Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LHX2P50458 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX2P50458 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LHX2P50458 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LHX2P50458 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LHX2P50458 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX2P50458 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX2P50458 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX2P50458 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LHX2P50458 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX2P50458 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX2P50458 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.83■□□□□ 0.45
LHX2P50458 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX2P50458 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.83■□□□□ 0.44
LHX2P50458 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LHX2P50458 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX2P50458 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.83■□□□□ 0.44
LHX2P50458 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LHX2P50458 RPS2P4-201ENST00000476944 856 ntBASIC17.83■□□□□ 0.44
LHX2P50458 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.83■□□□□ 0.44
LHX2P50458 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.83■□□□□ 0.44
LHX2P50458 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX2P50458 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.83■□□□□ 0.44
LHX2P50458 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.83■□□□□ 0.44
LHX2P50458 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LHX2P50458 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LHX2P50458 BX119927.1-201ENST00000636596 1552 ntBASIC17.83■□□□□ 0.44
LHX2P50458 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX2P50458 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 NBPF21P-201ENST00000425093 1451 ntBASIC17.82■□□□□ 0.44
LHX2P50458 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.82■□□□□ 0.44
LHX2P50458 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LHX2P50458 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 PKD1P6-201ENST00000343738 4769 ntBASIC17.82■□□□□ 0.44
LHX2P50458 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.82■□□□□ 0.44
LHX2P50458 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.82■□□□□ 0.44
LHX2P50458 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.82■□□□□ 0.44
LHX2P50458 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.82■□□□□ 0.44
LHX2P50458 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.82■□□□□ 0.44
LHX2P50458 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LHX2P50458 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LHX2P50458 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
LHX2P50458 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 GABARAPL3-202ENST00000624044 1851 ntBASIC17.82■□□□□ 0.44
LHX2P50458 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX2P50458 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 AL512408.1-201ENST00000569378 2000 ntBASIC17.81■□□□□ 0.44
LHX2P50458 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX2P50458 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.81■□□□□ 0.44
LHX2P50458 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.81■□□□□ 0.44
LHX2P50458 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LHX2P50458 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX2P50458 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.81■□□□□ 0.44
LHX2P50458 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 AC116351.2-201ENST00000606540 1585 ntBASIC17.81■□□□□ 0.44
LHX2P50458 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.81■□□□□ 0.44
LHX2P50458 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LHX2P50458 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LHX2P50458 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX2P50458 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX2P50458 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX2P50458 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX2P50458 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX2P50458 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX2P50458 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LHX2P50458 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX2P50458 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX2P50458 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LHX2P50458 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LHX2P50458 MIR718-201ENST00000390190 70 ntBASIC17.8■□□□□ 0.44
LHX2P50458 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX2P50458 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX2P50458 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LHX2P50458 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX2P50458 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX2P50458 Z99916.2-201ENST00000604037 246 ntBASIC17.8■□□□□ 0.44
LHX2P50458 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.8■□□□□ 0.44
LHX2P50458 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
LHX2P50458 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LHX2P50458 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.8■□□□□ 0.44
LHX2P50458 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LHX2P50458 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms