Protein–RNA interactions for Protein: P38225

FAT1, Very long-chain fatty acid transport protein, yeastyeast

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FAT1P38225 tT(AGU)I1tT(AGU)I1 73 nt0.6□□□□□ -2.31
FAT1P38225 tT(AGU)I2tT(AGU)I2 73 nt0.6□□□□□ -2.31
FAT1P38225 tT(AGU)JtT(AGU)J 73 nt0.6□□□□□ -2.31
FAT1P38225 tT(AGU)N1tT(AGU)N1 73 nt0.6□□□□□ -2.31
FAT1P38225 tT(AGU)N2tT(AGU)N2 73 nt0.6□□□□□ -2.31
FAT1P38225 tT(AGU)O1tT(AGU)O1 73 nt0.6□□□□□ -2.31
FAT1P38225 tT(AGU)O2tT(AGU)O2 73 nt0.6□□□□□ -2.31
FAT1P38225 YJL077W-AYJL077W-A 87 nt0.6□□□□□ -2.31
FAT1P38225 PMP2YEL017C-A 132 nt0.59□□□□□ -2.31
FAT1P38225 YIL071W-AYIL071W-A 477 nt0.59□□□□□ -2.31
FAT1P38225 YMR160WYMR160W 2451 nt0.58□□□□□ -2.32
FAT1P38225 UTP20YBL004W 7482 nt0.58□□□□□ -2.32
FAT1P38225 YNL266WYNL266W 420 nt0.58□□□□□ -2.32
FAT1P38225 ORC3YLL004W 1851 nt0.58□□□□□ -2.32
FAT1P38225 MLP2YIL149C 5040 nt0.57□□□□□ -2.32
FAT1P38225 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
FAT1P38225 YOR186C-AYOR186C-A 210 nt0.57□□□□□ -2.32
FAT1P38225 SEC10YLR166C 2616 nt0.54□□□□□ -2.32
FAT1P38225 snR69snR69 101 nt0.53□□□□□ -2.32
FAT1P38225 YBR196C-AYBR196C-A 150 nt0.5□□□□□ -2.33
FAT1P38225 EST1YLR233C 2100 nt0.49□□□□□ -2.33
FAT1P38225 YBL100W-BYBL100W-B 5313 nt0.49□□□□□ -2.33
FAT1P38225 YBR178WYBR178W 375 nt0.48□□□□□ -2.33
FAT1P38225 tD(GUC)QtD(GUC)Q 75 nt0.47□□□□□ -2.33
FAT1P38225 tF(GAA)BtF(GAA)B 73 nt0.47□□□□□ -2.33
FAT1P38225 tF(GAA)FtF(GAA)F 73 nt0.47□□□□□ -2.33
FAT1P38225 tF(GAA)GtF(GAA)G 73 nt0.47□□□□□ -2.33
FAT1P38225 tF(GAA)H1tF(GAA)H1 73 nt0.47□□□□□ -2.33
FAT1P38225 tF(GAA)H2tF(GAA)H2 73 nt0.47□□□□□ -2.33
FAT1P38225 tF(GAA)MtF(GAA)M 73 nt0.47□□□□□ -2.33
FAT1P38225 tF(GAA)P1tF(GAA)P1 73 nt0.47□□□□□ -2.33
FAT1P38225 tF(GAA)P2tF(GAA)P2 73 nt0.47□□□□□ -2.33
FAT1P38225 RDS3YPR094W 324 nt0.47□□□□□ -2.33
FAT1P38225 YPL060C-AYPL060C-A 3315 nt0.44□□□□□ -2.34
FAT1P38225 tQ(UUG)QtQ(UUG)Q 76 nt0.43□□□□□ -2.34
FAT1P38225 Q0143Q0143 153 nt0.42□□□□□ -2.34
FAT1P38225 YKL145W-AYKL145W-A 93 nt0.42□□□□□ -2.34
FAT1P38225 FMP27YLR454W 7887 nt0.39□□□□□ -2.35
FAT1P38225 YNL054W-BYNL054W-B 5250 nt0.39□□□□□ -2.35
FAT1P38225 snR61snR61 90 nt0.35□□□□□ -2.35
FAT1P38225 snR85snR85 171 nt0.35□□□□□ -2.35
FAT1P38225 YDL159C-BYDL159C-B 177 nt0.34□□□□□ -2.36
FAT1P38225 YLR286W-AYLR286W-A 135 nt0.34□□□□□ -2.36
FAT1P38225 AI1Q0050 2505 nt0.34□□□□□ -2.36
FAT1P38225 YOL014WYOL014W 375 nt0.33□□□□□ -2.36
FAT1P38225 YOL013W-AYOL013W-A 192 nt0.32□□□□□ -2.36
FAT1P38225 YNL103W-AYNL103W-A 90 nt0.31□□□□□ -2.36
FAT1P38225 YLR299C-AYLR299C-A 93 nt0.3□□□□□ -2.36
FAT1P38225 YER090C-AYER090C-A 90 nt0.27□□□□□ -2.37
FAT1P38225 YAL037C-AYAL037C-A 93 nt0.26□□□□□ -2.37
FAT1P38225 ESP1YGR098C 4893 nt0.25□□□□□ -2.37
FAT1P38225 YGL041C-BYGL041C-B 183 nt0.23□□□□□ -2.37
FAT1P38225 TFB5YDR079C-A 219 nt0.21□□□□□ -2.38
FAT1P38225 YOL083C-AYOL083C-A 141 nt0.2□□□□□ -2.38
FAT1P38225 SOV1YMR066W 2697 nt0.2□□□□□ -2.38
FAT1P38225 THO2YNL139C 4794 nt0.18□□□□□ -2.38
FAT1P38225 snR128snR128 126 nt0.18□□□□□ -2.38
FAT1P38225 snR50snR50 90 nt0.17□□□□□ -2.38
FAT1P38225 snR81snR81 201 nt0.16□□□□□ -2.38
FAT1P38225 YMR326CYMR326C 309 nt0.15□□□□□ -2.39
FAT1P38225 YBL100W-CYBL100W-C 120 nt0.14□□□□□ -2.39
FAT1P38225 YBL071C-BYBL071C-B 99 nt0.11□□□□□ -2.39
FAT1P38225 YER078W-AYER078W-A 165 nt0.1□□□□□ -2.39
FAT1P38225 snR67snR67 82 nt0.09□□□□□ -2.4
FAT1P38225 YHR180C-BYHR180C-B 105 nt0.08□□□□□ -2.4
FAT1P38225 YML100W-AYML100W-A 174 nt0.05□□□□□ -2.4
FAT1P38225 YOL164W-AYOL164W-A 183 nt0.05□□□□□ -2.4
FAT1P38225 YHR217CYHR217C 462 nt0.03□□□□□ -2.4
FAT1P38225 YML054C-AYML054C-A 159 nt0.03□□□□□ -2.4
FAT1P38225 YGR240C-AYGR240C-A 201 nt-0.04□□□□□ -2.42
FAT1P38225 YDR524C-AYDR524C-A 120 nt-0.05□□□□□ -2.42
FAT1P38225 snR45snR45 172 nt-0.05□□□□□ -2.42
FAT1P38225 YBL109WYBL109W 336 nt-0.07□□□□□ -2.42
FAT1P38225 snR47snR47 99 nt-0.09□□□□□ -2.42
FAT1P38225 RPL41AYDL184C 78 nt-0.11□□□□□ -2.43
FAT1P38225 snR62snR62 100 nt-0.12□□□□□ -2.43
FAT1P38225 tS(GCU)Q1tS(GCU)Q1 86 nt-0.12□□□□□ -2.43
FAT1P38225 PAU9YBL108C-A 129 nt-0.12□□□□□ -2.43
FAT1P38225 YBR296C-AYBR296C-A 120 nt-0.13□□□□□ -2.43
FAT1P38225 SBH2YER019C-A 267 nt-0.15□□□□□ -2.43
FAT1P38225 YBR109W-AYBR109W-A 225 nt-0.19□□□□□ -2.44
FAT1P38225 YDR034C-AYDR034C-A 177 nt-0.22□□□□□ -2.44
FAT1P38225 SKI7YOR076C 2244 nt-0.23□□□□□ -2.45
FAT1P38225 YDL247W-AYDL247W-A 75 nt-0.24□□□□□ -2.45
FAT1P38225 tA(UGC)QtA(UGC)Q 76 nt-0.24□□□□□ -2.45
FAT1P38225 snR38snR38 95 nt-0.37□□□□□ -2.47
FAT1P38225 YKL225WYKL225W 348 nt-0.38□□□□□ -2.47
FAT1P38225 YLL066W-BYLL066W-B 171 nt-0.38□□□□□ -2.47
FAT1P38225 YJL113WYJL113W 4647 nt-0.39□□□□□ -2.47
FAT1P38225 snR161snR161 161 nt-0.42□□□□□ -2.48
FAT1P38225 YKL106C-AYKL106C-A 120 nt-0.43□□□□□ -2.48
FAT1P38225 YOR376W-AYOR376W-A 156 nt-0.45□□□□□ -2.48
FAT1P38225 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
FAT1P38225 snR33snR33 183 nt-0.52□□□□□ -2.49
FAT1P38225 snR64snR64 101 nt-0.55□□□□□ -2.5
FAT1P38225 YHL009W-BYHL009W-B 5409 nt-0.55□□□□□ -2.5
FAT1P38225 snR77snR77 88 nt-0.61□□□□□ -2.51
FAT1P38225 YOR316C-AYOR316C-A 210 nt-0.61□□□□□ -2.51
FAT1P38225 tP(UGG)QtP(UGG)Q 72 nt-0.63□□□□□ -2.51
FAT1P38225 tT(UGU)G1tT(UGU)G1 72 nt-0.65□□□□□ -2.51
Retrieved 100 of 7,029 protein–RNA pairs in 40.2 ms