Protein–RNA interactions for Protein: P43558

OTU1, Ubiquitin thioesterase OTU1, yeastyeast

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
OTU1P43558 YDR157WYDR157W 402 nt-1.24□□□□□ -2.61
OTU1P43558 tY(GUA)QtY(GUA)Q 84 nt-1.24□□□□□ -2.61
OTU1P43558 YNL205CYNL205C 423 nt-1.24□□□□□ -2.61
OTU1P43558 YOR381W-AYOR381W-A 168 nt-1.24□□□□□ -2.61
OTU1P43558 CDC65tQ(CUG)M 72 nt-1.25□□□□□ -2.61
OTU1P43558 snR39BsnR39B 96 nt-1.26□□□□□ -2.61
OTU1P43558 snR77snR77 88 nt-1.27□□□□□ -2.61
OTU1P43558 YGR146C-AYGR146C-A 162 nt-1.28□□□□□ -2.61
OTU1P43558 YBR178WYBR178W 375 nt-1.28□□□□□ -2.61
OTU1P43558 tD(GUC)QtD(GUC)Q 75 nt-1.29□□□□□ -2.62
OTU1P43558 YLR286W-AYLR286W-A 135 nt-1.29□□□□□ -2.62
OTU1P43558 YML054C-AYML054C-A 159 nt-1.29□□□□□ -2.62
OTU1P43558 YOR329W-AYOR329W-A 210 nt-1.31□□□□□ -2.62
OTU1P43558 YPR197CYPR197C 564 nt-1.31□□□□□ -2.62
OTU1P43558 YBR131C-AYBR131C-A 90 nt-1.32□□□□□ -2.62
OTU1P43558 YLR222C-AYLR222C-A 231 nt-1.33□□□□□ -2.62
OTU1P43558 YBR182C-AYBR182C-A 195 nt-1.33□□□□□ -2.62
OTU1P43558 YGR240C-AYGR240C-A 201 nt-1.34□□□□□ -2.62
OTU1P43558 YDL159C-BYDL159C-B 177 nt-1.35□□□□□ -2.63
OTU1P43558 snR81snR81 201 nt-1.37□□□□□ -2.63
OTU1P43558 YMR315W-AYMR315W-A 108 nt-1.37□□□□□ -2.63
OTU1P43558 RPL39YJL189W 156 nt-1.39□□□□□ -2.63
OTU1P43558 tF(GAA)QtF(GAA)Q 75 nt-1.42□□□□□ -2.64
OTU1P43558 YDL240C-AYDL240C-A 138 nt-1.47□□□□□ -2.64
OTU1P43558 YOR376W-AYOR376W-A 156 nt-1.49□□□□□ -2.65
OTU1P43558 YDR413CYDR413C 576 nt-1.5□□□□□ -2.65
OTU1P43558 YER181CYER181C 324 nt-1.51□□□□□ -2.65
OTU1P43558 YLR299C-AYLR299C-A 93 nt-1.51□□□□□ -2.65
OTU1P43558 YDR118W-AYDR118W-A 117 nt-1.52□□□□□ -2.65
OTU1P43558 YNL097C-BYNL097C-B 123 nt-1.52□□□□□ -2.65
OTU1P43558 YKL118WYKL118W 312 nt-1.53□□□□□ -2.65
OTU1P43558 VAR1Q0140 1197 nt-1.54□□□□□ -2.66
OTU1P43558 YNL277W-AYNL277W-A 189 nt-1.55□□□□□ -2.66
OTU1P43558 YBR196C-AYBR196C-A 150 nt-1.55□□□□□ -2.66
OTU1P43558 tL(UAA)QtL(UAA)Q 85 nt-1.57□□□□□ -2.66
OTU1P43558 YOR309CYOR309C 381 nt-1.58□□□□□ -2.66
OTU1P43558 YGL188C-AYGL188C-A 141 nt-1.59□□□□□ -2.66
OTU1P43558 snR55snR55 98 nt-1.6□□□□□ -2.67
OTU1P43558 YOR102WYOR102W 351 nt-1.61□□□□□ -2.67
OTU1P43558 snR48snR48 113 nt-1.61□□□□□ -2.67
OTU1P43558 YNR077CYNR077C 255 nt-1.63□□□□□ -2.67
OTU1P43558 YPR012WYPR012W 255 nt-1.63□□□□□ -2.67
OTU1P43558 GIM4YEL003W 336 nt-1.64□□□□□ -2.67
OTU1P43558 YOR302WYOR302W 78 nt-1.65□□□□□ -2.67
OTU1P43558 YHR180C-BYHR180C-B 105 nt-1.7□□□□□ -2.68
OTU1P43558 snR52snR52 92 nt-1.7□□□□□ -2.68
OTU1P43558 YOR316C-AYOR316C-A 210 nt-1.72□□□□□ -2.68
OTU1P43558 YKL106C-AYKL106C-A 120 nt-1.74□□□□□ -2.69
OTU1P43558 YOL155W-AYOL155W-A 135 nt-1.74□□□□□ -2.69
OTU1P43558 YBR126W-BYBR126W-B 144 nt-1.74□□□□□ -2.69
OTU1P43558 YHL015W-AYHL015W-A 84 nt-1.76□□□□□ -2.69
OTU1P43558 YLR342W-AYLR342W-A 174 nt-1.77□□□□□ -2.69
OTU1P43558 YJL150WYJL150W 303 nt-1.79□□□□□ -2.7
OTU1P43558 YPL152W-AYPL152W-A 99 nt-1.85□□□□□ -2.71
OTU1P43558 YBR109W-AYBR109W-A 225 nt-1.87□□□□□ -2.71
OTU1P43558 YDR524W-CYDR524W-C 90 nt-1.9□□□□□ -2.71
OTU1P43558 YNL198CYNL198C 303 nt-1.92□□□□□ -2.72
OTU1P43558 snR6snR6 112 nt-1.93□□□□□ -2.72
OTU1P43558 YBL053WYBL053W 375 nt-1.94□□□□□ -2.72
OTU1P43558 YOL083C-AYOL083C-A 141 nt-1.95□□□□□ -2.72
OTU1P43558 RPL41AYDL184C 78 nt-1.96□□□□□ -2.72
OTU1P43558 YBR296C-AYBR296C-A 120 nt-1.96□□□□□ -2.72
OTU1P43558 snR65snR65 100 nt-1.97□□□□□ -2.72
OTU1P43558 snR80snR80 171 nt-1.97□□□□□ -2.72
OTU1P43558 SOM1YEL059C-A 225 nt-1.97□□□□□ -2.72
OTU1P43558 snR38snR38 95 nt-1.97□□□□□ -2.72
OTU1P43558 snR56snR56 88 nt-2□□□□□ -2.73
OTU1P43558 Q0144Q0144 330 nt-2□□□□□ -2.73
OTU1P43558 YOR335W-AYOR335W-A 81 nt-2□□□□□ -2.73
OTU1P43558 snR73snR73 106 nt-2.04□□□□□ -2.74
OTU1P43558 YBL071C-BYBL071C-B 99 nt-2.1□□□□□ -2.75
OTU1P43558 YCR095W-AYCR095W-A 159 nt-2.13□□□□□ -2.75
OTU1P43558 YGR151CYGR151C 336 nt-2.14□□□□□ -2.75
OTU1P43558 RPL41BYDL133C-A 78 nt-2.16□□□□□ -2.76
OTU1P43558 YDR406W-AYDR406W-A 246 nt-2.16□□□□□ -2.76
OTU1P43558 YOL164W-AYOL164W-A 183 nt-2.16□□□□□ -2.76
OTU1P43558 YOR231C-AYOR231C-A 201 nt-2.19□□□□□ -2.76
OTU1P43558 snR47snR47 99 nt-2.19□□□□□ -2.76
OTU1P43558 YHR175W-AYHR175W-A 150 nt-2.23□□□□□ -2.77
OTU1P43558 YDL114W-AYDL114W-A 114 nt-2.34□□□□□ -2.78
OTU1P43558 tV(UAC)QtV(UAC)Q 76 nt-2.34□□□□□ -2.78
OTU1P43558 YAL037C-AYAL037C-A 93 nt-2.34□□□□□ -2.78
OTU1P43558 YDR524C-AYDR524C-A 120 nt-2.36□□□□□ -2.79
OTU1P43558 tS(GCU)Q1tS(GCU)Q1 86 nt-2.37□□□□□ -2.79
OTU1P43558 tR(ACG)Q2tR(ACG)Q2 74 nt-2.39□□□□□ -2.79
OTU1P43558 YKL225WYKL225W 348 nt-2.39□□□□□ -2.79
OTU1P43558 YBL100W-CYBL100W-C 120 nt-2.39□□□□□ -2.79
OTU1P43558 snR85snR85 171 nt-2.4□□□□□ -2.79
OTU1P43558 YCL001W-BYCL001W-B 255 nt-2.4□□□□□ -2.79
OTU1P43558 SPG3YDR504C 384 nt-2.41□□□□□ -2.8
OTU1P43558 YDR543CYDR543C 300 nt-2.41□□□□□ -2.8
OTU1P43558 snR87snR87 109 nt-2.59□□□□□ -2.82
OTU1P43558 YDL159W-AYDL159W-A 132 nt-2.6□□□□□ -2.83
OTU1P43558 YNL337WYNL337W 255 nt-2.61□□□□□ -2.83
OTU1P43558 YMR046W-AYMR046W-A 129 nt-2.63□□□□□ -2.83
OTU1P43558 YGR122C-AYGR122C-A 129 nt-2.64□□□□□ -2.83
OTU1P43558 YKL096C-BYKL096C-B 150 nt-2.7□□□□□ -2.84
OTU1P43558 YDR034C-AYDR034C-A 177 nt-2.71□□□□□ -2.84
OTU1P43558 YLR466C-BYLR466C-B 117 nt-2.74□□□□□ -2.85
OTU1P43558 YNL338WYNL338W 159 nt-2.75□□□□□ -2.85
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms