Protein–RNA interactions for Protein: P43548

AGP3, General amino acid permease AGP3, yeastyeast

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AGP3P43548 YOR170WYOR170W 306 nt-0.59□□□□□ -2.5
AGP3P43548 YPL152W-AYPL152W-A 99 nt-0.59□□□□□ -2.5
AGP3P43548 tM(CAU)Q2tM(CAU)Q2 78 nt-0.6□□□□□ -2.51
AGP3P43548 YML100W-AYML100W-A 174 nt-0.6□□□□□ -2.51
AGP3P43548 YDL007C-AYDL007C-A 258 nt-0.61□□□□□ -2.51
AGP3P43548 YNL097C-BYNL097C-B 123 nt-0.62□□□□□ -2.51
AGP3P43548 tT(UGU)G1tT(UGU)G1 72 nt-0.64□□□□□ -2.51
AGP3P43548 tT(UGU)G2tT(UGU)G2 72 nt-0.64□□□□□ -2.51
AGP3P43548 tT(UGU)PtT(UGU)P 72 nt-0.64□□□□□ -2.51
AGP3P43548 tQ(UUG)QtQ(UUG)Q 76 nt-0.65□□□□□ -2.51
AGP3P43548 snR33snR33 183 nt-0.66□□□□□ -2.52
AGP3P43548 snR69snR69 101 nt-0.67□□□□□ -2.52
AGP3P43548 tA(UGC)QtA(UGC)Q 76 nt-0.68□□□□□ -2.52
AGP3P43548 YDR524W-CYDR524W-C 90 nt-0.68□□□□□ -2.52
AGP3P43548 YGR146C-AYGR146C-A 162 nt-0.69□□□□□ -2.52
AGP3P43548 YOR302WYOR302W 78 nt-0.69□□□□□ -2.52
AGP3P43548 snR39BsnR39B 96 nt-0.69□□□□□ -2.52
AGP3P43548 PAU9YBL108C-A 129 nt-0.71□□□□□ -2.52
AGP3P43548 YGL188C-AYGL188C-A 141 nt-0.73□□□□□ -2.53
AGP3P43548 YOR329W-AYOR329W-A 210 nt-0.75□□□□□ -2.53
AGP3P43548 YOR231C-AYOR231C-A 201 nt-0.76□□□□□ -2.53
AGP3P43548 PMP2YEL017C-A 132 nt-0.77□□□□□ -2.53
AGP3P43548 snR161snR161 161 nt-0.77□□□□□ -2.53
AGP3P43548 RDS3YPR094W 324 nt-0.77□□□□□ -2.53
AGP3P43548 YER090C-AYER090C-A 90 nt-0.79□□□□□ -2.54
AGP3P43548 YHL009W-BYHL009W-B 5409 nt-0.84□□□□□ -2.54
AGP3P43548 YNL266WYNL266W 420 nt-0.85□□□□□ -2.55
AGP3P43548 YNR077CYNR077C 255 nt-0.85□□□□□ -2.55
AGP3P43548 snR48snR48 113 nt-0.86□□□□□ -2.55
AGP3P43548 snR50snR50 90 nt-0.86□□□□□ -2.55
AGP3P43548 snR52snR52 92 nt-0.87□□□□□ -2.55
AGP3P43548 YLR342W-AYLR342W-A 174 nt-0.88□□□□□ -2.55
AGP3P43548 snR80snR80 171 nt-0.9□□□□□ -2.55
AGP3P43548 tD(GUC)QtD(GUC)Q 75 nt-0.92□□□□□ -2.56
AGP3P43548 JLP2YMR132C 627 nt-0.93□□□□□ -2.56
AGP3P43548 YNL205CYNL205C 423 nt-0.93□□□□□ -2.56
AGP3P43548 YBR223W-AYBR223W-A 120 nt-0.93□□□□□ -2.56
AGP3P43548 tL(UAA)QtL(UAA)Q 85 nt-0.98□□□□□ -2.57
AGP3P43548 YLR286W-AYLR286W-A 135 nt-0.98□□□□□ -2.57
AGP3P43548 tP(UGG)QtP(UGG)Q 72 nt-0.99□□□□□ -2.57
AGP3P43548 YOR102WYOR102W 351 nt-1□□□□□ -2.57
AGP3P43548 YBR178WYBR178W 375 nt-1□□□□□ -2.57
AGP3P43548 snR67snR67 82 nt-1.01□□□□□ -2.57
AGP3P43548 YHL015W-AYHL015W-A 84 nt-1.01□□□□□ -2.57
AGP3P43548 YDL159C-BYDL159C-B 177 nt-1.04□□□□□ -2.58
AGP3P43548 YDR406W-AYDR406W-A 246 nt-1.1□□□□□ -2.59
AGP3P43548 SKI7YOR076C 2244 nt-1.16□□□□□ -2.59
AGP3P43548 YBR196C-AYBR196C-A 150 nt-1.19□□□□□ -2.6
AGP3P43548 YLR299C-AYLR299C-A 93 nt-1.21□□□□□ -2.6
AGP3P43548 Q0142Q0142 177 nt-1.22□□□□□ -2.6
AGP3P43548 YNL198CYNL198C 303 nt-1.24□□□□□ -2.61
AGP3P43548 tY(GUA)QtY(GUA)Q 84 nt-1.27□□□□□ -2.61
AGP3P43548 YJL150WYJL150W 303 nt-1.29□□□□□ -2.62
AGP3P43548 YML054C-AYML054C-A 159 nt-1.31□□□□□ -2.62
AGP3P43548 CDC65tQ(CUG)M 72 nt-1.32□□□□□ -2.62
AGP3P43548 snR77snR77 88 nt-1.33□□□□□ -2.62
AGP3P43548 YMR046W-AYMR046W-A 129 nt-1.34□□□□□ -2.62
AGP3P43548 SOM1YEL059C-A 225 nt-1.38□□□□□ -2.63
AGP3P43548 YBL053WYBL053W 375 nt-1.38□□□□□ -2.63
AGP3P43548 YGR240C-AYGR240C-A 201 nt-1.4□□□□□ -2.63
AGP3P43548 snR81snR81 201 nt-1.42□□□□□ -2.64
AGP3P43548 YMR315W-AYMR315W-A 108 nt-1.44□□□□□ -2.64
AGP3P43548 YCR095W-AYCR095W-A 159 nt-1.46□□□□□ -2.64
AGP3P43548 SPG3YDR504C 384 nt-1.49□□□□□ -2.65
AGP3P43548 YHR180C-BYHR180C-B 105 nt-1.49□□□□□ -2.65
AGP3P43548 YOR376W-AYOR376W-A 156 nt-1.54□□□□□ -2.66
AGP3P43548 tM(CAU)Q1tM(CAU)Q1 76 nt-1.57□□□□□ -2.66
AGP3P43548 YBR126W-BYBR126W-B 144 nt-1.65□□□□□ -2.67
AGP3P43548 YOR309CYOR309C 381 nt-1.67□□□□□ -2.68
AGP3P43548 YGR151CYGR151C 336 nt-1.74□□□□□ -2.69
AGP3P43548 YLR466C-BYLR466C-B 117 nt-1.74□□□□□ -2.69
AGP3P43548 YOR316C-AYOR316C-A 210 nt-1.75□□□□□ -2.69
AGP3P43548 YKL106C-AYKL106C-A 120 nt-1.76□□□□□ -2.69
AGP3P43548 YBR296C-AYBR296C-A 120 nt-1.79□□□□□ -2.7
AGP3P43548 RPL41AYDL184C 78 nt-1.8□□□□□ -2.7
AGP3P43548 YOL083C-AYOL083C-A 141 nt-1.8□□□□□ -2.7
AGP3P43548 YCL001W-BYCL001W-B 255 nt-1.81□□□□□ -2.7
AGP3P43548 YBR109W-AYBR109W-A 225 nt-1.82□□□□□ -2.7
AGP3P43548 YBL071C-BYBL071C-B 99 nt-1.85□□□□□ -2.71
AGP3P43548 YNL338WYNL338W 159 nt-1.88□□□□□ -2.71
AGP3P43548 YOL164W-AYOL164W-A 183 nt-1.91□□□□□ -2.72
AGP3P43548 YAL037C-AYAL037C-A 93 nt-1.93□□□□□ -2.72
AGP3P43548 snR38snR38 95 nt-1.96□□□□□ -2.72
AGP3P43548 snR6snR6 112 nt-2.01□□□□□ -2.73
AGP3P43548 YBL100W-CYBL100W-C 120 nt-2.03□□□□□ -2.73
AGP3P43548 snR47snR47 99 nt-2.04□□□□□ -2.74
AGP3P43548 YDR543CYDR543C 300 nt-2.09□□□□□ -2.74
AGP3P43548 YNL337WYNL337W 255 nt-2.09□□□□□ -2.74
AGP3P43548 YOR335W-AYOR335W-A 81 nt-2.11□□□□□ -2.75
AGP3P43548 YOL166W-AYOL166W-A 156 nt-2.13□□□□□ -2.75
AGP3P43548 snR73snR73 106 nt-2.14□□□□□ -2.75
AGP3P43548 Q0032Q0032 291 nt-2.18□□□□□ -2.76
AGP3P43548 RPL41BYDL133C-A 78 nt-2.2□□□□□ -2.76
AGP3P43548 YGL007C-AYGL007C-A 87 nt-2.3□□□□□ -2.78
AGP3P43548 YKL225WYKL225W 348 nt-2.32□□□□□ -2.78
AGP3P43548 tS(GCU)Q1tS(GCU)Q1 86 nt-2.33□□□□□ -2.78
AGP3P43548 YDL114W-AYDL114W-A 114 nt-2.39□□□□□ -2.79
AGP3P43548 tV(UAC)QtV(UAC)Q 76 nt-2.39□□□□□ -2.79
AGP3P43548 YGL041C-BYGL041C-B 183 nt-2.4□□□□□ -2.79
AGP3P43548 snR61snR61 90 nt-2.45□□□□□ -2.8
Retrieved 100 of 7,029 protein–RNA pairs in 26.5 ms