Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YNL324WYNL324W 396 nt-2.38□□□□□ -2.79
TY1B-JR1P47098 ATP19YOL077W-A 207 nt-2.38□□□□□ -2.79
TY1B-JR1P47098 YAL016C-BYAL016C-B 186 nt-2.39□□□□□ -2.79
TY1B-JR1P47098 YBR178WYBR178W 375 nt-2.41□□□□□ -2.79
TY1B-JR1P47098 YMR001C-AYMR001C-A 231 nt-2.44□□□□□ -2.8
TY1B-JR1P47098 snR41snR41 95 nt-2.46□□□□□ -2.8
TY1B-JR1P47098 YOR381W-AYOR381W-A 168 nt-2.48□□□□□ -2.81
TY1B-JR1P47098 YOR329W-AYOR329W-A 210 nt-2.49□□□□□ -2.81
TY1B-JR1P47098 YEL014CYEL014C 306 nt-2.49□□□□□ -2.81
TY1B-JR1P47098 YLR406C-AYLR406C-A 150 nt-2.5□□□□□ -2.81
TY1B-JR1P47098 YLR299C-AYLR299C-A 93 nt-2.51□□□□□ -2.81
TY1B-JR1P47098 snR55snR55 98 nt-2.54□□□□□ -2.82
TY1B-JR1P47098 YLR434CYLR434C 384 nt-2.56□□□□□ -2.82
TY1B-JR1P47098 snR78snR78 87 nt-2.57□□□□□ -2.82
TY1B-JR1P47098 YGL041CYGL041C 204 nt-2.59□□□□□ -2.82
TY1B-JR1P47098 YER181CYER181C 324 nt-2.59□□□□□ -2.82
TY1B-JR1P47098 YLR120W-AYLR120W-A 102 nt-2.59□□□□□ -2.82
TY1B-JR1P47098 YOL038C-AYOL038C-A 96 nt-2.6□□□□□ -2.83
TY1B-JR1P47098 snR80snR80 171 nt-2.61□□□□□ -2.83
TY1B-JR1P47098 tW(UCA)QtW(UCA)Q 74 nt-2.62□□□□□ -2.83
TY1B-JR1P47098 YPR012WYPR012W 255 nt-2.66□□□□□ -2.84
TY1B-JR1P47098 YOL155W-AYOL155W-A 135 nt-2.67□□□□□ -2.84
TY1B-JR1P47098 STE18YJR086W 333 nt-2.69□□□□□ -2.84
TY1B-JR1P47098 snR6snR6 112 nt-2.7□□□□□ -2.84
TY1B-JR1P47098 HTL1YCR020W-B 237 nt-2.71□□□□□ -2.84
TY1B-JR1P47098 YJR162CYJR162C 351 nt-2.74□□□□□ -2.85
TY1B-JR1P47098 YKL106C-AYKL106C-A 120 nt-2.74□□□□□ -2.85
TY1B-JR1P47098 YNL337WYNL337W 255 nt-2.74□□□□□ -2.85
TY1B-JR1P47098 YDR524C-AYDR524C-A 120 nt-2.74□□□□□ -2.85
TY1B-JR1P47098 BIL1YOR304C-A 231 nt-2.76□□□□□ -2.85
TY1B-JR1P47098 YLR222C-AYLR222C-A 231 nt-2.78□□□□□ -2.85
TY1B-JR1P47098 YOR102WYOR102W 351 nt-2.79□□□□□ -2.86
TY1B-JR1P47098 Q0255Q0255 1419 nt-2.82□□□□□ -2.86
TY1B-JR1P47098 YKL118WYKL118W 312 nt-2.83□□□□□ -2.86
TY1B-JR1P47098 YNL122CYNL122C 348 nt-2.84□□□□□ -2.86
TY1B-JR1P47098 RPL41AYDL184C 78 nt-2.84□□□□□ -2.86
TY1B-JR1P47098 snR73snR73 106 nt-2.85□□□□□ -2.87
TY1B-JR1P47098 YKL123WYKL123W 381 nt-2.85□□□□□ -2.87
TY1B-JR1P47098 YOR335W-AYOR335W-A 81 nt-2.85□□□□□ -2.87
TY1B-JR1P47098 YDR413CYDR413C 576 nt-2.86□□□□□ -2.87
TY1B-JR1P47098 YBR131C-AYBR131C-A 90 nt-2.86□□□□□ -2.87
TY1B-JR1P47098 YJL150WYJL150W 303 nt-2.88□□□□□ -2.87
TY1B-JR1P47098 RPL41BYDL133C-A 78 nt-2.93□□□□□ -2.88
TY1B-JR1P47098 YLR285C-AYLR285C-A 171 nt-2.95□□□□□ -2.88
TY1B-JR1P47098 YBR109W-AYBR109W-A 225 nt-2.97□□□□□ -2.88
TY1B-JR1P47098 snR38snR38 95 nt-2.97□□□□□ -2.88
TY1B-JR1P47098 tF(GAA)QtF(GAA)Q 75 nt-2.98□□□□□ -2.89
TY1B-JR1P47098 YDR183C-AYDR183C-A 258 nt-2.99□□□□□ -2.89
TY1B-JR1P47098 YBR296C-AYBR296C-A 120 nt-3□□□□□ -2.89
TY1B-JR1P47098 GIM4YEL003W 336 nt-3.02□□□□□ -2.89
TY1B-JR1P47098 YAL063C-AYAL063C-A 291 nt-3.02□□□□□ -2.89
TY1B-JR1P47098 YGL188C-AYGL188C-A 141 nt-3.02□□□□□ -2.89
TY1B-JR1P47098 snR48snR48 113 nt-3.03□□□□□ -2.89
TY1B-JR1P47098 YNL198CYNL198C 303 nt-3.06□□□□□ -2.9
TY1B-JR1P47098 tL(UAA)QtL(UAA)Q 85 nt-3.07□□□□□ -2.9
TY1B-JR1P47098 YGR035CYGR035C 351 nt-3.07□□□□□ -2.9
TY1B-JR1P47098 YDR406W-AYDR406W-A 246 nt-3.07□□□□□ -2.9
TY1B-JR1P47098 YPL038W-AYPL038W-A 192 nt-3.08□□□□□ -2.9
TY1B-JR1P47098 snR56snR56 88 nt-3.14□□□□□ -2.91
TY1B-JR1P47098 YNL097C-BYNL097C-B 123 nt-3.15□□□□□ -2.91
TY1B-JR1P47098 tV(UAC)QtV(UAC)Q 76 nt-3.23□□□□□ -2.93
TY1B-JR1P47098 RPL39YJL189W 156 nt-3.24□□□□□ -2.93
TY1B-JR1P47098 snR87snR87 109 nt-3.25□□□□□ -2.93
TY1B-JR1P47098 snR85snR85 171 nt-3.29□□□□□ -2.94
TY1B-JR1P47098 YDL114W-AYDL114W-A 114 nt-3.3□□□□□ -2.94
TY1B-JR1P47098 YOR302WYOR302W 78 nt-3.31□□□□□ -2.94
TY1B-JR1P47098 YNR025CYNR025C 360 nt-3.33□□□□□ -2.94
TY1B-JR1P47098 YHL015W-AYHL015W-A 84 nt-3.36□□□□□ -2.95
TY1B-JR1P47098 SOM1YEL059C-A 225 nt-3.38□□□□□ -2.95
TY1B-JR1P47098 snR47snR47 99 nt-3.38□□□□□ -2.95
TY1B-JR1P47098 snR52snR52 92 nt-3.38□□□□□ -2.95
TY1B-JR1P47098 YBL071C-BYBL071C-B 99 nt-3.39□□□□□ -2.95
TY1B-JR1P47098 YCR095W-AYCR095W-A 159 nt-3.43□□□□□ -2.96
TY1B-JR1P47098 YOL164W-AYOL164W-A 183 nt-3.44□□□□□ -2.96
TY1B-JR1P47098 YGR151CYGR151C 336 nt-3.45□□□□□ -2.96
TY1B-JR1P47098 snR58snR58 96 nt-3.48□□□□□ -2.97
TY1B-JR1P47098 YNL277W-AYNL277W-A 189 nt-3.49□□□□□ -2.97
TY1B-JR1P47098 YDR157WYDR157W 402 nt-3.52□□□□□ -2.97
TY1B-JR1P47098 YDL240C-AYDL240C-A 138 nt-3.64□□□□□ -2.99
TY1B-JR1P47098 YBL053WYBL053W 375 nt-3.64□□□□□ -2.99
TY1B-JR1P47098 YKL225WYKL225W 348 nt-3.65□□□□□ -2.99
TY1B-JR1P47098 YJL136W-AYJL136W-A 84 nt-3.66□□□□□ -3
TY1B-JR1P47098 YHR175W-AYHR175W-A 150 nt-3.67□□□□□ -3
TY1B-JR1P47098 tS(GCU)Q1tS(GCU)Q1 86 nt-3.69□□□□□ -3
TY1B-JR1P47098 tR(UCU)Q1tR(UCU)Q1 73 nt-3.7□□□□□ -3
TY1B-JR1P47098 YDR118W-AYDR118W-A 117 nt-3.71□□□□□ -3
TY1B-JR1P47098 YAL037C-AYAL037C-A 93 nt-3.74□□□□□ -3.01
TY1B-JR1P47098 SPG3YDR504C 384 nt-3.74□□□□□ -3.01
TY1B-JR1P47098 YKL096C-BYKL096C-B 150 nt-3.75□□□□□ -3.01
TY1B-JR1P47098 YDL159W-AYDL159W-A 132 nt-3.79□□□□□ -3.02
TY1B-JR1P47098 YBL100W-CYBL100W-C 120 nt-3.8□□□□□ -3.02
TY1B-JR1P47098 YGR122C-AYGR122C-A 129 nt-3.82□□□□□ -3.02
TY1B-JR1P47098 YEL050W-AYEL050W-A 192 nt-3.83□□□□□ -3.02
TY1B-JR1P47098 YPL152W-AYPL152W-A 99 nt-3.91□□□□□ -3.03
TY1B-JR1P47098 YDR034C-AYDR034C-A 177 nt-4.03□□□□□ -3.05
TY1B-JR1P47098 snR65snR65 100 nt-4.04□□□□□ -3.06
TY1B-JR1P47098 YNL170WYNL170W 396 nt-4.09□□□□□ -3.06
TY1B-JR1P47098 Q0017Q0017 162 nt-4.18□□□□□ -3.08
TY1B-JR1P47098 tC(GCA)QtC(GCA)Q 76 nt-4.2□□□□□ -3.08
TY1B-JR1P47098 YGL007C-AYGL007C-A 87 nt-4.28□□□□□ -3.09
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms