Protein–RNA interactions for Protein: P40567

MSL1, U2 small nuclear ribonucleoprotein B'', yeastyeast

Predicted RBP Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSL1P40567 HTL1YCR020W-B 237 nt-3.23□□□□□ -2.93
MSL1P40567 BIL1YOR304C-A 231 nt-3.24□□□□□ -2.93
MSL1P40567 YDR543CYDR543C 300 nt-3.25□□□□□ -2.93
MSL1P40567 YAL068W-AYAL068W-A 255 nt-3.25□□□□□ -2.93
MSL1P40567 YOR376W-AYOR376W-A 156 nt-3.28□□□□□ -2.93
MSL1P40567 YEL014CYEL014C 306 nt-3.34□□□□□ -2.94
MSL1P40567 YJR157WYJR157W 363 nt-3.34□□□□□ -2.94
MSL1P40567 YBR196C-AYBR196C-A 150 nt-3.36□□□□□ -2.95
MSL1P40567 YOR329W-AYOR329W-A 210 nt-3.37□□□□□ -2.95
MSL1P40567 YAL016C-BYAL016C-B 186 nt-3.38□□□□□ -2.95
MSL1P40567 YMR172C-AYMR172C-A 384 nt-3.38□□□□□ -2.95
MSL1P40567 YKL063CYKL063C 504 nt-3.42□□□□□ -2.96
MSL1P40567 YLR299C-AYLR299C-A 93 nt-3.45□□□□□ -2.96
MSL1P40567 YLR342W-AYLR342W-A 174 nt-3.45□□□□□ -2.96
MSL1P40567 snR78snR78 87 nt-3.48□□□□□ -2.97
MSL1P40567 YOL013W-BYOL013W-B 291 nt-3.49□□□□□ -2.97
MSL1P40567 ATP19YOL077W-A 207 nt-3.52□□□□□ -2.97
MSL1P40567 YOR316C-AYOR316C-A 210 nt-3.54□□□□□ -2.98
MSL1P40567 YDR524W-CYDR524W-C 90 nt-3.55□□□□□ -2.98
MSL1P40567 YHR180C-BYHR180C-B 105 nt-3.61□□□□□ -2.99
MSL1P40567 YOL083C-AYOL083C-A 141 nt-3.62□□□□□ -2.99
MSL1P40567 YAL063C-AYAL063C-A 291 nt-3.63□□□□□ -2.99
MSL1P40567 YGR035CYGR035C 351 nt-3.64□□□□□ -2.99
MSL1P40567 YLR222C-AYLR222C-A 231 nt-3.64□□□□□ -2.99
MSL1P40567 YNR025CYNR025C 360 nt-3.66□□□□□ -3
MSL1P40567 YBR131C-AYBR131C-A 90 nt-3.68□□□□□ -3
MSL1P40567 snR55snR55 98 nt-3.71□□□□□ -3
MSL1P40567 YOR102WYOR102W 351 nt-3.72□□□□□ -3
MSL1P40567 YDR183C-AYDR183C-A 258 nt-3.73□□□□□ -3.01
MSL1P40567 YKL106C-AYKL106C-A 120 nt-3.73□□□□□ -3.01
MSL1P40567 YPR012WYPR012W 255 nt-3.73□□□□□ -3.01
MSL1P40567 YPR197CYPR197C 564 nt-3.74□□□□□ -3.01
MSL1P40567 YOL166W-AYOL166W-A 156 nt-3.77□□□□□ -3.01
MSL1P40567 tF(GAA)QtF(GAA)Q 75 nt-3.79□□□□□ -3.02
MSL1P40567 YER181CYER181C 324 nt-3.8□□□□□ -3.02
MSL1P40567 Q0142Q0142 177 nt-3.81□□□□□ -3.02
MSL1P40567 YGL188C-AYGL188C-A 141 nt-3.84□□□□□ -3.02
MSL1P40567 snR48snR48 113 nt-3.86□□□□□ -3.03
MSL1P40567 YPL038W-AYPL038W-A 192 nt-3.89□□□□□ -3.03
MSL1P40567 YKL118WYKL118W 312 nt-3.95□□□□□ -3.04
MSL1P40567 snR6snR6 112 nt-3.98□□□□□ -3.05
MSL1P40567 YDR413CYDR413C 576 nt-3.98□□□□□ -3.05
MSL1P40567 tL(UAA)QtL(UAA)Q 85 nt-3.98□□□□□ -3.05
MSL1P40567 YNL097C-BYNL097C-B 123 nt-4.02□□□□□ -3.05
MSL1P40567 YJL150WYJL150W 303 nt-4.07□□□□□ -3.06
MSL1P40567 YBR109W-AYBR109W-A 225 nt-4.1□□□□□ -3.07
MSL1P40567 YOL155W-AYOL155W-A 135 nt-4.15□□□□□ -3.07
MSL1P40567 snR80snR80 171 nt-4.16□□□□□ -3.08
MSL1P40567 tR(UCU)Q1tR(UCU)Q1 73 nt-4.16□□□□□ -3.08
MSL1P40567 snR73snR73 106 nt-4.19□□□□□ -3.08
MSL1P40567 YOR335W-AYOR335W-A 81 nt-4.2□□□□□ -3.08
MSL1P40567 RPL39YJL189W 156 nt-4.23□□□□□ -3.09
MSL1P40567 RPL41BYDL133C-A 78 nt-4.24□□□□□ -3.09
MSL1P40567 GIM4YEL003W 336 nt-4.26□□□□□ -3.09
MSL1P40567 YNL277W-AYNL277W-A 189 nt-4.26□□□□□ -3.09
MSL1P40567 YBR296C-AYBR296C-A 120 nt-4.26□□□□□ -3.09
MSL1P40567 YHL015W-AYHL015W-A 84 nt-4.28□□□□□ -3.09
MSL1P40567 RPL41AYDL184C 78 nt-4.3□□□□□ -3.1
MSL1P40567 snR56snR56 88 nt-4.35□□□□□ -3.11
MSL1P40567 snR52snR52 92 nt-4.38□□□□□ -3.11
MSL1P40567 YDR524C-AYDR524C-A 120 nt-4.42□□□□□ -3.12
MSL1P40567 YNL198CYNL198C 303 nt-4.43□□□□□ -3.12
MSL1P40567 YEL050W-AYEL050W-A 192 nt-4.44□□□□□ -3.12
MSL1P40567 YOR302WYOR302W 78 nt-4.45□□□□□ -3.12
MSL1P40567 YJR162CYJR162C 351 nt-4.47□□□□□ -3.13
MSL1P40567 YNL337WYNL337W 255 nt-4.47□□□□□ -3.13
MSL1P40567 snR38snR38 95 nt-4.49□□□□□ -3.13
MSL1P40567 SOM1YEL059C-A 225 nt-4.6□□□□□ -3.15
MSL1P40567 YDL240C-AYDL240C-A 138 nt-4.61□□□□□ -3.15
MSL1P40567 YDR406W-AYDR406W-A 246 nt-4.69□□□□□ -3.16
MSL1P40567 YDR157WYDR157W 402 nt-4.74□□□□□ -3.17
MSL1P40567 YCR095W-AYCR095W-A 159 nt-4.82□□□□□ -3.18
MSL1P40567 YPL152W-AYPL152W-A 99 nt-4.88□□□□□ -3.19
MSL1P40567 YBL071C-BYBL071C-B 99 nt-4.89□□□□□ -3.19
MSL1P40567 snR85snR85 171 nt-4.9□□□□□ -3.19
MSL1P40567 YOL164W-AYOL164W-A 183 nt-4.9□□□□□ -3.19
MSL1P40567 YDL114W-AYDL114W-A 114 nt-4.96□□□□□ -3.2
MSL1P40567 YGR151CYGR151C 336 nt-4.96□□□□□ -3.2
MSL1P40567 tV(UAC)QtV(UAC)Q 76 nt-4.96□□□□□ -3.2
MSL1P40567 snR47snR47 99 nt-4.98□□□□□ -3.21
MSL1P40567 snR87snR87 109 nt-5.09□□□□□ -3.22
MSL1P40567 YBL053WYBL053W 375 nt-5.1□□□□□ -3.23
MSL1P40567 snR65snR65 100 nt-5.11□□□□□ -3.23
MSL1P40567 YDR118W-AYDR118W-A 117 nt-5.12□□□□□ -3.23
MSL1P40567 YBL100W-CYBL100W-C 120 nt-5.17□□□□□ -3.24
MSL1P40567 YAL037C-AYAL037C-A 93 nt-5.23□□□□□ -3.25
MSL1P40567 YKL225WYKL225W 348 nt-5.28□□□□□ -3.25
MSL1P40567 SPG3YDR504C 384 nt-5.31□□□□□ -3.26
MSL1P40567 Q0017Q0017 162 nt-5.44□□□□□ -3.28
MSL1P40567 tS(GCU)Q1tS(GCU)Q1 86 nt-5.47□□□□□ -3.29
MSL1P40567 YKL096C-BYKL096C-B 150 nt-5.55□□□□□ -3.3
MSL1P40567 YHR175W-AYHR175W-A 150 nt-5.56□□□□□ -3.3
MSL1P40567 snR58snR58 96 nt-5.63□□□□□ -3.31
MSL1P40567 VAR1Q0140 1197 nt-5.64□□□□□ -3.31
MSL1P40567 YCL001W-BYCL001W-B 255 nt-5.73□□□□□ -3.33
MSL1P40567 YGR122C-AYGR122C-A 129 nt-5.74□□□□□ -3.33
MSL1P40567 YOR231C-AYOR231C-A 201 nt-5.77□□□□□ -3.33
MSL1P40567 YDL159W-AYDL159W-A 132 nt-5.84□□□□□ -3.34
MSL1P40567 YDR034C-AYDR034C-A 177 nt-5.86□□□□□ -3.35
MSL1P40567 YJL136W-AYJL136W-A 84 nt-6.05□□□□□ -3.38
Retrieved 100 of 7,029 protein–RNA pairs in 23.6 ms