Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 YMR172C-AYMR172C-A 384 nt-2.6□□□□□ -2.83
RPB11P38902 YDL159C-BYDL159C-B 177 nt-2.62□□□□□ -2.83
RPB11P38902 YBR178WYBR178W 375 nt-2.62□□□□□ -2.83
RPB11P38902 YEL014CYEL014C 306 nt-2.64□□□□□ -2.83
RPB11P38902 YGR035CYGR035C 351 nt-2.65□□□□□ -2.83
RPB11P38902 tR(UCU)Q1tR(UCU)Q1 73 nt-2.66□□□□□ -2.84
RPB11P38902 YAL063C-AYAL063C-A 291 nt-2.67□□□□□ -2.84
RPB11P38902 YBR182C-AYBR182C-A 195 nt-2.72□□□□□ -2.84
RPB11P38902 YOR329W-AYOR329W-A 210 nt-2.73□□□□□ -2.85
RPB11P38902 YBR126W-BYBR126W-B 144 nt-2.73□□□□□ -2.85
RPB11P38902 YAL016C-BYAL016C-B 186 nt-2.77□□□□□ -2.85
RPB11P38902 YAL068W-AYAL068W-A 255 nt-2.8□□□□□ -2.86
RPB11P38902 YDR183C-AYDR183C-A 258 nt-2.82□□□□□ -2.86
RPB11P38902 YJR157WYJR157W 363 nt-2.82□□□□□ -2.86
RPB11P38902 snR78snR78 87 nt-2.87□□□□□ -2.87
RPB11P38902 YOR376W-AYOR376W-A 156 nt-2.89□□□□□ -2.87
RPB11P38902 YBR131C-AYBR131C-A 90 nt-2.9□□□□□ -2.87
RPB11P38902 YLR299C-AYLR299C-A 93 nt-2.91□□□□□ -2.88
RPB11P38902 YBR196C-AYBR196C-A 150 nt-2.91□□□□□ -2.88
RPB11P38902 YOR293C-AYOR293C-A 150 nt-2.95□□□□□ -2.88
RPB11P38902 tF(GAA)QtF(GAA)Q 75 nt-2.97□□□□□ -2.88
RPB11P38902 YER181CYER181C 324 nt-2.97□□□□□ -2.88
RPB11P38902 YLR222C-AYLR222C-A 231 nt-3□□□□□ -2.89
RPB11P38902 YOR309CYOR309C 381 nt-3□□□□□ -2.89
RPB11P38902 YEL050W-AYEL050W-A 192 nt-3.01□□□□□ -2.89
RPB11P38902 YPL038W-AYPL038W-A 192 nt-3.04□□□□□ -2.9
RPB11P38902 YOR102WYOR102W 351 nt-3.07□□□□□ -2.9
RPB11P38902 YDR413CYDR413C 576 nt-3.12□□□□□ -2.91
RPB11P38902 YPR197CYPR197C 564 nt-3.12□□□□□ -2.91
RPB11P38902 snR48snR48 113 nt-3.13□□□□□ -2.91
RPB11P38902 YHR180C-BYHR180C-B 105 nt-3.14□□□□□ -2.91
RPB11P38902 YLR342W-AYLR342W-A 174 nt-3.14□□□□□ -2.91
RPB11P38902 YOR316C-AYOR316C-A 210 nt-3.14□□□□□ -2.91
RPB11P38902 YGL188C-AYGL188C-A 141 nt-3.15□□□□□ -2.91
RPB11P38902 YNL097C-BYNL097C-B 123 nt-3.18□□□□□ -2.92
RPB11P38902 snR55snR55 98 nt-3.23□□□□□ -2.93
RPB11P38902 RPL39YJL189W 156 nt-3.23□□□□□ -2.93
RPB11P38902 YKL118WYKL118W 312 nt-3.23□□□□□ -2.93
RPB11P38902 tL(UAA)QtL(UAA)Q 85 nt-3.24□□□□□ -2.93
RPB11P38902 YKL106C-AYKL106C-A 120 nt-3.26□□□□□ -2.93
RPB11P38902 YNL277W-AYNL277W-A 189 nt-3.28□□□□□ -2.93
RPB11P38902 YPR012WYPR012W 255 nt-3.3□□□□□ -2.94
RPB11P38902 YDR524W-CYDR524W-C 90 nt-3.35□□□□□ -2.95
RPB11P38902 YJL150WYJL150W 303 nt-3.45□□□□□ -2.96
RPB11P38902 YHL015W-AYHL015W-A 84 nt-3.47□□□□□ -2.96
RPB11P38902 YDL240C-AYDL240C-A 138 nt-3.5□□□□□ -2.97
RPB11P38902 YDR157WYDR157W 402 nt-3.5□□□□□ -2.97
RPB11P38902 YDR543CYDR543C 300 nt-3.51□□□□□ -2.97
RPB11P38902 YOL155W-AYOL155W-A 135 nt-3.51□□□□□ -2.97
