Protein–RNA interactions for Protein: P41806

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, yeastyeast

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA21P41806 YBR178WYBR178W 375 nt-2.59□□□□□ -2.82
VMA21P41806 YKL063CYKL063C 504 nt-2.6□□□□□ -2.83
VMA21P41806 YEL014CYEL014C 306 nt-2.62□□□□□ -2.83
VMA21P41806 ATP19YOL077W-A 207 nt-2.63□□□□□ -2.83
VMA21P41806 YOR329W-AYOR329W-A 210 nt-2.69□□□□□ -2.84
VMA21P41806 YJR157WYJR157W 363 nt-2.72□□□□□ -2.84
VMA21P41806 YBR126W-BYBR126W-B 144 nt-2.72□□□□□ -2.84
VMA21P41806 YBR182C-AYBR182C-A 195 nt-2.72□□□□□ -2.84
VMA21P41806 YGR035CYGR035C 351 nt-2.74□□□□□ -2.85
VMA21P41806 YAL016C-BYAL016C-B 186 nt-2.75□□□□□ -2.85
VMA21P41806 YOR376W-AYOR376W-A 156 nt-2.76□□□□□ -2.85
VMA21P41806 YAL063C-AYAL063C-A 291 nt-2.8□□□□□ -2.86
VMA21P41806 YOR309CYOR309C 381 nt-2.81□□□□□ -2.86
VMA21P41806 snR78snR78 87 nt-2.83□□□□□ -2.86
VMA21P41806 YDR183C-AYDR183C-A 258 nt-2.84□□□□□ -2.86
VMA21P41806 tR(UCU)Q1tR(UCU)Q1 73 nt-2.85□□□□□ -2.87
VMA21P41806 YLR299C-AYLR299C-A 93 nt-2.87□□□□□ -2.87
VMA21P41806 YBR131C-AYBR131C-A 90 nt-2.87□□□□□ -2.87
VMA21P41806 YBR196C-AYBR196C-A 150 nt-2.87□□□□□ -2.87
VMA21P41806 YAL068W-AYAL068W-A 255 nt-2.88□□□□□ -2.87
VMA21P41806 YOR293C-AYOR293C-A 150 nt-2.89□□□□□ -2.87
VMA21P41806 YLR222C-AYLR222C-A 231 nt-2.9□□□□□ -2.87
VMA21P41806 tF(GAA)QtF(GAA)Q 75 nt-2.93□□□□□ -2.88
VMA21P41806 YER181CYER181C 324 nt-2.98□□□□□ -2.89
VMA21P41806 YLR342W-AYLR342W-A 174 nt-3.01□□□□□ -2.89
VMA21P41806 YOR316C-AYOR316C-A 210 nt-3.02□□□□□ -2.89
VMA21P41806 YPL038W-AYPL038W-A 192 nt-3.02□□□□□ -2.89
VMA21P41806 YOR102WYOR102W 351 nt-3.08□□□□□ -2.9
VMA21P41806 snR48snR48 113 nt-3.08□□□□□ -2.9
VMA21P41806 YHR180C-BYHR180C-B 105 nt-3.09□□□□□ -2.9
VMA21P41806 YPR197CYPR197C 564 nt-3.09□□□□□ -2.9
VMA21P41806 YDR413CYDR413C 576 nt-3.1□□□□□ -2.91
VMA21P41806 YNL097C-BYNL097C-B 123 nt-3.1□□□□□ -2.91
VMA21P41806 YPR012WYPR012W 255 nt-3.14□□□□□ -2.91
VMA21P41806 YGL188C-AYGL188C-A 141 nt-3.15□□□□□ -2.91
VMA21P41806 tL(UAA)QtL(UAA)Q 85 nt-3.17□□□□□ -2.92
VMA21P41806 YKL118WYKL118W 312 nt-3.18□□□□□ -2.92
VMA21P41806 YKL106C-AYKL106C-A 120 nt-3.19□□□□□ -2.92
VMA21P41806 YDR524W-CYDR524W-C 90 nt-3.22□□□□□ -2.92
VMA21P41806 snR55snR55 98 nt-3.24□□□□□ -2.93
VMA21P41806 YEL050W-AYEL050W-A 192 nt-3.26□□□□□ -2.93
VMA21P41806 YNL277W-AYNL277W-A 189 nt-3.28□□□□□ -2.93
VMA21P41806 YOL083C-AYOL083C-A 141 nt-3.28□□□□□ -2.93
VMA21P41806 RPL39YJL189W 156 nt-3.31□□□□□ -2.94
VMA21P41806 YJL150WYJL150W 303 nt-3.38□□□□□ -2.95
VMA21P41806 snR6snR6 112 nt-3.41□□□□□ -2.96
VMA21P41806 YBR109W-AYBR109W-A 225 nt-3.43□□□□□ -2.96
VMA21P41806 YOR302WYOR302W 78 nt-3.45□□□□□ -2.96
VMA21P41806 YHL015W-AYHL015W-A 84 nt-3.51□□□□□ -2.97
VMA21P41806 GIM4YEL003W 336 nt-3.52□□□□□ -2.97
VMA21P41806 snR52snR52 92 nt-3.53□□□□□ -2.97
VMA21P41806 YOL155W-AYOL155W-A 135 nt-3.54□□□□□ -2.98
VMA21P41806 YDL240C-AYDL240C-A 138 nt-3.56□□□□□ -2.98
VMA21P41806 YBR296C-AYBR296C-A 120 nt-3.6□□□□□ -2.99
VMA21P41806 snR73snR73 106 nt-3.61□□□□□ -2.99
VMA21P41806 YDR157WYDR157W 402 nt-3.61□□□□□ -2.99
VMA21P41806 YNL198CYNL198C 303 nt-3.61□□□□□ -2.99
VMA21P41806 YOR335W-AYOR335W-A 81 nt-3.61□□□□□ -2.99
VMA21P41806 snR56snR56 88 nt-3.63□□□□□ -2.99
VMA21P41806 RPL41AYDL184C 78 nt-3.64□□□□□ -2.99
VMA21P41806 snR80snR80 171 nt-3.65□□□□□ -2.99
VMA21P41806 YDR543CYDR543C 300 nt-3.69□□□□□ -3
VMA21P41806 snR38snR38 95 nt-3.7□□□□□ -3
VMA21P41806 RPL41BYDL133C-A 78 nt-3.77□□□□□ -3.01
VMA21P41806 SOM1YEL059C-A 225 nt-3.8□□□□□ -3.02
VMA21P41806 YPL152W-AYPL152W-A 99 nt-3.81□□□□□ -3.02
VMA21P41806 YDR118W-AYDR118W-A 117 nt-3.82□□□□□ -3.02
VMA21P41806 YCR095W-AYCR095W-A 159 nt-3.99□□□□□ -3.05
VMA21P41806 snR65snR65 100 nt-4□□□□□ -3.05
VMA21P41806 YDR524C-AYDR524C-A 120 nt-4□□□□□ -3.05
VMA21P41806 YBL071C-BYBL071C-B 99 nt-4.02□□□□□ -3.05
VMA21P41806 YBL053WYBL053W 375 nt-4.04□□□□□ -3.06
VMA21P41806 YDR406W-AYDR406W-A 246 nt-4.06□□□□□ -3.06
VMA21P41806 YOL164W-AYOL164W-A 183 nt-4.07□□□□□ -3.06
VMA21P41806 Q0017Q0017 162 nt-4.07□□□□□ -3.06
VMA21P41806 YGR151CYGR151C 336 nt-4.1□□□□□ -3.07
VMA21P41806 snR47snR47 99 nt-4.18□□□□□ -3.08
VMA21P41806 tV(UAC)QtV(UAC)Q 76 nt-4.19□□□□□ -3.08
VMA21P41806 YDL114W-AYDL114W-A 114 nt-4.25□□□□□ -3.09
VMA21P41806 snR85snR85 171 nt-4.26□□□□□ -3.09
VMA21P41806 VAR1Q0140 1197 nt-4.26□□□□□ -3.09
VMA21P41806 YAL037C-AYAL037C-A 93 nt-4.35□□□□□ -3.11
VMA21P41806 YBL100W-CYBL100W-C 120 nt-4.4□□□□□ -3.11
VMA21P41806 YKL225WYKL225W 348 nt-4.44□□□□□ -3.12
VMA21P41806 snR87snR87 109 nt-4.49□□□□□ -3.13
VMA21P41806 SPG3YDR504C 384 nt-4.5□□□□□ -3.13
VMA21P41806 YOR231C-AYOR231C-A 201 nt-4.5□□□□□ -3.13
VMA21P41806 Q0142Q0142 177 nt-4.53□□□□□ -3.13
VMA21P41806 tS(GCU)Q1tS(GCU)Q1 86 nt-4.55□□□□□ -3.14
VMA21P41806 YOL166W-AYOL166W-A 156 nt-4.63□□□□□ -3.15
VMA21P41806 YCL001W-BYCL001W-B 255 nt-4.69□□□□□ -3.16
VMA21P41806 YHR175W-AYHR175W-A 150 nt-4.73□□□□□ -3.17
VMA21P41806 YNL337WYNL337W 255 nt-4.73□□□□□ -3.17
VMA21P41806 YKL096C-BYKL096C-B 150 nt-4.82□□□□□ -3.18
VMA21P41806 YGR122C-AYGR122C-A 129 nt-4.88□□□□□ -3.19
VMA21P41806 YDL159W-AYDL159W-A 132 nt-4.89□□□□□ -3.19
VMA21P41806 YJR162CYJR162C 351 nt-4.94□□□□□ -3.2
VMA21P41806 snR58snR58 96 nt-4.99□□□□□ -3.21
VMA21P41806 YDR034C-AYDR034C-A 177 nt-5.01□□□□□ -3.21
VMA21P41806 YMR046W-AYMR046W-A 129 nt-5.05□□□□□ -3.22
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms