Protein–RNA interactions for Protein: P53078

SDT1, Suppressor of disruption of TFIIS, yeastyeast

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDT1P53078 YNL054W-BYNL054W-B 5250 nt0.59□□□□□ -2.31
SDT1P53078 BUL2YML111W 2763 nt0.59□□□□□ -2.32
SDT1P53078 CSE1YGL238W 2883 nt0.58□□□□□ -2.32
SDT1P53078 PAU12YGR294W 363 nt0.58□□□□□ -2.32
SDT1P53078 YPR159C-AYPR159C-A 102 nt0.58□□□□□ -2.32
SDT1P53078 ORC3YLL004W 1851 nt0.57□□□□□ -2.32
SDT1P53078 YDR371C-AYDR371C-A 105 nt0.57□□□□□ -2.32
SDT1P53078 YNL266WYNL266W 420 nt0.57□□□□□ -2.32
SDT1P53078 YBR178WYBR178W 375 nt0.57□□□□□ -2.32
SDT1P53078 ULP2YIL031W 3105 nt0.57□□□□□ -2.32
SDT1P53078 NIP1YMR309C 2439 nt0.56□□□□□ -2.32
SDT1P53078 RPS26AYGL189C 360 nt0.56□□□□□ -2.32
SDT1P53078 YBL109WYBL109W 336 nt0.56□□□□□ -2.32
SDT1P53078 TFB5YDR079C-A 219 nt0.55□□□□□ -2.32
SDT1P53078 UTP10YJL109C 5310 nt0.54□□□□□ -2.32
SDT1P53078 PET111YMR257C 2403 nt0.54□□□□□ -2.32
SDT1P53078 UTP20YBL004W 7482 nt0.54□□□□□ -2.32
SDT1P53078 EST1YLR233C 2100 nt0.53□□□□□ -2.32
SDT1P53078 tF(GAA)BtF(GAA)B 73 nt0.52□□□□□ -2.33
SDT1P53078 tF(GAA)FtF(GAA)F 73 nt0.52□□□□□ -2.33
SDT1P53078 tF(GAA)GtF(GAA)G 73 nt0.52□□□□□ -2.33
SDT1P53078 tF(GAA)H1tF(GAA)H1 73 nt0.52□□□□□ -2.33
SDT1P53078 tF(GAA)H2tF(GAA)H2 73 nt0.52□□□□□ -2.33
SDT1P53078 tF(GAA)MtF(GAA)M 73 nt0.52□□□□□ -2.33
SDT1P53078 tF(GAA)P1tF(GAA)P1 73 nt0.52□□□□□ -2.33
SDT1P53078 tF(GAA)P2tF(GAA)P2 73 nt0.52□□□□□ -2.33
SDT1P53078 SEC10YLR166C 2616 nt0.51□□□□□ -2.33
SDT1P53078 snR61snR61 90 nt0.5□□□□□ -2.33
SDT1P53078 snR69snR69 101 nt0.49□□□□□ -2.33
SDT1P53078 YGL041C-BYGL041C-B 183 nt0.49□□□□□ -2.33
SDT1P53078 YPL060C-AYPL060C-A 3315 nt0.48□□□□□ -2.33
SDT1P53078 snR81snR81 201 nt0.47□□□□□ -2.33
SDT1P53078 SBH1YER087C-B 249 nt0.47□□□□□ -2.33
SDT1P53078 YKL145W-AYKL145W-A 93 nt0.46□□□□□ -2.34
SDT1P53078 tD(GUC)QtD(GUC)Q 75 nt0.45□□□□□ -2.34
SDT1P53078 YBR196C-AYBR196C-A 150 nt0.45□□□□□ -2.34
SDT1P53078 IQG1YPL242C 4488 nt0.44□□□□□ -2.34
SDT1P53078 YDR524C-AYDR524C-A 120 nt0.44□□□□□ -2.34
SDT1P53078 YLR286W-AYLR286W-A 135 nt0.43□□□□□ -2.34
SDT1P53078 YOL083C-AYOL083C-A 141 nt0.43□□□□□ -2.34
SDT1P53078 RPM2YML091C 3609 nt0.42□□□□□ -2.34
SDT1P53078 YBL100W-BYBL100W-B 5313 nt0.41□□□□□ -2.34
SDT1P53078 YMR326CYMR326C 309 nt0.41□□□□□ -2.34
SDT1P53078 YBL071C-BYBL071C-B 99 nt0.41□□□□□ -2.34
SDT1P53078 MLP2YIL149C 5040 nt0.4□□□□□ -2.35
SDT1P53078 RDS3YPR094W 324 nt0.39□□□□□ -2.35
SDT1P53078 FMP27YLR454W 7887 nt0.39□□□□□ -2.35
SDT1P53078 tQ(UUG)QtQ(UUG)Q 76 nt0.38□□□□□ -2.35
SDT1P53078 YHR217CYHR217C 462 nt0.38□□□□□ -2.35
SDT1P53078 YAL037C-AYAL037C-A 93 nt0.38□□□□□ -2.35
SDT1P53078 THO2YNL139C 4794 nt0.38□□□□□ -2.35
SDT1P53078 YDL159C-BYDL159C-B 177 nt0.37□□□□□ -2.35
SDT1P53078 YOL014WYOL014W 375 nt0.36□□□□□ -2.35
SDT1P53078 tS(GCU)Q1tS(GCU)Q1 86 nt0.34□□□□□ -2.36
SDT1P53078 snR50snR50 90 nt0.34□□□□□ -2.36
SDT1P53078 AI1Q0050 2505 nt0.33□□□□□ -2.36
SDT1P53078 YJL077W-AYJL077W-A 87 nt0.33□□□□□ -2.36
SDT1P53078 YLR299C-AYLR299C-A 93 nt0.33□□□□□ -2.36
SDT1P53078 YOL164W-AYOL164W-A 183 nt0.31□□□□□ -2.36
SDT1P53078 YER090C-AYER090C-A 90 nt0.28□□□□□ -2.36
SDT1P53078 YML054C-AYML054C-A 159 nt0.27□□□□□ -2.37
SDT1P53078 SOV1YMR066W 2697 nt0.26□□□□□ -2.37
SDT1P53078 snR47snR47 99 nt0.24□□□□□ -2.37
SDT1P53078 YOR186C-AYOR186C-A 210 nt0.23□□□□□ -2.37
SDT1P53078 MLP1YKR095W 5628 nt0.23□□□□□ -2.37
SDT1P53078 ESP1YGR098C 4893 nt0.22□□□□□ -2.37
SDT1P53078 YGR240C-AYGR240C-A 201 nt0.22□□□□□ -2.37
SDT1P53078 snR45snR45 172 nt0.2□□□□□ -2.38
SDT1P53078 snR62snR62 100 nt0.19□□□□□ -2.38
SDT1P53078 YLL066W-BYLL066W-B 171 nt0.18□□□□□ -2.38
SDT1P53078 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
SDT1P53078 YDR034C-AYDR034C-A 177 nt0.17□□□□□ -2.38
SDT1P53078 YHR180C-BYHR180C-B 105 nt0.17□□□□□ -2.38
SDT1P53078 YBR109W-AYBR109W-A 225 nt0.17□□□□□ -2.38
SDT1P53078 YDL247W-AYDL247W-A 75 nt0.14□□□□□ -2.39
SDT1P53078 YBL100W-CYBL100W-C 120 nt0.14□□□□□ -2.39
SDT1P53078 snR38snR38 95 nt0.14□□□□□ -2.39
SDT1P53078 YML100W-AYML100W-A 174 nt0.13□□□□□ -2.39
SDT1P53078 YER078W-AYER078W-A 165 nt0.12□□□□□ -2.39
SDT1P53078 snR128snR128 126 nt0.12□□□□□ -2.39
SDT1P53078 snR67snR67 82 nt0.11□□□□□ -2.39
SDT1P53078 RPL41AYDL184C 78 nt0.08□□□□□ -2.4
SDT1P53078 SKI7YOR076C 2244 nt0.07□□□□□ -2.4
SDT1P53078 YBR296C-AYBR296C-A 120 nt0.05□□□□□ -2.4
SDT1P53078 YKL225WYKL225W 348 nt0.03□□□□□ -2.4
SDT1P53078 PAU9YBL108C-A 129 nt-0.04□□□□□ -2.42
SDT1P53078 snR64snR64 101 nt-0.07□□□□□ -2.42
SDT1P53078 YDL159W-AYDL159W-A 132 nt-0.09□□□□□ -2.42
SDT1P53078 tA(UGC)QtA(UGC)Q 76 nt-0.12□□□□□ -2.43
SDT1P53078 YOR376W-AYOR376W-A 156 nt-0.14□□□□□ -2.43
SDT1P53078 YKL106C-AYKL106C-A 120 nt-0.16□□□□□ -2.44
SDT1P53078 SBH2YER019C-A 267 nt-0.17□□□□□ -2.44
SDT1P53078 snR53snR53 91 nt-0.21□□□□□ -2.44
SDT1P53078 YGR122C-AYGR122C-A 129 nt-0.23□□□□□ -2.45
SDT1P53078 YJL113WYJL113W 4647 nt-0.26□□□□□ -2.45
SDT1P53078 snR161snR161 161 nt-0.29□□□□□ -2.46
SDT1P53078 YOR316C-AYOR316C-A 210 nt-0.32□□□□□ -2.46
SDT1P53078 YDL114W-AYDL114W-A 114 nt-0.38□□□□□ -2.47
SDT1P53078 tV(UAC)QtV(UAC)Q 76 nt-0.38□□□□□ -2.47
SDT1P53078 snR77snR77 88 nt-0.4□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 63.5 ms