Protein–RNA interactions for Protein: P53188

CGR1, rRNA-processing protein CGR1, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CGR1P53188 tY(GUA)QtY(GUA)Q 84 nt-1.92□□□□□ -2.72
CGR1P53188 Q0017Q0017 162 nt-1.93□□□□□ -2.72
CGR1P53188 YFL019CYFL019C 354 nt-1.94□□□□□ -2.72
CGR1P53188 YEL014CYEL014C 306 nt-1.95□□□□□ -2.72
CGR1P53188 tF(GAA)QtF(GAA)Q 75 nt-1.96□□□□□ -2.72
CGR1P53188 snR39BsnR39B 96 nt-1.96□□□□□ -2.72
CGR1P53188 YDR157WYDR157W 402 nt-1.98□□□□□ -2.73
CGR1P53188 snR67snR67 82 nt-1.99□□□□□ -2.73
CGR1P53188 YDR413CYDR413C 576 nt-2□□□□□ -2.73
CGR1P53188 YER181CYER181C 324 nt-2□□□□□ -2.73
CGR1P53188 SKI7YOR076C 2244 nt-2.02□□□□□ -2.73
CGR1P53188 RPL39YJL189W 156 nt-2.02□□□□□ -2.73
CGR1P53188 YLR222C-AYLR222C-A 231 nt-2.06□□□□□ -2.74
CGR1P53188 tD(GUC)QtD(GUC)Q 75 nt-2.07□□□□□ -2.74
CGR1P53188 YBR131C-AYBR131C-A 90 nt-2.08□□□□□ -2.74
CGR1P53188 YOR329W-AYOR329W-A 210 nt-2.11□□□□□ -2.75
CGR1P53188 YLR286W-AYLR286W-A 135 nt-2.12□□□□□ -2.75
CGR1P53188 YNL277W-AYNL277W-A 189 nt-2.13□□□□□ -2.75
CGR1P53188 YDL240C-AYDL240C-A 138 nt-2.15□□□□□ -2.75
CGR1P53188 YDR118W-AYDR118W-A 117 nt-2.16□□□□□ -2.76
CGR1P53188 YNL097C-BYNL097C-B 123 nt-2.18□□□□□ -2.76
CGR1P53188 YKL118WYKL118W 312 nt-2.21□□□□□ -2.76
CGR1P53188 YBR178WYBR178W 375 nt-2.23□□□□□ -2.77
CGR1P53188 YDL159C-BYDL159C-B 177 nt-2.24□□□□□ -2.77
CGR1P53188 YML054C-AYML054C-A 159 nt-2.25□□□□□ -2.77
CGR1P53188 YNL205CYNL205C 423 nt-2.25□□□□□ -2.77
CGR1P53188 snR55snR55 98 nt-2.27□□□□□ -2.77
CGR1P53188 GIM4YEL003W 336 nt-2.32□□□□□ -2.78
CGR1P53188 CDC65tQ(CUG)M 72 nt-2.33□□□□□ -2.78
CGR1P53188 snR48snR48 113 nt-2.34□□□□□ -2.78
CGR1P53188 VAR1Q0140 1197 nt-2.38□□□□□ -2.79
CGR1P53188 YPR012WYPR012W 255 nt-2.38□□□□□ -2.79
CGR1P53188 YGR240C-AYGR240C-A 201 nt-2.39□□□□□ -2.79
CGR1P53188 YBR126W-BYBR126W-B 144 nt-2.43□□□□□ -2.8
CGR1P53188 snR77snR77 88 nt-2.44□□□□□ -2.8
CGR1P53188 snR81snR81 201 nt-2.47□□□□□ -2.8
CGR1P53188 YOL155W-AYOL155W-A 135 nt-2.49□□□□□ -2.81
CGR1P53188 YOR102WYOR102W 351 nt-2.49□□□□□ -2.81
CGR1P53188 YOR302WYOR302W 78 nt-2.49□□□□□ -2.81
CGR1P53188 tL(UAA)QtL(UAA)Q 85 nt-2.5□□□□□ -2.81
CGR1P53188 YLR299C-AYLR299C-A 93 nt-2.51□□□□□ -2.81
CGR1P53188 YGL188C-AYGL188C-A 141 nt-2.54□□□□□ -2.82
CGR1P53188 YMR315W-AYMR315W-A 108 nt-2.58□□□□□ -2.82
CGR1P53188 YPL152W-AYPL152W-A 99 nt-2.62□□□□□ -2.83
CGR1P53188 YBR196C-AYBR196C-A 150 nt-2.63□□□□□ -2.83
CGR1P53188 snR65snR65 100 nt-2.68□□□□□ -2.84
CGR1P53188 YOR376W-AYOR376W-A 156 nt-2.7□□□□□ -2.84
CGR1P53188 YLR342W-AYLR342W-A 174 nt-2.72□□□□□ -2.84
CGR1P53188 snR52snR52 92 nt-2.73□□□□□ -2.85
