Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF144AP50876 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF144AP50876 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF144AP50876 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF144AP50876 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF144AP50876 AL121832.2-201ENST00000610979 668 ntBASIC18.5■□□□□ 0.55
RNF144AP50876 AL589743.5-201ENST00000616611 1050 ntBASIC18.5■□□□□ 0.55
RNF144AP50876 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF144AP50876 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RNF144AP50876 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF144AP50876 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF144AP50876 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF144AP50876 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF144AP50876 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF144AP50876 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF144AP50876 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF144AP50876 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF144AP50876 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF144AP50876 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF144AP50876 GUSBP6-202ENST00000438529 1198 ntBASIC18.49■□□□□ 0.55
RNF144AP50876 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF144AP50876 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF144AP50876 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF144AP50876 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF144AP50876 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF144AP50876 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF144AP50876 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF144AP50876 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF144AP50876 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF144AP50876 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF144AP50876 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF144AP50876 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF144AP50876 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 MIPEPP3-201ENST00000412105 444 ntBASIC18.48■□□□□ 0.55
RNF144AP50876 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF144AP50876 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF144AP50876 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF144AP50876 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.48■□□□□ 0.55
RNF144AP50876 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF144AP50876 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF144AP50876 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
RNF144AP50876 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF144AP50876 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF144AP50876 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF144AP50876 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF144AP50876 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF144AP50876 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF144AP50876 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF144AP50876 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF144AP50876 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF144AP50876 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF144AP50876 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF144AP50876 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF144AP50876 AL512625.2-201ENST00000417533 625 ntBASIC18.47■□□□□ 0.55
RNF144AP50876 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF144AP50876 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF144AP50876 AL138781.1-201ENST00000566567 1274 ntBASIC18.47■□□□□ 0.55
RNF144AP50876 PTBP1P-201ENST00000554374 1601 ntBASIC18.47■□□□□ 0.55
RNF144AP50876 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF144AP50876 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF144AP50876 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF144AP50876 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF144AP50876 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF144AP50876 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF144AP50876 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF144AP50876 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF144AP50876 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF144AP50876 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RNF144AP50876 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF144AP50876 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms