Protein–RNA interactions for Protein: P53238

PEF1, Peflin, yeastyeast

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEF1P53238 tF(GAA)H1tF(GAA)H1 73 nt0.62□□□□□ -2.31
PEF1P53238 tF(GAA)H2tF(GAA)H2 73 nt0.62□□□□□ -2.31
PEF1P53238 tF(GAA)MtF(GAA)M 73 nt0.62□□□□□ -2.31
PEF1P53238 tF(GAA)P1tF(GAA)P1 73 nt0.62□□□□□ -2.31
PEF1P53238 tF(GAA)P2tF(GAA)P2 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)BtT(AGU)B 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)CtT(AGU)C 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)DtT(AGU)D 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)HtT(AGU)H 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)I1tT(AGU)I1 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)I2tT(AGU)I2 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)JtT(AGU)J 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)N1tT(AGU)N1 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)N2tT(AGU)N2 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)O1tT(AGU)O1 73 nt0.62□□□□□ -2.31
PEF1P53238 tT(AGU)O2tT(AGU)O2 73 nt0.62□□□□□ -2.31
PEF1P53238 YMR160WYMR160W 2451 nt0.62□□□□□ -2.31
PEF1P53238 MLP1YKR095W 5628 nt0.59□□□□□ -2.32
PEF1P53238 PMP2YEL017C-A 132 nt0.58□□□□□ -2.32
PEF1P53238 YNL266WYNL266W 420 nt0.58□□□□□ -2.32
PEF1P53238 RCO1YMR075W 2055 nt0.58□□□□□ -2.32
PEF1P53238 SEC10YLR166C 2616 nt0.54□□□□□ -2.32
PEF1P53238 EST1YLR233C 2100 nt0.53□□□□□ -2.32
PEF1P53238 snR69snR69 101 nt0.53□□□□□ -2.32
PEF1P53238 YBR178WYBR178W 375 nt0.53□□□□□ -2.32
PEF1P53238 Q0143Q0143 153 nt0.5□□□□□ -2.33
PEF1P53238 YJL077W-AYJL077W-A 87 nt0.5□□□□□ -2.33
PEF1P53238 FMP27YLR454W 7887 nt0.49□□□□□ -2.33
PEF1P53238 YKL145W-AYKL145W-A 93 nt0.48□□□□□ -2.33
PEF1P53238 YOL014WYOL014W 375 nt0.48□□□□□ -2.33
PEF1P53238 YBR196C-AYBR196C-A 150 nt0.48□□□□□ -2.33
PEF1P53238 YBL100W-BYBL100W-B 5313 nt0.48□□□□□ -2.33
PEF1P53238 tD(GUC)QtD(GUC)Q 75 nt0.47□□□□□ -2.33
PEF1P53238 YOR186C-AYOR186C-A 210 nt0.45□□□□□ -2.34
PEF1P53238 RDS3YPR094W 324 nt0.45□□□□□ -2.34
PEF1P53238 tQ(UUG)QtQ(UUG)Q 76 nt0.44□□□□□ -2.34
PEF1P53238 snR85snR85 171 nt0.43□□□□□ -2.34
PEF1P53238 YNL103W-AYNL103W-A 90 nt0.43□□□□□ -2.34
PEF1P53238 YPL060C-AYPL060C-A 3315 nt0.4□□□□□ -2.34
PEF1P53238 IQG1YPL242C 4488 nt0.37□□□□□ -2.35
PEF1P53238 MLP2YIL149C 5040 nt0.37□□□□□ -2.35
PEF1P53238 AI1Q0050 2505 nt0.37□□□□□ -2.35
PEF1P53238 snR61snR61 90 nt0.36□□□□□ -2.35
PEF1P53238 YLR286W-AYLR286W-A 135 nt0.36□□□□□ -2.35
PEF1P53238 YDL159C-BYDL159C-B 177 nt0.35□□□□□ -2.35
PEF1P53238 YLR299C-AYLR299C-A 93 nt0.31□□□□□ -2.36
PEF1P53238 TFB5YDR079C-A 219 nt0.3□□□□□ -2.36
PEF1P53238 YGL041C-BYGL041C-B 183 nt0.3□□□□□ -2.36
PEF1P53238 YOL013W-AYOL013W-A 192 nt0.29□□□□□ -2.36
PEF1P53238 YNL054W-BYNL054W-B 5250 nt0.29□□□□□ -2.36
PEF1P53238 YOL083C-AYOL083C-A 141 nt0.28□□□□□ -2.36
PEF1P53238 YER090C-AYER090C-A 90 nt0.27□□□□□ -2.37
PEF1P53238 YAL037C-AYAL037C-A 93 nt0.27□□□□□ -2.37
PEF1P53238 snR81snR81 201 nt0.25□□□□□ -2.37
PEF1P53238 snR50snR50 90 nt0.25□□□□□ -2.37
PEF1P53238 ESP1YGR098C 4893 nt0.24□□□□□ -2.37
PEF1P53238 SOV1YMR066W 2697 nt0.23□□□□□ -2.37
PEF1P53238 YBL071C-BYBL071C-B 99 nt0.21□□□□□ -2.38
PEF1P53238 YER078W-AYER078W-A 165 nt0.19□□□□□ -2.38
PEF1P53238 YMR326CYMR326C 309 nt0.17□□□□□ -2.38
PEF1P53238 snR128snR128 126 nt0.17□□□□□ -2.38
PEF1P53238 THO2YNL139C 4794 nt0.15□□□□□ -2.39
PEF1P53238 YBL109WYBL109W 336 nt0.11□□□□□ -2.39
PEF1P53238 YOL164W-AYOL164W-A 183 nt0.11□□□□□ -2.39
PEF1P53238 YML054C-AYML054C-A 159 nt0.1□□□□□ -2.39
PEF1P53238 snR67snR67 82 nt0.08□□□□□ -2.4
PEF1P53238 YHR180C-BYHR180C-B 105 nt0.08□□□□□ -2.4
PEF1P53238 YBL100W-CYBL100W-C 120 nt0.08□□□□□ -2.4
PEF1P53238 YHR217CYHR217C 462 nt0.07□□□□□ -2.4
PEF1P53238 YML100W-AYML100W-A 174 nt0.06□□□□□ -2.4
PEF1P53238 YDR524C-AYDR524C-A 120 nt0.04□□□□□ -2.4
PEF1P53238 snR45snR45 172 nt0.02□□□□□ -2.41
PEF1P53238 YGR240C-AYGR240C-A 201 nt0.01□□□□□ -2.41
PEF1P53238 snR47snR47 99 nt0□□□□□ -2.41
PEF1P53238 tS(GCU)Q1tS(GCU)Q1 86 nt-0.02□□□□□ -2.41
PEF1P53238 YJL113WYJL113W 4647 nt-0.04□□□□□ -2.42
PEF1P53238 snR62snR62 100 nt-0.08□□□□□ -2.42
PEF1P53238 RPL41AYDL184C 78 nt-0.09□□□□□ -2.42
PEF1P53238 PAU9YBL108C-A 129 nt-0.1□□□□□ -2.43
PEF1P53238 YBR109W-AYBR109W-A 225 nt-0.1□□□□□ -2.43
PEF1P53238 YBR296C-AYBR296C-A 120 nt-0.12□□□□□ -2.43
PEF1P53238 YDR034C-AYDR034C-A 177 nt-0.14□□□□□ -2.43
PEF1P53238 SKI7YOR076C 2244 nt-0.15□□□□□ -2.43
PEF1P53238 SBH2YER019C-A 267 nt-0.18□□□□□ -2.44
PEF1P53238 YDL247W-AYDL247W-A 75 nt-0.23□□□□□ -2.45
PEF1P53238 snR38snR38 95 nt-0.23□□□□□ -2.45
PEF1P53238 tA(UGC)QtA(UGC)Q 76 nt-0.24□□□□□ -2.45
PEF1P53238 YLL066W-BYLL066W-B 171 nt-0.25□□□□□ -2.45
PEF1P53238 YKL225WYKL225W 348 nt-0.29□□□□□ -2.46
PEF1P53238 URB1YKL014C 5295 nt-0.4□□□□□ -2.47
PEF1P53238 YKL106C-AYKL106C-A 120 nt-0.41□□□□□ -2.48
PEF1P53238 snR64snR64 101 nt-0.48□□□□□ -2.49
PEF1P53238 YOR376W-AYOR376W-A 156 nt-0.48□□□□□ -2.49
PEF1P53238 snR161snR161 161 nt-0.51□□□□□ -2.49
PEF1P53238 tT(UGU)G1tT(UGU)G1 72 nt-0.52□□□□□ -2.49
PEF1P53238 tT(UGU)G2tT(UGU)G2 72 nt-0.52□□□□□ -2.49
PEF1P53238 tT(UGU)PtT(UGU)P 72 nt-0.52□□□□□ -2.49
PEF1P53238 snR33snR33 183 nt-0.59□□□□□ -2.5
PEF1P53238 YOR316C-AYOR316C-A 210 nt-0.61□□□□□ -2.51
PEF1P53238 YDL159W-AYDL159W-A 132 nt-0.65□□□□□ -2.51
Retrieved 100 of 7,029 protein–RNA pairs in 10.9 ms