CGR1P53188 YHL015W-AYHL015W-A 84 nt-2.76□□□□□ -2.85
CGR1P53188 YHR180C-BYHR180C-B 105 nt-2.89□□□□□ -2.87
CGR1P53188 YOR309CYOR309C 381 nt-2.89□□□□□ -2.87
CGR1P53188 YNL198CYNL198C 303 nt-2.91□□□□□ -2.88
CGR1P53188 YOR316C-AYOR316C-A 210 nt-2.94□□□□□ -2.88
CGR1P53188 YJL150WYJL150W 303 nt-3□□□□□ -2.89
CGR1P53188 snR80snR80 171 nt-3.06□□□□□ -2.9
CGR1P53188 YKL106C-AYKL106C-A 120 nt-3.06□□□□□ -2.9
CGR1P53188 Q0144Q0144 330 nt-3.08□□□□□ -2.9
CGR1P53188 snR56snR56 88 nt-3.14□□□□□ -2.91
CGR1P53188 YDR543CYDR543C 300 nt-3.14□□□□□ -2.91
CGR1P53188 YOR231C-AYOR231C-A 201 nt-3.14□□□□□ -2.91
CGR1P53188 SOM1YEL059C-A 225 nt-3.17□□□□□ -2.92
CGR1P53188 YHR175W-AYHR175W-A 150 nt-3.18□□□□□ -2.92
CGR1P53188 YBR109W-AYBR109W-A 225 nt-3.21□□□□□ -2.92
CGR1P53188 YDR524W-CYDR524W-C 90 nt-3.25□□□□□ -2.93
CGR1P53188 YOL083C-AYOL083C-A 141 nt-3.25□□□□□ -2.93
CGR1P53188 YCR095W-AYCR095W-A 159 nt-3.3□□□□□ -2.94
CGR1P53188 YBR296C-AYBR296C-A 120 nt-3.3□□□□□ -2.94
CGR1P53188 YDR406W-AYDR406W-A 246 nt-3.32□□□□□ -2.94
CGR1P53188 tR(ACG)Q2tR(ACG)Q2 74 nt-3.32□□□□□ -2.94
CGR1P53188 YBL053WYBL053W 375 nt-3.33□□□□□ -2.94
CGR1P53188 RPL41AYDL184C 78 nt-3.37□□□□□ -2.95
CGR1P53188 snR38snR38 95 nt-3.46□□□□□ -2.96
CGR1P53188 snR6snR6 112 nt-3.58□□□□□ -2.98
CGR1P53188 YGR151CYGR151C 336 nt-3.59□□□□□ -2.98
CGR1P53188 YBL071C-BYBL071C-B 99 nt-3.59□□□□□ -2.98
CGR1P53188 YOL164W-AYOL164W-A 183 nt-3.68□□□□□ -3
CGR1P53188 Q0142Q0142 177 nt-3.76□□□□□ -3.01
CGR1P53188 YOL166W-AYOL166W-A 156 nt-3.78□□□□□ -3.01
CGR1P53188 YAL037C-AYAL037C-A 93 nt-3.81□□□□□ -3.02
CGR1P53188 YOR335W-AYOR335W-A 81 nt-3.82□□□□□ -3.02
CGR1P53188 YMR046W-AYMR046W-A 129 nt-3.84□□□□□ -3.02
CGR1P53188 snR47snR47 99 nt-3.85□□□□□ -3.03
CGR1P53188 snR73snR73 106 nt-3.86□□□□□ -3.03
CGR1P53188 RPL41BYDL133C-A 78 nt-3.94□□□□□ -3.04
CGR1P53188 YBL100W-CYBL100W-C 120 nt-3.96□□□□□ -3.04
CGR1P53188 YCL001W-BYCL001W-B 255 nt-3.99□□□□□ -3.05
CGR1P53188 YDR524C-AYDR524C-A 120 nt-4.01□□□□□ -3.05
CGR1P53188 SPG3YDR504C 384 nt-4.1□□□□□ -3.07
CGR1P53188 tV(UAC)QtV(UAC)Q 76 nt-4.11□□□□□ -3.07
CGR1P53188 YKL225WYKL225W 348 nt-4.16□□□□□ -3.08
CGR1P53188 YDL114W-AYDL114W-A 114 nt-4.17□□□□□ -3.08
CGR1P53188 tS(GCU)Q1tS(GCU)Q1 86 nt-4.26□□□□□ -3.09
CGR1P53188 snR85snR85 171 nt-4.3□□□□□ -3.1
CGR1P53188 YJR162CYJR162C 351 nt-4.3□□□□□ -3.1
CGR1P53188 YNL337WYNL337W 255 nt-4.3□□□□□ -3.1
CGR1P53188 tM(CAU)Q1tM(CAU)Q1 76 nt-4.32□□□□□ -3.1
CGR1P53188 YLR466C-BYLR466C-B 117 nt-4.35□□□□□ -3.11
CGR1P53188 YNL338WYNL338W 159 nt-4.54□□□□□ -3.14
CGR1P53188 snR87snR87 109 nt-4.66□□□□□ -3.16
Retrieved 100 of 7,029 protein–RNA pairs in 23 ms