RPB11P38902 YOL083C-AYOL083C-A 141 nt-3.52□□□□□ -2.97
RPB11P38902 YOR302WYOR302W 78 nt-3.53□□□□□ -2.97
RPB11P38902 snR52snR52 92 nt-3.53□□□□□ -2.97
RPB11P38902 YBR109W-AYBR109W-A 225 nt-3.57□□□□□ -2.98
RPB11P38902 GIM4YEL003W 336 nt-3.6□□□□□ -2.99
RPB11P38902 snR6snR6 112 nt-3.66□□□□□ -3
RPB11P38902 YBR296C-AYBR296C-A 120 nt-3.67□□□□□ -3
RPB11P38902 YNL198CYNL198C 303 nt-3.68□□□□□ -3
RPB11P38902 snR56snR56 88 nt-3.71□□□□□ -3
RPB11P38902 RPL41AYDL184C 78 nt-3.71□□□□□ -3
RPB11P38902 snR80snR80 171 nt-3.79□□□□□ -3.02
RPB11P38902 SOM1YEL059C-A 225 nt-3.82□□□□□ -3.02
RPB11P38902 YOR335W-AYOR335W-A 81 nt-3.82□□□□□ -3.02
RPB11P38902 YPL152W-AYPL152W-A 99 nt-3.82□□□□□ -3.02
RPB11P38902 YDR118W-AYDR118W-A 117 nt-3.83□□□□□ -3.02
RPB11P38902 snR73snR73 106 nt-3.84□□□□□ -3.02
RPB11P38902 RPL41BYDL133C-A 78 nt-3.86□□□□□ -3.03
RPB11P38902 snR38snR38 95 nt-3.89□□□□□ -3.03
RPB11P38902 Q0017Q0017 162 nt-3.94□□□□□ -3.04
RPB11P38902 snR65snR65 100 nt-3.98□□□□□ -3.05
RPB11P38902 YCR095W-AYCR095W-A 159 nt-4.03□□□□□ -3.05
RPB11P38902 YOL166W-AYOL166W-A 156 nt-4.11□□□□□ -3.07
RPB11P38902 YBL071C-BYBL071C-B 99 nt-4.16□□□□□ -3.08
RPB11P38902 YBL053WYBL053W 375 nt-4.17□□□□□ -3.08
RPB11P38902 YDR406W-AYDR406W-A 246 nt-4.18□□□□□ -3.08
RPB11P38902 VAR1Q0140 1197 nt-4.18□□□□□ -3.08
RPB11P38902 YGR151CYGR151C 336 nt-4.18□□□□□ -3.08
RPB11P38902 YDR524C-AYDR524C-A 120 nt-4.19□□□□□ -3.08
RPB11P38902 YOL164W-AYOL164W-A 183 nt-4.2□□□□□ -3.08
RPB11P38902 Q0142Q0142 177 nt-4.22□□□□□ -3.08
RPB11P38902 snR47snR47 99 nt-4.28□□□□□ -3.09
RPB11P38902 YDL114W-AYDL114W-A 114 nt-4.39□□□□□ -3.11
RPB11P38902 snR85snR85 171 nt-4.39□□□□□ -3.11
RPB11P38902 tV(UAC)QtV(UAC)Q 76 nt-4.41□□□□□ -3.12
RPB11P38902 YBL100W-CYBL100W-C 120 nt-4.41□□□□□ -3.12
RPB11P38902 YAL037C-AYAL037C-A 93 nt-4.45□□□□□ -3.12
RPB11P38902 YOR231C-AYOR231C-A 201 nt-4.53□□□□□ -3.13
RPB11P38902 YKL225WYKL225W 348 nt-4.59□□□□□ -3.14
RPB11P38902 SPG3YDR504C 384 nt-4.66□□□□□ -3.16
RPB11P38902 tS(GCU)Q1tS(GCU)Q1 86 nt-4.72□□□□□ -3.17
RPB11P38902 YCL001W-BYCL001W-B 255 nt-4.78□□□□□ -3.17
RPB11P38902 snR87snR87 109 nt-4.79□□□□□ -3.18
RPB11P38902 YHR175W-AYHR175W-A 150 nt-4.83□□□□□ -3.18
RPB11P38902 YJR162CYJR162C 351 nt-4.83□□□□□ -3.18
RPB11P38902 YNL337WYNL337W 255 nt-4.83□□□□□ -3.18
RPB11P38902 tR(ACG)Q2tR(ACG)Q2 74 nt-5.03□□□□□ -3.21
RPB11P38902 YGR122C-AYGR122C-A 129 nt-5.04□□□□□ -3.22
RPB11P38902 YKL096C-BYKL096C-B 150 nt-5.04□□□□□ -3.22
RPB11P38902 YMR046W-AYMR046W-A 129 nt-5.06□□□□□ -3.22
RPB11P38902 YDL159W-AYDL159W-A 132 nt-5.14□□□□□ -3.23
RPB11P38902 snR58snR58 96 nt-5.19□□□□□ -3.24
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms