Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 YER181CYER181C 324 nt-1□□□□□ -2.57
CUE1P38428 YFL019CYFL019C 354 nt-1.01□□□□□ -2.57
CUE1P38428 YOR381W-AYOR381W-A 168 nt-1.01□□□□□ -2.57
CUE1P38428 GIM4YEL003W 336 nt-1.02□□□□□ -2.57
CUE1P38428 YEL014CYEL014C 306 nt-1.02□□□□□ -2.57
CUE1P38428 YJL182CYJL182C 318 nt-1.03□□□□□ -2.57
CUE1P38428 YOR170WYOR170W 306 nt-1.03□□□□□ -2.57
CUE1P38428 YBR131C-AYBR131C-A 90 nt-1.06□□□□□ -2.58
CUE1P38428 snR49snR49 165 nt-1.06□□□□□ -2.58
CUE1P38428 YER090C-AYER090C-A 90 nt-1.07□□□□□ -2.58
CUE1P38428 tM(CAU)Q2tM(CAU)Q2 78 nt-1.07□□□□□ -2.58
CUE1P38428 YGR146C-AYGR146C-A 162 nt-1.09□□□□□ -2.58
CUE1P38428 YNL266WYNL266W 420 nt-1.11□□□□□ -2.59
CUE1P38428 RDS3YPR094W 324 nt-1.11□□□□□ -2.59
CUE1P38428 PMP2YEL017C-A 132 nt-1.13□□□□□ -2.59
CUE1P38428 snR55snR55 98 nt-1.14□□□□□ -2.59
CUE1P38428 YNL097C-BYNL097C-B 123 nt-1.14□□□□□ -2.59
CUE1P38428 snR50snR50 90 nt-1.14□□□□□ -2.59
CUE1P38428 snR39BsnR39B 96 nt-1.15□□□□□ -2.59
CUE1P38428 YOR329W-AYOR329W-A 210 nt-1.21□□□□□ -2.6
CUE1P38428 JLP2YMR132C 627 nt-1.26□□□□□ -2.61
CUE1P38428 YOL155W-AYOL155W-A 135 nt-1.28□□□□□ -2.61
CUE1P38428 snR65snR65 100 nt-1.3□□□□□ -2.62
CUE1P38428 tD(GUC)QtD(GUC)Q 75 nt-1.3□□□□□ -2.62
CUE1P38428 YOR302WYOR302W 78 nt-1.31□□□□□ -2.62
CUE1P38428 YPL152W-AYPL152W-A 99 nt-1.31□□□□□ -2.62
CUE1P38428 snR67snR67 82 nt-1.32□□□□□ -2.62
CUE1P38428 YLR286W-AYLR286W-A 135 nt-1.35□□□□□ -2.63
CUE1P38428 snR48snR48 113 nt-1.35□□□□□ -2.63
CUE1P38428 SKI7YOR076C 2244 nt-1.39□□□□□ -2.63
CUE1P38428 YNL205CYNL205C 423 nt-1.39□□□□□ -2.63
CUE1P38428 YBR178WYBR178W 375 nt-1.41□□□□□ -2.64
CUE1P38428 YHR175W-AYHR175W-A 150 nt-1.42□□□□□ -2.64
CUE1P38428 YDL159C-BYDL159C-B 177 nt-1.44□□□□□ -2.64
CUE1P38428 tL(UAA)QtL(UAA)Q 85 nt-1.47□□□□□ -2.64
CUE1P38428 YGL188C-AYGL188C-A 141 nt-1.5□□□□□ -2.65
CUE1P38428 tP(UGG)QtP(UGG)Q 72 nt-1.52□□□□□ -2.65
CUE1P38428 tR(ACG)Q2tR(ACG)Q2 74 nt-1.52□□□□□ -2.65
CUE1P38428 YOR102WYOR102W 351 nt-1.53□□□□□ -2.65
CUE1P38428 snR52snR52 92 nt-1.54□□□□□ -2.66
CUE1P38428 snR56snR56 88 nt-1.55□□□□□ -2.66
CUE1P38428 YLR342W-AYLR342W-A 174 nt-1.55□□□□□ -2.66
CUE1P38428 YOR231C-AYOR231C-A 201 nt-1.59□□□□□ -2.66
CUE1P38428 YML054C-AYML054C-A 159 nt-1.61□□□□□ -2.67
CUE1P38428 YHL015W-AYHL015W-A 84 nt-1.63□□□□□ -2.67
CUE1P38428 YLR299C-AYLR299C-A 93 nt-1.63□□□□□ -2.67
CUE1P38428 snR80snR80 171 nt-1.64□□□□□ -2.67
CUE1P38428 YBR196C-AYBR196C-A 150 nt-1.68□□□□□ -2.68
CUE1P38428 YDR524W-CYDR524W-C 90 nt-1.77□□□□□ -2.69
CUE1P38428 CDC65tQ(CUG)M 72 nt-1.78□□□□□ -2.69
CUE1P38428 tY(GUA)QtY(GUA)Q 84 nt-1.79□□□□□ -2.7
CUE1P38428 YGR240C-AYGR240C-A 201 nt-1.8□□□□□ -2.7
CUE1P38428 YNL198CYNL198C 303 nt-1.82□□□□□ -2.7
CUE1P38428 snR77snR77 88 nt-1.83□□□□□ -2.7
CUE1P38428 YDR406W-AYDR406W-A 246 nt-1.9□□□□□ -2.71
CUE1P38428 YOR376W-AYOR376W-A 156 nt-1.92□□□□□ -2.72
CUE1P38428 YHR180C-BYHR180C-B 105 nt-1.95□□□□□ -2.72
CUE1P38428 SOM1YEL059C-A 225 nt-1.99□□□□□ -2.73
CUE1P38428 YJL150WYJL150W 303 nt-1.99□□□□□ -2.73
CUE1P38428 YBL053WYBL053W 375 nt-2□□□□□ -2.73
CUE1P38428 YBR126W-BYBR126W-B 144 nt-2□□□□□ -2.73
CUE1P38428 YMR315W-AYMR315W-A 108 nt-2.04□□□□□ -2.74
CUE1P38428 snR81snR81 201 nt-2.07□□□□□ -2.74
CUE1P38428 YCR095W-AYCR095W-A 159 nt-2.08□□□□□ -2.74
CUE1P38428 YOR316C-AYOR316C-A 210 nt-2.12□□□□□ -2.75
CUE1P38428 YKL106C-AYKL106C-A 120 nt-2.15□□□□□ -2.75
CUE1P38428 YMR046W-AYMR046W-A 129 nt-2.23□□□□□ -2.77
CUE1P38428 YBR109W-AYBR109W-A 225 nt-2.23□□□□□ -2.77
CUE1P38428 YBR296C-AYBR296C-A 120 nt-2.26□□□□□ -2.77
CUE1P38428 YDR543CYDR543C 300 nt-2.27□□□□□ -2.77
CUE1P38428 RPL41AYDL184C 78 nt-2.3□□□□□ -2.78
CUE1P38428 YGR151CYGR151C 336 nt-2.34□□□□□ -2.78
CUE1P38428 YBL071C-BYBL071C-B 99 nt-2.37□□□□□ -2.79
CUE1P38428 YOL083C-AYOL083C-A 141 nt-2.37□□□□□ -2.79
CUE1P38428 snR38snR38 95 nt-2.37□□□□□ -2.79
CUE1P38428 SPG3YDR504C 384 nt-2.38□□□□□ -2.79
CUE1P38428 YOR309CYOR309C 381 nt-2.44□□□□□ -2.8
CUE1P38428 YOL164W-AYOL164W-A 183 nt-2.46□□□□□ -2.8
CUE1P38428 YOL166W-AYOL166W-A 156 nt-2.46□□□□□ -2.8
CUE1P38428 YAL037C-AYAL037C-A 93 nt-2.52□□□□□ -2.81
CUE1P38428 YCL001W-BYCL001W-B 255 nt-2.52□□□□□ -2.81
CUE1P38428 Q0142Q0142 177 nt-2.53□□□□□ -2.81
CUE1P38428 tM(CAU)Q1tM(CAU)Q1 76 nt-2.54□□□□□ -2.82
CUE1P38428 snR47snR47 99 nt-2.6□□□□□ -2.83
CUE1P38428 YLR466C-BYLR466C-B 117 nt-2.62□□□□□ -2.83
CUE1P38428 YBL100W-CYBL100W-C 120 nt-2.67□□□□□ -2.84
CUE1P38428 snR6snR6 112 nt-2.69□□□□□ -2.84
CUE1P38428 YNL338WYNL338W 159 nt-2.77□□□□□ -2.85
CUE1P38428 YNL337WYNL337W 255 nt-2.8□□□□□ -2.86
CUE1P38428 YOR335W-AYOR335W-A 81 nt-2.84□□□□□ -2.86
CUE1P38428 YKL225WYKL225W 348 nt-2.87□□□□□ -2.87
CUE1P38428 tS(GCU)Q1tS(GCU)Q1 86 nt-2.9□□□□□ -2.87
CUE1P38428 snR73snR73 106 nt-2.91□□□□□ -2.88
CUE1P38428 RPL41BYDL133C-A 78 nt-2.95□□□□□ -2.88
CUE1P38428 tV(UAC)QtV(UAC)Q 76 nt-2.97□□□□□ -2.88
CUE1P38428 YDL114W-AYDL114W-A 114 nt-2.99□□□□□ -2.89
CUE1P38428 YGL041C-BYGL041C-B 183 nt-3.13□□□□□ -2.91
CUE1P38428 snR85snR85 171 nt-3.15□□□□□ -2.91
CUE1P38428 Q0032Q0032 291 nt-3.19□□□□□ -2.92
CUE1P38428 YDR034C-AYDR034C-A 177 nt-3.21□□□□□ -2.92
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms