Protein–RNA interactions for Protein: P40561

SGN1, RNA-binding protein SGN1, yeastyeast

Known RBP RIP-Chip data

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGN1P40561 YHL015W-AYHL015W-A 84 nt0.24□□□□□ -2.37
SGN1P40561 YNL054W-BYNL054W-B 5250 nt0.23□□□□□ -2.37
SGN1P40561 YDR210WYDR210W 228 nt0.23□□□□□ -2.37
SGN1P40561 snR39BsnR39B 96 nt0.23□□□□□ -2.37
SGN1P40561 YJL150WYJL150W 303 nt0.2□□□□□ -2.38
SGN1P40561 YGR146C-AYGR146C-A 162 nt0.19□□□□□ -2.38
SGN1P40561 YOR329W-AYOR329W-A 210 nt0.19□□□□□ -2.38
SGN1P40561 YOR102WYOR102W 351 nt0.18□□□□□ -2.38
SGN1P40561 YER078W-AYER078W-A 165 nt0.17□□□□□ -2.38
SGN1P40561 THO2YNL139C 4794 nt0.16□□□□□ -2.38
SGN1P40561 YJL077W-AYJL077W-A 87 nt0.16□□□□□ -2.38
SGN1P40561 YDL007C-AYDL007C-A 258 nt0.13□□□□□ -2.39
SGN1P40561 YNL337WYNL337W 255 nt0.13□□□□□ -2.39
SGN1P40561 EST1YLR233C 2100 nt0.12□□□□□ -2.39
SGN1P40561 YNL067W-BYNL067W-B 141 nt0.08□□□□□ -2.4
SGN1P40561 tL(UAA)QtL(UAA)Q 85 nt0.07□□□□□ -2.4
SGN1P40561 YGR151CYGR151C 336 nt0.06□□□□□ -2.4
SGN1P40561 YLR466C-BYLR466C-B 117 nt0.06□□□□□ -2.4
SGN1P40561 YPL060C-AYPL060C-A 3315 nt0.05□□□□□ -2.4
SGN1P40561 SOV1YMR066W 2697 nt0.05□□□□□ -2.4
SGN1P40561 YNL205CYNL205C 423 nt0.03□□□□□ -2.4
SGN1P40561 snR128snR128 126 nt0.03□□□□□ -2.4
SGN1P40561 YNL198CYNL198C 303 nt0.01□□□□□ -2.41
SGN1P40561 snR45snR45 172 nt0.01□□□□□ -2.41
SGN1P40561 Q0032Q0032 291 nt-0.01□□□□□ -2.41
SGN1P40561 snR69snR69 101 nt-0.01□□□□□ -2.41
SGN1P40561 PMP2YEL017C-A 132 nt-0.01□□□□□ -2.41
SGN1P40561 tQ(UUG)QtQ(UUG)Q 76 nt-0.04□□□□□ -2.42
SGN1P40561 RDS3YPR094W 324 nt-0.05□□□□□ -2.42
SGN1P40561 YGR164WYGR164W 336 nt-0.07□□□□□ -2.42
SGN1P40561 SEC10YLR166C 2616 nt-0.11□□□□□ -2.43
SGN1P40561 YNL338WYNL338W 159 nt-0.12□□□□□ -2.43
SGN1P40561 tD(GUC)QtD(GUC)Q 75 nt-0.14□□□□□ -2.43
SGN1P40561 YCR095W-AYCR095W-A 159 nt-0.15□□□□□ -2.43
SGN1P40561 SOM1YEL059C-A 225 nt-0.15□□□□□ -2.43
SGN1P40561 YBL053WYBL053W 375 nt-0.15□□□□□ -2.43
SGN1P40561 YGL007C-AYGL007C-A 87 nt-0.16□□□□□ -2.44
SGN1P40561 TFB5YDR079C-A 219 nt-0.17□□□□□ -2.44
SGN1P40561 YER090C-AYER090C-A 90 nt-0.2□□□□□ -2.44
SGN1P40561 YNL266WYNL266W 420 nt-0.2□□□□□ -2.44
SGN1P40561 SBH2YER019C-A 267 nt-0.22□□□□□ -2.44
SGN1P40561 YML100W-AYML100W-A 174 nt-0.23□□□□□ -2.45
SGN1P40561 YBR196C-AYBR196C-A 150 nt-0.23□□□□□ -2.45
SGN1P40561 YLR286W-AYLR286W-A 135 nt-0.24□□□□□ -2.45
SGN1P40561 YBR178WYBR178W 375 nt-0.24□□□□□ -2.45
SGN1P40561 YDL159C-BYDL159C-B 177 nt-0.27□□□□□ -2.45
SGN1P40561 YIL071W-AYIL071W-A 477 nt-0.3□□□□□ -2.46
SGN1P40561 snR50snR50 90 nt-0.31□□□□□ -2.46
SGN1P40561 URB1YKL014C 5295 nt-0.33□□□□□ -2.46
SGN1P40561 YJL113WYJL113W 4647 nt-0.35□□□□□ -2.47
SGN1P40561 YLR299C-AYLR299C-A 93 nt-0.36□□□□□ -2.47
SGN1P40561 snR67snR67 82 nt-0.37□□□□□ -2.47
SGN1P40561 PAU9YBL108C-A 129 nt-0.38□□□□□ -2.47
SGN1P40561 YOR225WYOR225W 330 nt-0.4□□□□□ -2.47
SGN1P40561 YCL001W-BYCL001W-B 255 nt-0.4□□□□□ -2.47
SGN1P40561 YLR294CYLR294C 330 nt-0.43□□□□□ -2.48
SGN1P40561 tA(UGC)QtA(UGC)Q 76 nt-0.45□□□□□ -2.48
SGN1P40561 YHL009W-BYHL009W-B 5409 nt-0.5□□□□□ -2.49
SGN1P40561 YHR180C-BYHR180C-B 105 nt-0.6□□□□□ -2.51
SGN1P40561 tT(UGU)G1tT(UGU)G1 72 nt-0.63□□□□□ -2.51
SGN1P40561 tT(UGU)G2tT(UGU)G2 72 nt-0.63□□□□□ -2.51
SGN1P40561 tT(UGU)PtT(UGU)P 72 nt-0.63□□□□□ -2.51
SGN1P40561 YML054C-AYML054C-A 159 nt-0.63□□□□□ -2.51
SGN1P40561 snR33snR33 183 nt-0.68□□□□□ -2.52
SGN1P40561 SKI7YOR076C 2244 nt-0.68□□□□□ -2.52
SGN1P40561 YAL037C-AYAL037C-A 93 nt-0.69□□□□□ -2.52
SGN1P40561 YNL170WYNL170W 396 nt-0.7□□□□□ -2.52
SGN1P40561 YOL083C-AYOL083C-A 141 nt-0.71□□□□□ -2.52
SGN1P40561 snR161snR161 161 nt-0.75□□□□□ -2.53
SGN1P40561 YBL100W-CYBL100W-C 120 nt-0.76□□□□□ -2.53
SGN1P40561 YBL071C-BYBL071C-B 99 nt-0.79□□□□□ -2.54
SGN1P40561 ATP8Q0080 147 nt-0.8□□□□□ -2.54
SGN1P40561 YOL164W-AYOL164W-A 183 nt-0.83□□□□□ -2.54
SGN1P40561 snR81snR81 201 nt-0.85□□□□□ -2.55
SGN1P40561 RPL41AYDL184C 78 nt-0.85□□□□□ -2.55
SGN1P40561 YBR296C-AYBR296C-A 120 nt-0.85□□□□□ -2.55
SGN1P40561 snR61snR61 90 nt-0.87□□□□□ -2.55
SGN1P40561 YNR077CYNR077C 255 nt-0.88□□□□□ -2.55
SGN1P40561 YBR223W-AYBR223W-A 120 nt-0.88□□□□□ -2.55
SGN1P40561 YBR109W-AYBR109W-A 225 nt-0.93□□□□□ -2.56
SGN1P40561 YGL041C-BYGL041C-B 183 nt-0.94□□□□□ -2.56
SGN1P40561 YGR240C-AYGR240C-A 201 nt-0.95□□□□□ -2.56
SGN1P40561 YNL103W-AYNL103W-A 90 nt-0.96□□□□□ -2.56
SGN1P40561 snR47snR47 99 nt-0.97□□□□□ -2.56
SGN1P40561 Q0092Q0092 141 nt-1□□□□□ -2.57
SGN1P40561 YKL106C-AYKL106C-A 120 nt-1.01□□□□□ -2.57
SGN1P40561 tP(UGG)QtP(UGG)Q 72 nt-1.07□□□□□ -2.58
SGN1P40561 YOR376W-AYOR376W-A 156 nt-1.08□□□□□ -2.58
SGN1P40561 snR38snR38 95 nt-1.13□□□□□ -2.59
SGN1P40561 YOR316C-AYOR316C-A 210 nt-1.14□□□□□ -2.59
SGN1P40561 snR62snR62 100 nt-1.22□□□□□ -2.6
SGN1P40561 Q0143Q0143 153 nt-1.22□□□□□ -2.6
SGN1P40561 YKL225WYKL225W 348 nt-1.24□□□□□ -2.61
SGN1P40561 tS(GCU)Q1tS(GCU)Q1 86 nt-1.25□□□□□ -2.61
SGN1P40561 YDR034C-AYDR034C-A 177 nt-1.26□□□□□ -2.61
SGN1P40561 tY(GUA)QtY(GUA)Q 84 nt-1.3□□□□□ -2.62
SGN1P40561 CDC65tQ(CUG)M 72 nt-1.33□□□□□ -2.62
SGN1P40561 YMR326CYMR326C 309 nt-1.33□□□□□ -2.62
SGN1P40561 snR77snR77 88 nt-1.39□□□□□ -2.63
SGN1P40561 YHR217CYHR217C 462 nt-1.42□□□□□ -2.64
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms