Protein–RNA interactions for Protein: P53299

TIM13, Mitochondrial import inner membrane translocase subunit TIM13, yeast

Predictions only

Length 105 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM13	P53299	YOR008C-A	YOR008C-A	225 nt		-1.45	□□□□□ -2.64
TIM13	P53299	tF(GAA)Q	tF(GAA)Q	75 nt		-1.47	□□□□□ -2.64
TIM13	P53299	YPL038W-A	YPL038W-A	192 nt		-1.48	□□□□□ -2.65
TIM13	P53299	Q0017	Q0017	162 nt		-1.48	□□□□□ -2.65
TIM13	P53299	YDR157W	YDR157W	402 nt		-1.5	□□□□□ -2.65
TIM13	P53299	snR39B	snR39B	96 nt		-1.51	□□□□□ -2.65
TIM13	P53299	SKI7	YOR076C	2244 nt		-1.51	□□□□□ -2.65
TIM13	P53299	snR67	snR67	82 nt		-1.53	□□□□□ -2.65
TIM13	P53299	YER181C	YER181C	324 nt		-1.53	□□□□□ -2.65
TIM13	P53299	YDR413C	YDR413C	576 nt		-1.54	□□□□□ -2.66
TIM13	P53299	YLR222C-A	YLR222C-A	231 nt		-1.54	□□□□□ -2.66
TIM13	P53299	YBR131C-A	YBR131C-A	90 nt		-1.54	□□□□□ -2.66
TIM13	P53299	RPL39	YJL189W	156 nt		-1.57	□□□□□ -2.66
TIM13	P53299	YNL277W-A	YNL277W-A	189 nt		-1.58	□□□□□ -2.66
TIM13	P53299	YOR329W-A	YOR329W-A	210 nt		-1.58	□□□□□ -2.66
TIM13	P53299	YDR118W-A	YDR118W-A	117 nt		-1.59	□□□□□ -2.66
TIM13	P53299	tD(GUC)Q	tD(GUC)Q	75 nt		-1.59	□□□□□ -2.66
TIM13	P53299	YNL097C-B	YNL097C-B	123 nt		-1.61	□□□□□ -2.67
TIM13	P53299	YLR286W-A	YLR286W-A	135 nt		-1.62	□□□□□ -2.67
TIM13	P53299	YDL240C-A	YDL240C-A	138 nt		-1.64	□□□□□ -2.67
TIM13	P53299	tY(GUA)Q	tY(GUA)Q	84 nt		-1.64	□□□□□ -2.67
TIM13	P53299	YKL118W	YKL118W	312 nt		-1.68	□□□□□ -2.68
TIM13	P53299	YBR178W	YBR178W	375 nt		-1.68	□□□□□ -2.68
TIM13	P53299	YDL159C-B	YDL159C-B	177 nt		-1.71	□□□□□ -2.68
TIM13	P53299	snR55	snR55	98 nt		-1.73	□□□□□ -2.69
TIM13	P53299	YML054C-A	YML054C-A	159 nt		-1.73	□□□□□ -2.69
TIM13	P53299	YNL205C	YNL205C	423 nt		-1.74	□□□□□ -2.69
TIM13	P53299	VAR1	Q0140	1197 nt		-1.77	□□□□□ -2.69
TIM13	P53299	GIM4	YEL003W	336 nt		-1.78	□□□□□ -2.69
TIM13	P53299	CDC65	tQ(CUG)M	72 nt		-1.78	□□□□□ -2.69
TIM13	P53299	snR48	snR48	113 nt		-1.79	□□□□□ -2.7
TIM13	P53299	YPR012W	YPR012W	255 nt		-1.82	□□□□□ -2.7
TIM13	P53299	snR77	snR77	88 nt		-1.84	□□□□□ -2.7
TIM13	P53299	YGR240C-A	YGR240C-A	201 nt		-1.85	□□□□□ -2.71
TIM13	P53299	YOR302W	YOR302W	78 nt		-1.85	□□□□□ -2.71
TIM13	P53299	tL(UAA)Q	tL(UAA)Q	85 nt		-1.86	□□□□□ -2.71
TIM13	P53299	YOL155W-A	YOL155W-A	135 nt		-1.9	□□□□□ -2.71
TIM13	P53299	YLR299C-A	YLR299C-A	93 nt		-1.92	□□□□□ -2.72
TIM13	P53299	YGL188C-A	YGL188C-A	141 nt		-1.94	□□□□□ -2.72
TIM13	P53299	YOR102W	YOR102W	351 nt		-1.94	□□□□□ -2.72
TIM13	P53299	YPL152W-A	YPL152W-A	99 nt		-1.96	□□□□□ -2.72
TIM13	P53299	YBR196C-A	YBR196C-A	150 nt		-2.01	□□□□□ -2.73
TIM13	P53299	YBR126W-B	YBR126W-B	144 nt		-2.02	□□□□□ -2.73
TIM13	P53299	snR65	snR65	100 nt		-2.04	□□□□□ -2.74
TIM13	P53299	YMR315W-A	YMR315W-A	108 nt		-2.05	□□□□□ -2.74
TIM13	P53299	YOR376W-A	YOR376W-A	156 nt		-2.05	□□□□□ -2.74
TIM13	P53299	snR81	snR81	201 nt		-2.06	□□□□□ -2.74
TIM13	P53299	snR52	snR52	92 nt		-2.07	□□□□□ -2.74
TIM13	P53299	YLR342W-A	YLR342W-A	174 nt		-2.1	□□□□□ -2.75
