Protein–RNA interactions for Protein: P47093

LSM8, U6 snRNA-associated Sm-like protein LSm8, yeastyeast

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM8P47093 YLR286W-AYLR286W-A 135 nt-1.92□□□□□ -2.72
LSM8P47093 YOR008C-AYOR008C-A 225 nt-1.92□□□□□ -2.72
LSM8P47093 YBR182C-AYBR182C-A 195 nt-1.92□□□□□ -2.72
LSM8P47093 CDC65tQ(CUG)M 72 nt-1.94□□□□□ -2.72
LSM8P47093 YML054C-AYML054C-A 159 nt-1.94□□□□□ -2.72
LSM8P47093 YNL205CYNL205C 423 nt-1.98□□□□□ -2.73
LSM8P47093 YJR157WYJR157W 363 nt-1.99□□□□□ -2.73
LSM8P47093 YOR329W-AYOR329W-A 210 nt-2□□□□□ -2.73
LSM8P47093 YBR178WYBR178W 375 nt-2□□□□□ -2.73
LSM8P47093 YGR240C-AYGR240C-A 201 nt-2.01□□□□□ -2.73
LSM8P47093 YNR077CYNR077C 255 nt-2.01□□□□□ -2.73
LSM8P47093 snR77snR77 88 nt-2.02□□□□□ -2.73
LSM8P47093 YDL159C-BYDL159C-B 177 nt-2.03□□□□□ -2.73
LSM8P47093 YBR131C-AYBR131C-A 90 nt-2.03□□□□□ -2.73
LSM8P47093 tF(GAA)QtF(GAA)Q 75 nt-2.07□□□□□ -2.74
LSM8P47093 YAL016C-BYAL016C-B 186 nt-2.09□□□□□ -2.74
LSM8P47093 YER181CYER181C 324 nt-2.12□□□□□ -2.75
LSM8P47093 YPR197CYPR197C 564 nt-2.13□□□□□ -2.75
LSM8P47093 YPL038W-AYPL038W-A 192 nt-2.14□□□□□ -2.75
LSM8P47093 snR81snR81 201 nt-2.16□□□□□ -2.76
LSM8P47093 YMR315W-AYMR315W-A 108 nt-2.16□□□□□ -2.76
LSM8P47093 YDR413CYDR413C 576 nt-2.21□□□□□ -2.76
LSM8P47093 YLR222C-AYLR222C-A 231 nt-2.23□□□□□ -2.77
LSM8P47093 YNL097C-BYNL097C-B 123 nt-2.24□□□□□ -2.77
LSM8P47093 RPL39YJL189W 156 nt-2.25□□□□□ -2.77
LSM8P47093 YNL277W-AYNL277W-A 189 nt-2.26□□□□□ -2.77
LSM8P47093 YLR299C-AYLR299C-A 93 nt-2.27□□□□□ -2.77
LSM8P47093 snR55snR55 98 nt-2.31□□□□□ -2.78
LSM8P47093 YOR376W-AYOR376W-A 156 nt-2.32□□□□□ -2.78
LSM8P47093 snR48snR48 113 nt-2.32□□□□□ -2.78
LSM8P47093 YDR157WYDR157W 402 nt-2.33□□□□□ -2.78
LSM8P47093 YBR196C-AYBR196C-A 150 nt-2.34□□□□□ -2.78
LSM8P47093 YOR102WYOR102W 351 nt-2.35□□□□□ -2.79
LSM8P47093 tL(UAA)QtL(UAA)Q 85 nt-2.38□□□□□ -2.79
LSM8P47093 YGL188C-AYGL188C-A 141 nt-2.38□□□□□ -2.79
LSM8P47093 YBR126W-BYBR126W-B 144 nt-2.38□□□□□ -2.79
LSM8P47093 YDL240C-AYDL240C-A 138 nt-2.39□□□□□ -2.79
LSM8P47093 YKL118WYKL118W 312 nt-2.41□□□□□ -2.8
LSM8P47093 YOR302WYOR302W 78 nt-2.49□□□□□ -2.81
LSM8P47093 YDR118W-AYDR118W-A 117 nt-2.51□□□□□ -2.81
LSM8P47093 Q0017Q0017 162 nt-2.52□□□□□ -2.81
LSM8P47093 YOL155W-AYOL155W-A 135 nt-2.53□□□□□ -2.81
LSM8P47093 YOR309CYOR309C 381 nt-2.53□□□□□ -2.81
LSM8P47093 GIM4YEL003W 336 nt-2.54□□□□□ -2.82
LSM8P47093 YHR180C-BYHR180C-B 105 nt-2.55□□□□□ -2.82
LSM8P47093 YOR316C-AYOR316C-A 210 nt-2.56□□□□□ -2.82
LSM8P47093 snR52snR52 92 nt-2.59□□□□□ -2.82
LSM8P47093 YHL015W-AYHL015W-A 84 nt-2.61□□□□□ -2.83
LSM8P47093 YLR342W-AYLR342W-A 174 nt-2.63□□□□□ -2.83
LSM8P47093 YKL106C-AYKL106C-A 120 nt-2.64□□□□□ -2.83
LSM8P47093 YPR012WYPR012W 255 nt-2.65□□□□□ -2.83
LSM8P47093 YJL150WYJL150W 303 nt-2.69□□□□□ -2.84
LSM8P47093 YPL152W-AYPL152W-A 99 nt-2.7□□□□□ -2.84
LSM8P47093 VAR1Q0140 1197 nt-2.75□□□□□ -2.85
LSM8P47093 YNL198CYNL198C 303 nt-2.8□□□□□ -2.86
LSM8P47093 snR65snR65 100 nt-2.82□□□□□ -2.86
LSM8P47093 YBR109W-AYBR109W-A 225 nt-2.83□□□□□ -2.86
LSM8P47093 snR56snR56 88 nt-2.9□□□□□ -2.87
LSM8P47093 YDR524W-CYDR524W-C 90 nt-2.92□□□□□ -2.88
LSM8P47093 SOM1YEL059C-A 225 nt-2.93□□□□□ -2.88
LSM8P47093 YBR296C-AYBR296C-A 120 nt-2.93□□□□□ -2.88
LSM8P47093 RPL41AYDL184C 78 nt-2.97□□□□□ -2.88
LSM8P47093 snR80snR80 171 nt-2.99□□□□□ -2.89
LSM8P47093 snR6snR6 112 nt-3□□□□□ -2.89
LSM8P47093 YOL083C-AYOL083C-A 141 nt-3.04□□□□□ -2.9
LSM8P47093 snR38snR38 95 nt-3.04□□□□□ -2.9
LSM8P47093 YBL053WYBL053W 375 nt-3.07□□□□□ -2.9
LSM8P47093 YCR095W-AYCR095W-A 159 nt-3.11□□□□□ -2.91
LSM8P47093 YOR335W-AYOR335W-A 81 nt-3.15□□□□□ -2.91
LSM8P47093 YDR543CYDR543C 300 nt-3.16□□□□□ -2.92
LSM8P47093 snR73snR73 106 nt-3.18□□□□□ -2.92
LSM8P47093 YDR406W-AYDR406W-A 246 nt-3.18□□□□□ -2.92
LSM8P47093 YOR231C-AYOR231C-A 201 nt-3.21□□□□□ -2.92
LSM8P47093 YBL071C-BYBL071C-B 99 nt-3.22□□□□□ -2.92
LSM8P47093 YGR151CYGR151C 336 nt-3.24□□□□□ -2.93
LSM8P47093 RPL41BYDL133C-A 78 nt-3.27□□□□□ -2.93
LSM8P47093 YOL164W-AYOL164W-A 183 nt-3.29□□□□□ -2.94
LSM8P47093 YHR175W-AYHR175W-A 150 nt-3.35□□□□□ -2.95
LSM8P47093 snR47snR47 99 nt-3.37□□□□□ -2.95
LSM8P47093 YAL037C-AYAL037C-A 93 nt-3.47□□□□□ -2.96
LSM8P47093 tR(ACG)Q2tR(ACG)Q2 74 nt-3.48□□□□□ -2.97
LSM8P47093 YBL100W-CYBL100W-C 120 nt-3.53□□□□□ -2.97
LSM8P47093 tV(UAC)QtV(UAC)Q 76 nt-3.56□□□□□ -2.98
LSM8P47093 YDL114W-AYDL114W-A 114 nt-3.57□□□□□ -2.98
LSM8P47093 Q0144Q0144 330 nt-3.6□□□□□ -2.99
LSM8P47093 YKL225WYKL225W 348 nt-3.64□□□□□ -2.99
LSM8P47093 YCL001W-BYCL001W-B 255 nt-3.64□□□□□ -2.99
LSM8P47093 snR85snR85 171 nt-3.65□□□□□ -2.99
LSM8P47093 YDR524C-AYDR524C-A 120 nt-3.65□□□□□ -2.99
LSM8P47093 tS(GCU)Q1tS(GCU)Q1 86 nt-3.7□□□□□ -3
LSM8P47093 SPG3YDR504C 384 nt-3.74□□□□□ -3.01
LSM8P47093 YMR046W-AYMR046W-A 129 nt-3.78□□□□□ -3.01
LSM8P47093 Q0142Q0142 177 nt-3.79□□□□□ -3.02
LSM8P47093 YOL166W-AYOL166W-A 156 nt-3.85□□□□□ -3.03
LSM8P47093 YNL337WYNL337W 255 nt-3.92□□□□□ -3.04
LSM8P47093 snR87snR87 109 nt-4.06□□□□□ -3.06
LSM8P47093 YGR122C-AYGR122C-A 129 nt-4.06□□□□□ -3.06
LSM8P47093 YDL159W-AYDL159W-A 132 nt-4.08□□□□□ -3.06
LSM8P47093 YLR466C-BYLR466C-B 117 nt-4.1□□□□□ -3.07
LSM8P47093 YDR034C-AYDR034C-A 177 nt-4.13□□□□□ -3.07
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms