Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SRP9P49458 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.64■□□□□ 0.41
SRP9P49458 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SRP9P49458 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.64■□□□□ 0.41
SRP9P49458 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.64■□□□□ 0.41
SRP9P49458 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.64■□□□□ 0.41
SRP9P49458 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.64■□□□□ 0.41
SRP9P49458 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.64■□□□□ 0.41
SRP9P49458 AC080038.1-201ENST00000611274 1154 ntBASIC17.64■□□□□ 0.41
SRP9P49458 AC231657.2-201ENST00000624556 255 ntBASIC17.64■□□□□ 0.41
SRP9P49458 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.64■□□□□ 0.41
SRP9P49458 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.63■□□□□ 0.41
SRP9P49458 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.63■□□□□ 0.41
SRP9P49458 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SRP9P49458 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SRP9P49458 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.63■□□□□ 0.41
SRP9P49458 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.63■□□□□ 0.41
SRP9P49458 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.63■□□□□ 0.41
SRP9P49458 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.63■□□□□ 0.41
SRP9P49458 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SRP9P49458 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRP9P49458 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SRP9P49458 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.62■□□□□ 0.41
SRP9P49458 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.62■□□□□ 0.41
SRP9P49458 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.62■□□□□ 0.41
SRP9P49458 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.62■□□□□ 0.41
SRP9P49458 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SRP9P49458 RARRES2P11-201ENST00000635158 484 ntBASIC17.62■□□□□ 0.41
SRP9P49458 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SRP9P49458 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SRP9P49458 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SRP9P49458 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.62■□□□□ 0.41
SRP9P49458 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.62■□□□□ 0.41
SRP9P49458 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.62■□□□□ 0.41
SRP9P49458 NEFHP1-201ENST00000412845 2629 ntBASIC17.62■□□□□ 0.41
SRP9P49458 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SRP9P49458 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.62■□□□□ 0.41
SRP9P49458 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SRP9P49458 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SRP9P49458 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SRP9P49458 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP9P49458 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.61■□□□□ 0.41
SRP9P49458 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
SRP9P49458 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.61■□□□□ 0.41
SRP9P49458 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 AC007322.1-201ENST00000426983 750 ntBASIC17.61■□□□□ 0.41
SRP9P49458 AC007322.4-201ENST00000509611 723 ntBASIC17.61■□□□□ 0.41
SRP9P49458 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.61■□□□□ 0.41
SRP9P49458 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.61■□□□□ 0.41
SRP9P49458 DUX4L16-201ENST00000555130 1264 ntBASIC17.61■□□□□ 0.41
SRP9P49458 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.61■□□□□ 0.41
SRP9P49458 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.61■□□□□ 0.41
SRP9P49458 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP9P49458 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms