Protein–RNA interactions for Protein: P40202

CCS1, Superoxide dismutase 1 copper chaperone, yeastyeast

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCS1P40202 YLR222C-AYLR222C-A 231 nt-1.1□□□□□ -2.59
CCS1P40202 snR161snR161 161 nt-1.11□□□□□ -2.59
CCS1P40202 YBR131C-AYBR131C-A 90 nt-1.14□□□□□ -2.59
CCS1P40202 snR39BsnR39B 96 nt-1.14□□□□□ -2.59
CCS1P40202 SKI7YOR076C 2244 nt-1.15□□□□□ -2.59
CCS1P40202 tF(GAA)QtF(GAA)Q 75 nt-1.15□□□□□ -2.59
CCS1P40202 YGR146C-AYGR146C-A 162 nt-1.15□□□□□ -2.59
CCS1P40202 YDR413CYDR413C 576 nt-1.17□□□□□ -2.6
CCS1P40202 RPL39YJL189W 156 nt-1.17□□□□□ -2.6
CCS1P40202 snR67snR67 82 nt-1.2□□□□□ -2.6
CCS1P40202 YOR329W-AYOR329W-A 210 nt-1.2□□□□□ -2.6
CCS1P40202 YDL240C-AYDL240C-A 138 nt-1.21□□□□□ -2.6
CCS1P40202 YER181CYER181C 324 nt-1.21□□□□□ -2.6
CCS1P40202 YBR223W-AYBR223W-A 120 nt-1.21□□□□□ -2.6
CCS1P40202 YDR118W-AYDR118W-A 117 nt-1.22□□□□□ -2.6
CCS1P40202 tD(GUC)QtD(GUC)Q 75 nt-1.23□□□□□ -2.61
CCS1P40202 YNL277W-AYNL277W-A 189 nt-1.23□□□□□ -2.61
CCS1P40202 YNL097C-BYNL097C-B 123 nt-1.24□□□□□ -2.61
CCS1P40202 YKL118WYKL118W 312 nt-1.25□□□□□ -2.61
CCS1P40202 VAR1Q0140 1197 nt-1.26□□□□□ -2.61
CCS1P40202 YLR286W-AYLR286W-A 135 nt-1.27□□□□□ -2.61
CCS1P40202 YBR178WYBR178W 375 nt-1.28□□□□□ -2.61
CCS1P40202 snR55snR55 98 nt-1.29□□□□□ -2.62
CCS1P40202 YDL159C-BYDL159C-B 177 nt-1.34□□□□□ -2.62
CCS1P40202 GIM4YEL003W 336 nt-1.34□□□□□ -2.62
CCS1P40202 YML054C-AYML054C-A 159 nt-1.35□□□□□ -2.63
CCS1P40202 YNL205CYNL205C 423 nt-1.36□□□□□ -2.63
CCS1P40202 YPR012WYPR012W 255 nt-1.36□□□□□ -2.63
CCS1P40202 CDC65tQ(CUG)M 72 nt-1.37□□□□□ -2.63
CCS1P40202 snR77snR77 88 nt-1.38□□□□□ -2.63
CCS1P40202 YOR302WYOR302W 78 nt-1.41□□□□□ -2.64
CCS1P40202 tL(UAA)QtL(UAA)Q 85 nt-1.42□□□□□ -2.64
CCS1P40202 snR48snR48 113 nt-1.43□□□□□ -2.64
CCS1P40202 YNR077CYNR077C 255 nt-1.44□□□□□ -2.64
CCS1P40202 YOL155W-AYOL155W-A 135 nt-1.44□□□□□ -2.64
CCS1P40202 tY(GUA)QtY(GUA)Q 84 nt-1.45□□□□□ -2.64
CCS1P40202 YGR240C-AYGR240C-A 201 nt-1.46□□□□□ -2.64
CCS1P40202 YLR299C-AYLR299C-A 93 nt-1.5□□□□□ -2.65
CCS1P40202 YGL188C-AYGL188C-A 141 nt-1.51□□□□□ -2.65
CCS1P40202 YOR102WYOR102W 351 nt-1.51□□□□□ -2.65
CCS1P40202 YPL152W-AYPL152W-A 99 nt-1.53□□□□□ -2.65
CCS1P40202 YOR376W-AYOR376W-A 156 nt-1.55□□□□□ -2.66
CCS1P40202 snR52snR52 92 nt-1.55□□□□□ -2.66
CCS1P40202 YMR315W-AYMR315W-A 108 nt-1.56□□□□□ -2.66
CCS1P40202 snR65snR65 100 nt-1.57□□□□□ -2.66
CCS1P40202 snR81snR81 201 nt-1.57□□□□□ -2.66
CCS1P40202 YBR196C-AYBR196C-A 150 nt-1.58□□□□□ -2.66
CCS1P40202 YLR342W-AYLR342W-A 174 nt-1.6□□□□□ -2.67
CCS1P40202 YHL015W-AYHL015W-A 84 nt-1.62□□□□□ -2.67
CCS1P40202 Q0144Q0144 330 nt-1.64□□□□□ -2.67
CCS1P40202 snR80snR80 171 nt-1.72□□□□□ -2.68
CCS1P40202 YHR180C-BYHR180C-B 105 nt-1.74□□□□□ -2.69
CCS1P40202 YHR175W-AYHR175W-A 150 nt-1.76□□□□□ -2.69
CCS1P40202 YJL150WYJL150W 303 nt-1.77□□□□□ -2.69
CCS1P40202 YNL198CYNL198C 303 nt-1.78□□□□□ -2.69
CCS1P40202 YOR316C-AYOR316C-A 210 nt-1.78□□□□□ -2.69
CCS1P40202 YOR309CYOR309C 381 nt-1.81□□□□□ -2.7
CCS1P40202 YKL106C-AYKL106C-A 120 nt-1.83□□□□□ -2.7
CCS1P40202 YBL053WYBL053W 375 nt-1.83□□□□□ -2.7
CCS1P40202 YOR231C-AYOR231C-A 201 nt-1.83□□□□□ -2.7
CCS1P40202 tR(ACG)Q2tR(ACG)Q2 74 nt-1.87□□□□□ -2.71
CCS1P40202 SOM1YEL059C-A 225 nt-1.9□□□□□ -2.71
CCS1P40202 YBR109W-AYBR109W-A 225 nt-1.9□□□□□ -2.71
CCS1P40202 snR56snR56 88 nt-1.91□□□□□ -2.72
CCS1P40202 YDR406W-AYDR406W-A 246 nt-1.93□□□□□ -2.72
CCS1P40202 YBR296C-AYBR296C-A 120 nt-1.97□□□□□ -2.72
CCS1P40202 snR38snR38 95 nt-1.98□□□□□ -2.73
CCS1P40202 RPL41AYDL184C 78 nt-2.01□□□□□ -2.73
CCS1P40202 YCR095W-AYCR095W-A 159 nt-2.03□□□□□ -2.73
CCS1P40202 YBR126W-BYBR126W-B 144 nt-2.06□□□□□ -2.74
CCS1P40202 YBL071C-BYBL071C-B 99 nt-2.07□□□□□ -2.74
CCS1P40202 snR6snR6 112 nt-2.08□□□□□ -2.74
CCS1P40202 YDR524W-CYDR524W-C 90 nt-2.09□□□□□ -2.74
CCS1P40202 YOL083C-AYOL083C-A 141 nt-2.09□□□□□ -2.74
CCS1P40202 YGR151CYGR151C 336 nt-2.11□□□□□ -2.75
CCS1P40202 YOL164W-AYOL164W-A 183 nt-2.16□□□□□ -2.76
CCS1P40202 YOR335W-AYOR335W-A 81 nt-2.19□□□□□ -2.76
CCS1P40202 snR73snR73 106 nt-2.24□□□□□ -2.77
CCS1P40202 snR47snR47 99 nt-2.25□□□□□ -2.77
CCS1P40202 YAL037C-AYAL037C-A 93 nt-2.3□□□□□ -2.78
CCS1P40202 YCL001W-BYCL001W-B 255 nt-2.33□□□□□ -2.78
CCS1P40202 YMR046W-AYMR046W-A 129 nt-2.34□□□□□ -2.78
CCS1P40202 RPL41BYDL133C-A 78 nt-2.39□□□□□ -2.79
CCS1P40202 SPG3YDR504C 384 nt-2.4□□□□□ -2.79
CCS1P40202 tV(UAC)QtV(UAC)Q 76 nt-2.42□□□□□ -2.8
CCS1P40202 YBL100W-CYBL100W-C 120 nt-2.43□□□□□ -2.8
CCS1P40202 tS(GCU)Q1tS(GCU)Q1 86 nt-2.44□□□□□ -2.8
CCS1P40202 YKL225WYKL225W 348 nt-2.46□□□□□ -2.8
CCS1P40202 YDL114W-AYDL114W-A 114 nt-2.47□□□□□ -2.8
CCS1P40202 YLR466C-BYLR466C-B 117 nt-2.56□□□□□ -2.82
CCS1P40202 YNL337WYNL337W 255 nt-2.56□□□□□ -2.82
CCS1P40202 snR85snR85 171 nt-2.59□□□□□ -2.82
CCS1P40202 YNL338WYNL338W 159 nt-2.63□□□□□ -2.83
CCS1P40202 tM(CAU)Q1tM(CAU)Q1 76 nt-2.64□□□□□ -2.83
CCS1P40202 YDR524C-AYDR524C-A 120 nt-2.72□□□□□ -2.84
CCS1P40202 YDL159W-AYDL159W-A 132 nt-2.73□□□□□ -2.85
CCS1P40202 YDR034C-AYDR034C-A 177 nt-2.77□□□□□ -2.85
CCS1P40202 YGL041C-BYGL041C-B 183 nt-2.78□□□□□ -2.85
CCS1P40202 YGR122C-AYGR122C-A 129 nt-2.78□□□□□ -2.85
CCS1P40202 YGL007C-AYGL007C-A 87 nt-2.81□□□□□ -2.86
Retrieved 100 of 7,029 protein–RNA pairs in 32.7 ms