Protein–RNA interactions for Protein: P43603

LSB3, LAS seventeen-binding protein 3, yeastyeast

Known RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSB3P43603 DNF3YMR162C 4971 nt1.65□□□□□ -2.15
LSB3P43603 YOR093CYOR093C 4947 nt1.63□□□□□ -2.15
LSB3P43603 YER090C-AYER090C-A 90 nt1.63□□□□□ -2.15
LSB3P43603 tT(UGU)HtT(UGU)H 72 nt1.63□□□□□ -2.15
LSB3P43603 FYV8YGR196C 2454 nt1.62□□□□□ -2.15
LSB3P43603 TMA7YLR262C-A 195 nt1.62□□□□□ -2.15
LSB3P43603 YMR247W-AYMR247W-A 144 nt1.62□□□□□ -2.15
LSB3P43603 MEC1YBR136W 7107 nt1.62□□□□□ -2.15
LSB3P43603 YKL106C-AYKL106C-A 120 nt1.61□□□□□ -2.15
LSB3P43603 YMR160WYMR160W 2451 nt1.61□□□□□ -2.15
LSB3P43603 MYO1YHR023W 5787 nt1.6□□□□□ -2.15
LSB3P43603 SSK2YNR031C 4740 nt1.59□□□□□ -2.15
LSB3P43603 YGR130CYGR130C 2451 nt1.59□□□□□ -2.15
LSB3P43603 LAA1YJL207C 6045 nt1.59□□□□□ -2.15
LSB3P43603 CDC25YLR310C 4770 nt1.59□□□□□ -2.16
LSB3P43603 APL3YBL037W 3078 nt1.56□□□□□ -2.16
LSB3P43603 snR67snR67 82 nt1.55□□□□□ -2.16
LSB3P43603 YLL006W-AYLL006W-A 177 nt1.54□□□□□ -2.16
LSB3P43603 PMD1YER132C 5262 nt1.54□□□□□ -2.16
LSB3P43603 TRM732YMR259C 4263 nt1.53□□□□□ -2.16
LSB3P43603 VPS15YBR097W 4365 nt1.53□□□□□ -2.16
LSB3P43603 FIG2YCR089W 4830 nt1.51□□□□□ -2.17
LSB3P43603 IML1YJR138W 4755 nt1.5□□□□□ -2.17
LSB3P43603 SWI4YER111C 3282 nt1.49□□□□□ -2.17
LSB3P43603 CLU1YMR012W 3834 nt1.49□□□□□ -2.17
LSB3P43603 BST1YFL025C 3090 nt1.48□□□□□ -2.17
LSB3P43603 NUP188YML103C 4968 nt1.45□□□□□ -2.18
LSB3P43603 NUP145YGL092W 3954 nt1.43□□□□□ -2.18
LSB3P43603 PAU24YBR301W 363 nt1.43□□□□□ -2.18
LSB3P43603 IRA1YBR140C 9279 nt1.39□□□□□ -2.19
LSB3P43603 YNL284C-BYNL284C-B 5268 nt1.39□□□□□ -2.19
LSB3P43603 snR77snR77 88 nt1.38□□□□□ -2.19
LSB3P43603 CDC39YCR093W 6327 nt1.37□□□□□ -2.19
LSB3P43603 SOV1YMR066W 2697 nt1.37□□□□□ -2.19
LSB3P43603 tH(GUG)E1tH(GUG)E1 72 nt1.36□□□□□ -2.19
LSB3P43603 tH(GUG)E2tH(GUG)E2 72 nt1.36□□□□□ -2.19
LSB3P43603 tH(GUG)G1tH(GUG)G1 72 nt1.36□□□□□ -2.19
LSB3P43603 tH(GUG)G2tH(GUG)G2 72 nt1.36□□□□□ -2.19
LSB3P43603 tH(GUG)HtH(GUG)H 72 nt1.36□□□□□ -2.19
LSB3P43603 tH(GUG)KtH(GUG)K 72 nt1.36□□□□□ -2.19
LSB3P43603 tH(GUG)MtH(GUG)M 72 nt1.36□□□□□ -2.19
LSB3P43603 YPR117WYPR117W 7470 nt1.34□□□□□ -2.19
LSB3P43603 VAM6YDL077C 3150 nt1.33□□□□□ -2.2
LSB3P43603 tQ(UUG)E2tQ(UUG)E2 72 nt1.3□□□□□ -2.2
LSB3P43603 MLP2YIL149C 5040 nt1.3□□□□□ -2.2
LSB3P43603 SPT7YBR081C 3999 nt1.29□□□□□ -2.2
LSB3P43603 tV(UAC)BtV(UAC)B 74 nt1.28□□□□□ -2.2
LSB3P43603 tV(UAC)DtV(UAC)D 74 nt1.28□□□□□ -2.2
LSB3P43603 YOR316C-AYOR316C-A 210 nt1.27□□□□□ -2.21
LSB3P43603 HKR1YDR420W 5409 nt1.24□□□□□ -2.21
LSB3P43603 YOR192C-BYOR192C-B 5313 nt1.23□□□□□ -2.21
LSB3P43603 BUD3YCL014W 4911 nt1.21□□□□□ -2.22
LSB3P43603 UTP20YBL004W 7482 nt1.2□□□□□ -2.22
LSB3P43603 SBH2YER019C-A 267 nt1.2□□□□□ -2.22
LSB3P43603 tF(GAA)BtF(GAA)B 73 nt1.16□□□□□ -2.22
LSB3P43603 tF(GAA)FtF(GAA)F 73 nt1.16□□□□□ -2.22
LSB3P43603 tF(GAA)GtF(GAA)G 73 nt1.16□□□□□ -2.22
LSB3P43603 tF(GAA)H1tF(GAA)H1 73 nt1.16□□□□□ -2.22
LSB3P43603 tF(GAA)H2tF(GAA)H2 73 nt1.16□□□□□ -2.22
LSB3P43603 tF(GAA)MtF(GAA)M 73 nt1.16□□□□□ -2.22
LSB3P43603 tF(GAA)P1tF(GAA)P1 73 nt1.16□□□□□ -2.22
LSB3P43603 tF(GAA)P2tF(GAA)P2 73 nt1.16□□□□□ -2.22
LSB3P43603 RKR1YMR247C 4689 nt1.1□□□□□ -2.23
LSB3P43603 YBL100W-BYBL100W-B 5313 nt1.06□□□□□ -2.24
LSB3P43603 tC(GCA)QtC(GCA)Q 76 nt1.05□□□□□ -2.24
LSB3P43603 YML100W-AYML100W-A 174 nt1.01□□□□□ -2.25
LSB3P43603 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
LSB3P43603 YOL014WYOL014W 375 nt0.98□□□□□ -2.25
LSB3P43603 LTE1YAL024C 4308 nt0.97□□□□□ -2.25
LSB3P43603 THO2YNL139C 4794 nt0.97□□□□□ -2.25
LSB3P43603 SCC2YDR180W 4482 nt0.97□□□□□ -2.25
LSB3P43603 BEM2YER155C 6504 nt0.97□□□□□ -2.25
LSB3P43603 ESP1YGR098C 4893 nt0.92□□□□□ -2.26
LSB3P43603 YJR029WYJR029W 5268 nt0.92□□□□□ -2.26
LSB3P43603 YPR137C-BYPR137C-B 5268 nt0.92□□□□□ -2.26
LSB3P43603 RPL41BYDL133C-A 78 nt0.91□□□□□ -2.26
LSB3P43603 EMT1tM(CAU)D 73 nt0.88□□□□□ -2.27
LSB3P43603 EMT5tM(CAU)J1 73 nt0.88□□□□□ -2.27
LSB3P43603 EMT3tM(CAU)J2 73 nt0.88□□□□□ -2.27
LSB3P43603 EMT4tM(CAU)M 73 nt0.88□□□□□ -2.27
LSB3P43603 EMT2tM(CAU)O2 73 nt0.88□□□□□ -2.27
LSB3P43603 YKL145W-AYKL145W-A 93 nt0.88□□□□□ -2.27
LSB3P43603 YOR335W-AYOR335W-A 81 nt0.88□□□□□ -2.27
LSB3P43603 YJL113WYJL113W 4647 nt0.82□□□□□ -2.28
LSB3P43603 snR6snR6 112 nt0.8□□□□□ -2.28
LSB3P43603 tT(AGU)BtT(AGU)B 73 nt0.78□□□□□ -2.28
LSB3P43603 tT(AGU)CtT(AGU)C 73 nt0.78□□□□□ -2.28
LSB3P43603 tT(AGU)DtT(AGU)D 73 nt0.78□□□□□ -2.28
LSB3P43603 tT(AGU)HtT(AGU)H 73 nt0.78□□□□□ -2.28
LSB3P43603 tT(AGU)I1tT(AGU)I1 73 nt0.78□□□□□ -2.28
LSB3P43603 tT(AGU)I2tT(AGU)I2 73 nt0.78□□□□□ -2.28
LSB3P43603 tT(AGU)JtT(AGU)J 73 nt0.78□□□□□ -2.28
LSB3P43603 tT(AGU)N1tT(AGU)N1 73 nt0.78□□□□□ -2.28
LSB3P43603 tT(AGU)N2tT(AGU)N2 73 nt0.78□□□□□ -2.28
LSB3P43603 tT(AGU)O1tT(AGU)O1 73 nt0.78□□□□□ -2.28
LSB3P43603 tT(AGU)O2tT(AGU)O2 73 nt0.78□□□□□ -2.28
LSB3P43603 FMP27YLR454W 7887 nt0.76□□□□□ -2.29
LSB3P43603 snR58snR58 96 nt0.75□□□□□ -2.29
LSB3P43603 MLP1YKR095W 5628 nt0.74□□□□□ -2.29
LSB3P43603 YOR186C-AYOR186C-A 210 nt0.74□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms