAF1P53919 tT(AGU)I2tT(AGU)I2 73 nt0.8□□□□□ -2.28
NAF1P53919 tT(AGU)JtT(AGU)J 73 nt0.8□□□□□ -2.28
NAF1P53919 tT(AGU)N1tT(AGU)N1 73 nt0.8□□□□□ -2.28
NAF1P53919 tT(AGU)N2tT(AGU)N2 73 nt0.8□□□□□ -2.28
NAF1P53919 tT(AGU)O1tT(AGU)O1 73 nt0.8□□□□□ -2.28
NAF1P53919 tT(AGU)O2tT(AGU)O2 73 nt0.8□□□□□ -2.28
NAF1P53919 YPR159C-AYPR159C-A 102 nt0.79□□□□□ -2.28
NAF1P53919 UTP10YJL109C 5310 nt0.77□□□□□ -2.29
NAF1P53919 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
NAF1P53919 SBH2YER019C-A 267 nt0.74□□□□□ -2.29
NAF1P53919 THO2YNL139C 4794 nt0.71□□□□□ -2.3
NAF1P53919 IQG1YPL242C 4488 nt0.67□□□□□ -2.3
NAF1P53919 SOV1YMR066W 2697 nt0.66□□□□□ -2.3
NAF1P53919 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
NAF1P53919 tF(GAA)BtF(GAA)B 73 nt0.64□□□□□ -2.31
NAF1P53919 tF(GAA)FtF(GAA)F 73 nt0.64□□□□□ -2.31
NAF1P53919 tF(GAA)GtF(GAA)G 73 nt0.64□□□□□ -2.31
NAF1P53919 tF(GAA)H1tF(GAA)H1 73 nt0.64□□□□□ -2.31
NAF1P53919 tF(GAA)H2tF(GAA)H2 73 nt0.64□□□□□ -2.31
NAF1P53919 tF(GAA)MtF(GAA)M 73 nt0.64□□□□□ -2.31
NAF1P53919 tF(GAA)P1tF(GAA)P1 73 nt0.64□□□□□ -2.31
NAF1P53919 tF(GAA)P2tF(GAA)P2 73 nt0.64□□□□□ -2.31
NAF1P53919 ESP1YGR098C 4893 nt0.58□□□□□ -2.32
NAF1P53919 FMP27YLR454W 7887 nt0.57□□□□□ -2.32
NAF1P53919 PAU9YBL108C-A 129 nt0.55□□□□□ -2.32
NAF1P53919 YKL145W-AYKL145W-A 93 nt0.54□□□□□ -2.32
NAF1P53919 snR128snR128 126 nt0.49□□□□□ -2.33
NAF1P53919 YOL014WYOL014W 375 nt0.48□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 41.3 ms