TIM13	P53299	YHL015W-A	YHL015W-A	84 nt		-2.11	□□□□□ -2.75
TIM13	P53299	YHR180C-B	YHR180C-B	105 nt		-2.24	□□□□□ -2.77
TIM13	P53299	YNL198C	YNL198C	303 nt		-2.25	□□□□□ -2.77
TIM13	P53299	snR80	snR80	171 nt		-2.27	□□□□□ -2.77
TIM13	P53299	YOR316C-A	YOR316C-A	210 nt		-2.27	□□□□□ -2.77
TIM13	P53299	Q0144	Q0144	330 nt		-2.29	□□□□□ -2.78
TIM13	P53299	YJL150W	YJL150W	303 nt		-2.29	□□□□□ -2.78
TIM13	P53299	YKL106C-A	YKL106C-A	120 nt		-2.35	□□□□□ -2.79
TIM13	P53299	YOR231C-A	YOR231C-A	201 nt		-2.36	□□□□□ -2.79
TIM13	P53299	YOR309C	YOR309C	381 nt		-2.38	□□□□□ -2.79
TIM13	P53299	YHR175W-A	YHR175W-A	150 nt		-2.4	□□□□□ -2.79
TIM13	P53299	snR56	snR56	88 nt		-2.43	□□□□□ -2.8
TIM13	P53299	SOM1	YEL059C-A	225 nt		-2.43	□□□□□ -2.8
TIM13	P53299	YBR109W-A	YBR109W-A	225 nt		-2.44	□□□□□ -2.8
TIM13	P53299	YBL053W	YBL053W	375 nt		-2.45	□□□□□ -2.8
TIM13	P53299	tR(ACG)Q2	tR(ACG)Q2	74 nt		-2.49	□□□□□ -2.81
TIM13	P53299	YDR543C	YDR543C	300 nt		-2.53	□□□□□ -2.81
TIM13	P53299	YBR296C-A	YBR296C-A	120 nt		-2.53	□□□□□ -2.81
TIM13	P53299	YDR406W-A	YDR406W-A	246 nt		-2.55	□□□□□ -2.82
TIM13	P53299	YCR095W-A	YCR095W-A	159 nt		-2.56	□□□□□ -2.82
TIM13	P53299	RPL41A	YDL184C	78 nt		-2.59	□□□□□ -2.82
TIM13	P53299	snR38	snR38	95 nt		-2.6	□□□□□ -2.83
TIM13	P53299	YBL071C-B	YBL071C-B	99 nt		-2.71	□□□□□ -2.84
TIM13	P53299	snR6	snR6	112 nt		-2.73	□□□□□ -2.85
TIM13	P53299	YGR151C	YGR151C	336 nt		-2.73	□□□□□ -2.85
TIM13	P53299	YOL083C-A	YOL083C-A	141 nt		-2.73	□□□□□ -2.85
TIM13	P53299	YDR524W-C	YDR524W-C	90 nt		-2.77	□□□□□ -2.85
TIM13	P53299	YOL164W-A	YOL164W-A	183 nt		-2.81	□□□□□ -2.86
TIM13	P53299	YOR335W-A	YOR335W-A	81 nt		-2.88	□□□□□ -2.87
TIM13	P53299	snR73	snR73	106 nt		-2.93	□□□□□ -2.88
TIM13	P53299	YAL037C-A	YAL037C-A	93 nt		-2.93	□□□□□ -2.88
TIM13	P53299	snR47	snR47	99 nt		-2.93	□□□□□ -2.88
TIM13	P53299	YMR046W-A	YMR046W-A	129 nt		-2.97	□□□□□ -2.88
TIM13	P53299	YOL166W-A	YOL166W-A	156 nt		-2.97	□□□□□ -2.88
TIM13	P53299	Q0142	Q0142	177 nt		-3	□□□□□ -2.89
TIM13	P53299	YCL001W-B	YCL001W-B	255 nt		-3.02	□□□□□ -2.89
TIM13	P53299	RPL41B	YDL133C-A	78 nt		-3.06	□□□□□ -2.9
TIM13	P53299	YBL100W-C	YBL100W-C	120 nt		-3.07	□□□□□ -2.9
TIM13	P53299	SPG3	YDR504C	384 nt		-3.1	□□□□□ -2.91
TIM13	P53299	tV(UAC)Q	tV(UAC)Q	76 nt		-3.14	□□□□□ -2.91
TIM13	P53299	YKL225W	YKL225W	348 nt		-3.18	□□□□□ -2.92
TIM13	P53299	YDL114W-A	YDL114W-A	114 nt		-3.2	□□□□□ -2.92
TIM13	P53299	tS(GCU)Q1	tS(GCU)Q1	86 nt		-3.22	□□□□□ -2.92
TIM13	P53299	YNL337W	YNL337W	255 nt		-3.29	□□□□□ -2.94
TIM13	P53299	YLR466C-B	YLR466C-B	117 nt		-3.31	□□□□□ -2.94
TIM13	P53299	snR85	snR85	171 nt		-3.32	□□□□□ -2.94
TIM13	P53299	tM(CAU)Q1	tM(CAU)Q1	76 nt		-3.33	□□□□□ -2.94
TIM13	P53299	YNL338W	YNL338W	159 nt		-3.43	□□□□□ -2.96
TIM13	P53299	YDR524C-A	YDR524C-A	120 nt		-3.5	□□□□□ -2.97
TIM13	P53299	YJR162C	YJR162C	351 nt		-3.52	□□□□□ -2.97
TIM13	P53299	YDR034C-A	YDR034C-A	177 nt		-3.59	□□□□□ -2.98

Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms