Protein–RNA interactions for Protein: P46948

SKI6, Exosome complex component SKI6, yeastyeast

Predicted RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKI6P46948 YBR131C-AYBR131C-A 90 nt-1.16□□□□□ -2.6
SKI6P46948 YDL240C-AYDL240C-A 138 nt-1.17□□□□□ -2.6
SKI6P46948 YDR118W-AYDR118W-A 117 nt-1.17□□□□□ -2.6
SKI6P46948 VAR1Q0140 1197 nt-1.17□□□□□ -2.6
SKI6P46948 tF(GAA)QtF(GAA)Q 75 nt-1.18□□□□□ -2.6
SKI6P46948 YFL019CYFL019C 354 nt-1.19□□□□□ -2.6
SKI6P46948 snR39BsnR39B 96 nt-1.19□□□□□ -2.6
SKI6P46948 PMP2YEL017C-A 132 nt-1.2□□□□□ -2.6
SKI6P46948 YGR146C-AYGR146C-A 162 nt-1.21□□□□□ -2.6
SKI6P46948 YKL118WYKL118W 312 nt-1.21□□□□□ -2.6
SKI6P46948 YER181CYER181C 324 nt-1.24□□□□□ -2.61
SKI6P46948 YNL277W-AYNL277W-A 189 nt-1.24□□□□□ -2.61
SKI6P46948 YBR223W-AYBR223W-A 120 nt-1.24□□□□□ -2.61
SKI6P46948 JLP2YMR132C 627 nt-1.26□□□□□ -2.61
SKI6P46948 snR55snR55 98 nt-1.28□□□□□ -2.61
SKI6P46948 YOR329W-AYOR329W-A 210 nt-1.29□□□□□ -2.62
SKI6P46948 YPR012WYPR012W 255 nt-1.32□□□□□ -2.62
SKI6P46948 snR67snR67 82 nt-1.33□□□□□ -2.62
SKI6P46948 tD(GUC)QtD(GUC)Q 75 nt-1.33□□□□□ -2.62
SKI6P46948 GIM4YEL003W 336 nt-1.34□□□□□ -2.62
SKI6P46948 tP(UGG)QtP(UGG)Q 72 nt-1.35□□□□□ -2.63
SKI6P46948 YLR286W-AYLR286W-A 135 nt-1.37□□□□□ -2.63
SKI6P46948 YBR178WYBR178W 375 nt-1.39□□□□□ -2.63
SKI6P46948 SKI7YOR076C 2244 nt-1.42□□□□□ -2.64
SKI6P46948 YNL097C-BYNL097C-B 123 nt-1.42□□□□□ -2.64
SKI6P46948 YOL155W-AYOL155W-A 135 nt-1.44□□□□□ -2.64
SKI6P46948 YDL159C-BYDL159C-B 177 nt-1.45□□□□□ -2.64
SKI6P46948 YNL205CYNL205C 423 nt-1.46□□□□□ -2.64
SKI6P46948 Q0144Q0144 330 nt-1.51□□□□□ -2.65
SKI6P46948 YOR302WYOR302W 78 nt-1.51□□□□□ -2.65
SKI6P46948 snR48snR48 113 nt-1.55□□□□□ -2.66
SKI6P46948 YGL188C-AYGL188C-A 141 nt-1.57□□□□□ -2.66
SKI6P46948 YOR102WYOR102W 351 nt-1.57□□□□□ -2.66
SKI6P46948 snR52snR52 92 nt-1.57□□□□□ -2.66
SKI6P46948 YML054C-AYML054C-A 159 nt-1.58□□□□□ -2.66
SKI6P46948 YPL152W-AYPL152W-A 99 nt-1.58□□□□□ -2.66
SKI6P46948 snR65snR65 100 nt-1.6□□□□□ -2.67
SKI6P46948 tL(UAA)QtL(UAA)Q 85 nt-1.61□□□□□ -2.67
SKI6P46948 YLR342W-AYLR342W-A 174 nt-1.62□□□□□ -2.67
SKI6P46948 YLR299C-AYLR299C-A 93 nt-1.64□□□□□ -2.67
SKI6P46948 YNR077CYNR077C 255 nt-1.67□□□□□ -2.68
SKI6P46948 YHL015W-AYHL015W-A 84 nt-1.7□□□□□ -2.68
SKI6P46948 YBR196C-AYBR196C-A 150 nt-1.7□□□□□ -2.68
SKI6P46948 YHR175W-AYHR175W-A 150 nt-1.72□□□□□ -2.68
SKI6P46948 CDC65tQ(CUG)M 72 nt-1.73□□□□□ -2.69
SKI6P46948 tY(GUA)QtY(GUA)Q 84 nt-1.73□□□□□ -2.69
SKI6P46948 YGR240C-AYGR240C-A 201 nt-1.75□□□□□ -2.69
SKI6P46948 snR77snR77 88 nt-1.77□□□□□ -2.69
SKI6P46948 snR80snR80 171 nt-1.83□□□□□ -2.7
SKI6P46948 tR(ACG)Q2tR(ACG)Q2 74 nt-1.84□□□□□ -2.7
SKI6P46948 snR56snR56 88 nt-1.88□□□□□ -2.71
SKI6P46948 YOR376W-AYOR376W-A 156 nt-1.88□□□□□ -2.71
SKI6P46948 snR81snR81 201 nt-1.89□□□□□ -2.71
SKI6P46948 YHR180C-BYHR180C-B 105 nt-1.89□□□□□ -2.71
SKI6P46948 YMR315W-AYMR315W-A 108 nt-1.89□□□□□ -2.71
SKI6P46948 YOR231C-AYOR231C-A 201 nt-1.89□□□□□ -2.71
SKI6P46948 YNL198CYNL198C 303 nt-1.95□□□□□ -2.72
SKI6P46948 YDR406W-AYDR406W-A 246 nt-1.99□□□□□ -2.73
SKI6P46948 SOM1YEL059C-A 225 nt-2.02□□□□□ -2.73
SKI6P46948 YJL150WYJL150W 303 nt-2.02□□□□□ -2.73
SKI6P46948 YDR524W-CYDR524W-C 90 nt-2.08□□□□□ -2.74
SKI6P46948 YKL106C-AYKL106C-A 120 nt-2.09□□□□□ -2.74
SKI6P46948 YBL053WYBL053W 375 nt-2.09□□□□□ -2.74
SKI6P46948 YOR316C-AYOR316C-A 210 nt-2.1□□□□□ -2.75
SKI6P46948 YCR095W-AYCR095W-A 159 nt-2.16□□□□□ -2.76
SKI6P46948 RPL41AYDL184C 78 nt-2.24□□□□□ -2.77
SKI6P46948 YBR109W-AYBR109W-A 225 nt-2.25□□□□□ -2.77
SKI6P46948 YBR296C-AYBR296C-A 120 nt-2.25□□□□□ -2.77
SKI6P46948 YOR309CYOR309C 381 nt-2.26□□□□□ -2.77
SKI6P46948 YBR126W-BYBR126W-B 144 nt-2.28□□□□□ -2.77
SKI6P46948 YGR151CYGR151C 336 nt-2.35□□□□□ -2.79
SKI6P46948 YOL083C-AYOL083C-A 141 nt-2.35□□□□□ -2.79
SKI6P46948 snR38snR38 95 nt-2.4□□□□□ -2.79
SKI6P46948 YBL071C-BYBL071C-B 99 nt-2.42□□□□□ -2.8
SKI6P46948 YMR046W-AYMR046W-A 129 nt-2.44□□□□□ -2.8
SKI6P46948 YOL164W-AYOL164W-A 183 nt-2.45□□□□□ -2.8
SKI6P46948 snR47snR47 99 nt-2.53□□□□□ -2.81
SKI6P46948 SPG3YDR504C 384 nt-2.54□□□□□ -2.82
SKI6P46948 YCL001W-BYCL001W-B 255 nt-2.58□□□□□ -2.82
SKI6P46948 YAL037C-AYAL037C-A 93 nt-2.6□□□□□ -2.83
SKI6P46948 snR6snR6 112 nt-2.62□□□□□ -2.83
SKI6P46948 YBL100W-CYBL100W-C 120 nt-2.62□□□□□ -2.83
SKI6P46948 YLR466C-BYLR466C-B 117 nt-2.74□□□□□ -2.85
SKI6P46948 YOR335W-AYOR335W-A 81 nt-2.74□□□□□ -2.85
SKI6P46948 RPL41BYDL133C-A 78 nt-2.76□□□□□ -2.85
SKI6P46948 tM(CAU)Q1tM(CAU)Q1 76 nt-2.77□□□□□ -2.85
SKI6P46948 snR73snR73 106 nt-2.81□□□□□ -2.86
SKI6P46948 tS(GCU)Q1tS(GCU)Q1 86 nt-2.83□□□□□ -2.86
SKI6P46948 YKL225WYKL225W 348 nt-2.83□□□□□ -2.86
SKI6P46948 YNL338WYNL338W 159 nt-2.83□□□□□ -2.86
SKI6P46948 YNL337WYNL337W 255 nt-2.86□□□□□ -2.87
SKI6P46948 YDR543CYDR543C 300 nt-2.89□□□□□ -2.87
SKI6P46948 YDL114W-AYDL114W-A 114 nt-2.9□□□□□ -2.87
SKI6P46948 Q0142Q0142 177 nt-2.94□□□□□ -2.88
SKI6P46948 tV(UAC)QtV(UAC)Q 76 nt-2.95□□□□□ -2.88
SKI6P46948 snR85snR85 171 nt-2.99□□□□□ -2.89
SKI6P46948 YGL041C-BYGL041C-B 183 nt-3.13□□□□□ -2.91
SKI6P46948 YDR034C-AYDR034C-A 177 nt-3.15□□□□□ -2.91
SKI6P46948 YDR524C-AYDR524C-A 120 nt-3.23□□□□□ -2.93
SKI6P46948 YDL159W-AYDL159W-A 132 nt-3.24□□□□□ -2.93
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms