Protein–RNA interactions for Protein: P40479

SDP1, Dual-specificity protein phosphatase SDP1, yeastyeast

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDP1P40479 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
SDP1P40479 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
SDP1P40479 SCC2YDR180W 4482 nt0.99□□□□□ -2.25
SDP1P40479 tV(UAC)BtV(UAC)B 74 nt0.98□□□□□ -2.25
SDP1P40479 tV(UAC)DtV(UAC)D 74 nt0.98□□□□□ -2.25
SDP1P40479 YOR192C-BYOR192C-B 5313 nt0.98□□□□□ -2.25
SDP1P40479 VAM6YDL077C 3150 nt0.97□□□□□ -2.25
SDP1P40479 SIP4YJL089W 2490 nt0.96□□□□□ -2.26
SDP1P40479 YBL100W-CYBL100W-C 120 nt0.96□□□□□ -2.26
SDP1P40479 YOL164W-AYOL164W-A 183 nt0.96□□□□□ -2.26
SDP1P40479 YPR117WYPR117W 7470 nt0.95□□□□□ -2.26
SDP1P40479 BUL2YML111W 2763 nt0.94□□□□□ -2.26
SDP1P40479 YJR029WYJR029W 5268 nt0.94□□□□□ -2.26
SDP1P40479 YPR137C-BYPR137C-B 5268 nt0.94□□□□□ -2.26
SDP1P40479 RDS3YPR094W 324 nt0.93□□□□□ -2.26
SDP1P40479 MYO1YHR023W 5787 nt0.92□□□□□ -2.26
SDP1P40479 YPL060C-AYPL060C-A 3315 nt0.91□□□□□ -2.26
SDP1P40479 YDL159C-BYDL159C-B 177 nt0.91□□□□□ -2.26
SDP1P40479 YJL077W-AYJL077W-A 87 nt0.91□□□□□ -2.26
SDP1P40479 YLR299C-AYLR299C-A 93 nt0.91□□□□□ -2.26
SDP1P40479 LTE1YAL024C 4308 nt0.9□□□□□ -2.27
SDP1P40479 YGR240C-AYGR240C-A 201 nt0.9□□□□□ -2.27
SDP1P40479 YDR034C-AYDR034C-A 177 nt0.89□□□□□ -2.27
SDP1P40479 PAU12YGR294W 363 nt0.89□□□□□ -2.27
SDP1P40479 IML1YJR138W 4755 nt0.88□□□□□ -2.27
SDP1P40479 PET111YMR257C 2403 nt0.87□□□□□ -2.27
SDP1P40479 YDR371C-AYDR371C-A 105 nt0.86□□□□□ -2.27
SDP1P40479 snR47snR47 99 nt0.85□□□□□ -2.27
SDP1P40479 tQ(UUG)QtQ(UUG)Q 76 nt0.84□□□□□ -2.27
SDP1P40479 BEM2YER155C 6504 nt0.82□□□□□ -2.28
SDP1P40479 PAU24YBR301W 363 nt0.82□□□□□ -2.28
SDP1P40479 ORC3YLL004W 1851 nt0.79□□□□□ -2.28
SDP1P40479 DOP1YDR141C 5097 nt0.76□□□□□ -2.29
SDP1P40479 YML054C-AYML054C-A 159 nt0.74□□□□□ -2.29
SDP1P40479 YNL054W-BYNL054W-B 5250 nt0.73□□□□□ -2.29
SDP1P40479 YHR180C-BYHR180C-B 105 nt0.73□□□□□ -2.29
SDP1P40479 MLP1YKR095W 5628 nt0.72□□□□□ -2.29
SDP1P40479 YER090C-AYER090C-A 90 nt0.7□□□□□ -2.3
SDP1P40479 snR50snR50 90 nt0.7□□□□□ -2.3
SDP1P40479 YBL100W-BYBL100W-B 5313 nt0.68□□□□□ -2.3
SDP1P40479 YPR159C-AYPR159C-A 102 nt0.67□□□□□ -2.3
SDP1P40479 YBR109W-AYBR109W-A 225 nt0.64□□□□□ -2.31
SDP1P40479 AI1Q0050 2505 nt0.64□□□□□ -2.31
SDP1P40479 RPL41AYDL184C 78 nt0.63□□□□□ -2.31
SDP1P40479 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
SDP1P40479 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
SDP1P40479 IQG1YPL242C 4488 nt0.59□□□□□ -2.31
SDP1P40479 YBR296C-AYBR296C-A 120 nt0.59□□□□□ -2.31
SDP1P40479 YKL225WYKL225W 348 nt0.58□□□□□ -2.32
SDP1P40479 snR64snR64 101 nt0.57□□□□□ -2.32
SDP1P40479 YOR186C-AYOR186C-A 210 nt0.57□□□□□ -2.32
SDP1P40479 YMR160WYMR160W 2451 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)BtT(AGU)B 73 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)CtT(AGU)C 73 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)DtT(AGU)D 73 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)HtT(AGU)H 73 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)I1tT(AGU)I1 73 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)I2tT(AGU)I2 73 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)JtT(AGU)J 73 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)N1tT(AGU)N1 73 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)N2tT(AGU)N2 73 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)O1tT(AGU)O1 73 nt0.56□□□□□ -2.32
SDP1P40479 tT(AGU)O2tT(AGU)O2 73 nt0.56□□□□□ -2.32
SDP1P40479 snR67snR67 82 nt0.53□□□□□ -2.32
SDP1P40479 snR38snR38 95 nt0.53□□□□□ -2.32
SDP1P40479 MLP2YIL149C 5040 nt0.5□□□□□ -2.33
SDP1P40479 snR53snR53 91 nt0.49□□□□□ -2.33
SDP1P40479 UTP20YBL004W 7482 nt0.43□□□□□ -2.34
SDP1P40479 FMP27YLR454W 7887 nt0.4□□□□□ -2.35
SDP1P40479 SOV1YMR066W 2697 nt0.38□□□□□ -2.35
SDP1P40479 YML100W-AYML100W-A 174 nt0.35□□□□□ -2.35
SDP1P40479 SKI7YOR076C 2244 nt0.35□□□□□ -2.35
SDP1P40479 YOL013W-AYOL013W-A 192 nt0.31□□□□□ -2.36
SDP1P40479 YDL159W-AYDL159W-A 132 nt0.3□□□□□ -2.36
SDP1P40479 tF(GAA)BtF(GAA)B 73 nt0.3□□□□□ -2.36
SDP1P40479 tF(GAA)FtF(GAA)F 73 nt0.3□□□□□ -2.36
SDP1P40479 tF(GAA)GtF(GAA)G 73 nt0.3□□□□□ -2.36
SDP1P40479 tF(GAA)H1tF(GAA)H1 73 nt0.3□□□□□ -2.36
SDP1P40479 tF(GAA)H2tF(GAA)H2 73 nt0.3□□□□□ -2.36
SDP1P40479 tF(GAA)MtF(GAA)M 73 nt0.3□□□□□ -2.36
SDP1P40479 tF(GAA)P1tF(GAA)P1 73 nt0.3□□□□□ -2.36
SDP1P40479 tF(GAA)P2tF(GAA)P2 73 nt0.3□□□□□ -2.36
SDP1P40479 ESP1YGR098C 4893 nt0.3□□□□□ -2.36
SDP1P40479 YKL145W-AYKL145W-A 93 nt0.29□□□□□ -2.36
SDP1P40479 snR128snR128 126 nt0.29□□□□□ -2.36
SDP1P40479 THO2YNL139C 4794 nt0.27□□□□□ -2.37
SDP1P40479 YGR122C-AYGR122C-A 129 nt0.23□□□□□ -2.37
SDP1P40479 YKL106C-AYKL106C-A 120 nt0.2□□□□□ -2.38
SDP1P40479 YOL014WYOL014W 375 nt0.18□□□□□ -2.38
SDP1P40479 PAU9YBL108C-A 129 nt0.16□□□□□ -2.38
SDP1P40479 YLR149C-AYLR149C-A 87 nt0.11□□□□□ -2.39
SDP1P40479 YOR376W-AYOR376W-A 156 nt0.04□□□□□ -2.4
SDP1P40479 YER078W-AYER078W-A 165 nt0.02□□□□□ -2.41
SDP1P40479 tA(UGC)QtA(UGC)Q 76 nt-0.02□□□□□ -2.41
SDP1P40479 YDL114W-AYDL114W-A 114 nt-0.03□□□□□ -2.41
SDP1P40479 YOR316C-AYOR316C-A 210 nt-0.06□□□□□ -2.42
SDP1P40479 YKL096C-BYKL096C-B 150 nt-0.08□□□□□ -2.42
SDP1P40479 SBH2YER019C-A 267 nt-0.1□□□□□ -2.43
SDP1P40479 tV(UAC)QtV(UAC)Q 76 nt-0.11□□□□□ -2.43
SDP1P40479 snR77snR77 88 nt-0.18□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 52.6 ms