Protein–RNA interactions for Protein: P38199

HEK2, Heterogeneous nuclear rnp K-like protein 2, yeast

Known RBP RIP-Chip data

Length 381 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
HEK2	P38199	YNL067W-B	YNL067W-B	141 nt		-0.56	□□□□□ -2.5
HEK2	P38199	YIL071W-A	YIL071W-A	477 nt		-0.57	□□□□□ -2.5
HEK2	P38199	YNR077C	YNR077C	255 nt		-0.57	□□□□□ -2.5	RIP-Chip
HEK2	P38199	YNL097C-B	YNL097C-B	123 nt		-0.58	□□□□□ -2.5
HEK2	P38199	YPL152W-A	YPL152W-A	99 nt		-0.58	□□□□□ -2.5
HEK2	P38199	YDL007C-A	YDL007C-A	258 nt		-0.6	□□□□□ -2.51
HEK2	P38199	tM(CAU)Q2	tM(CAU)Q2	78 nt		-0.6	□□□□□ -2.51
HEK2	P38199	YGR146C-A	YGR146C-A	162 nt		-0.62	□□□□□ -2.51
HEK2	P38199	tQ(UUG)Q	tQ(UUG)Q	76 nt		-0.62	□□□□□ -2.51
HEK2	P38199	tT(UGU)G1	tT(UGU)G1	72 nt		-0.62	□□□□□ -2.51
HEK2	P38199	tT(UGU)G2	tT(UGU)G2	72 nt		-0.62	□□□□□ -2.51
HEK2	P38199	tT(UGU)P	tT(UGU)P	72 nt		-0.62	□□□□□ -2.51
HEK2	P38199	snR69	snR69	101 nt		-0.64	□□□□□ -2.51
HEK2	P38199	tA(UGC)Q	tA(UGC)Q	76 nt		-0.64	□□□□□ -2.51
HEK2	P38199	YHL009W-B	YHL009W-B	5409 nt		-0.65	□□□□□ -2.51
HEK2	P38199	YOR302W	YOR302W	78 nt		-0.66	□□□□□ -2.52	RIP-Chip
HEK2	P38199	YDR524W-C	YDR524W-C	90 nt		-0.67	□□□□□ -2.52
HEK2	P38199	snR161	snR161	161 nt		-0.67	□□□□□ -2.52
HEK2	P38199	snR39B	snR39B	96 nt		-0.67	□□□□□ -2.52
HEK2	P38199	YGL188C-A	YGL188C-A	141 nt		-0.69	□□□□□ -2.52
HEK2	P38199	snR33	snR33	183 nt		-0.69	□□□□□ -2.52
HEK2	P38199	PMP2	YEL017C-A	132 nt		-0.71	□□□□□ -2.52	RIP-Chip
HEK2	P38199	YER090C-A	YER090C-A	90 nt		-0.71	□□□□□ -2.52
HEK2	P38199	YOR329W-A	YOR329W-A	210 nt		-0.71	□□□□□ -2.52
HEK2	P38199	YOR231C-A	YOR231C-A	201 nt		-0.72	□□□□□ -2.52
HEK2	P38199	RDS3	YPR094W	324 nt		-0.72	□□□□□ -2.52
HEK2	P38199	PAU9	YBL108C-A	129 nt		-0.73	□□□□□ -2.53
HEK2	P38199	YBR223W-A	YBR223W-A	120 nt		-0.77	□□□□□ -2.53
HEK2	P38199	snR48	snR48	113 nt		-0.77	□□□□□ -2.53
HEK2	P38199	YNL266W	YNL266W	420 nt		-0.81	□□□□□ -2.54
HEK2	P38199	snR50	snR50	90 nt		-0.82	□□□□□ -2.54
HEK2	P38199	YLR342W-A	YLR342W-A	174 nt		-0.83	□□□□□ -2.54
HEK2	P38199	tD(GUC)Q	tD(GUC)Q	75 nt		-0.85	□□□□□ -2.55
HEK2	P38199	snR52	snR52	92 nt		-0.85	□□□□□ -2.55
HEK2	P38199	YNL205C	YNL205C	423 nt		-0.86	□□□□□ -2.55
HEK2	P38199	JLP2	YMR132C	627 nt		-0.87	□□□□□ -2.55
HEK2	P38199	snR80	snR80	171 nt		-0.88	□□□□□ -2.55
HEK2	P38199	YLR286W-A	YLR286W-A	135 nt		-0.91	□□□□□ -2.56
HEK2	P38199	tL(UAA)Q	tL(UAA)Q	85 nt		-0.92	□□□□□ -2.56
HEK2	P38199	YOR102W	YOR102W	351 nt		-0.94	□□□□□ -2.56
HEK2	P38199	snR67	snR67	82 nt		-0.96	□□□□□ -2.56
HEK2	P38199	YBR178W	YBR178W	375 nt		-0.98	□□□□□ -2.57
HEK2	P38199	YDL159C-B	YDL159C-B	177 nt		-0.99	□□□□□ -2.57
HEK2	P38199	tP(UGG)Q	tP(UGG)Q	72 nt		-1	□□□□□ -2.57
HEK2	P38199	YHL015W-A	YHL015W-A	84 nt		-1	□□□□□ -2.57
HEK2	P38199	YDR406W-A	YDR406W-A	246 nt		-1.07	□□□□□ -2.58
HEK2	P38199	SKI7	YOR076C	2244 nt		-1.08	□□□□□ -2.58	RIP-Chip
HEK2	P38199	YLR299C-A	YLR299C-A	93 nt		-1.13	□□□□□ -2.59
HEK2	P38199	Q0142	Q0142	177 nt		-1.15	□□□□□ -2.59
HEK2	P38199	YNL198C	YNL198C	303 nt		-1.15	□□□□□ -2.59	RIP-Chip
HEK2	P38199	YBR196C-A	YBR196C-A	150 nt		-1.15	□□□□□ -2.59
HEK2	P38199	YJL150W	YJL150W	303 nt		-1.22	□□□□□ -2.6	RIP-Chip
HEK2	P38199	YMR046W-A	YMR046W-A	129 nt		-1.24	□□□□□ -2.61
HEK2	P38199	YML054C-A	YML054C-A	159 nt		-1.26	□□□□□ -2.61
HEK2	P38199	SOM1	YEL059C-A	225 nt		-1.3	□□□□□ -2.62
HEK2	P38199	tY(GUA)Q	tY(GUA)Q	84 nt		-1.31	□□□□□ -2.62
HEK2	P38199	YCR095W-A	YCR095W-A	159 nt		-1.33	□□□□□ -2.62
HEK2	P38199	YBL053W	YBL053W	375 nt		-1.34	□□□□□ -2.62	RIP-Chip
HEK2	P38199	CDC65	tQ(CUG)M	72 nt		-1.35	□□□□□ -2.63
HEK2	P38199	snR77	snR77	88 nt		-1.39	□□□□□ -2.63
HEK2	P38199	SPG3	YDR504C	384 nt		-1.39	□□□□□ -2.63	RIP-Chip
HEK2	P38199	YHR180C-B	YHR180C-B	105 nt		-1.4	□□□□□ -2.63
HEK2	P38199	tM(CAU)Q1	tM(CAU)Q1	76 nt		-1.45	□□□□□ -2.64
HEK2	P38199	YGR240C-A	YGR240C-A	201 nt		-1.45	□□□□□ -2.64
HEK2	P38199	snR81	snR81	201 nt		-1.49	□□□□□ -2.65
HEK2	P38199	YMR315W-A	YMR315W-A	108 nt		-1.51	□□□□□ -2.65
HEK2	P38199	YOR376W-A	YOR376W-A	156 nt		-1.52	□□□□□ -2.65
HEK2	P38199	YOL166W-A	YOL166W-A	156 nt		-1.61	□□□□□ -2.67
HEK2	P38199	YLR466C-B	YLR466C-B	117 nt		-1.62	□□□□□ -2.67
HEK2	P38199	YGR151C	YGR151C	336 nt		-1.63	□□□□□ -2.67
HEK2	P38199	YOR316C-A	YOR316C-A	210 nt		-1.64	□□□□□ -2.67
HEK2	P38199	YKL106C-A	YKL106C-A	120 nt		-1.65	□□□□□ -2.67
HEK2	P38199	YBR296C-A	YBR296C-A	120 nt		-1.66	□□□□□ -2.68
HEK2	P38199	RPL41A	YDL184C	78 nt		-1.68	□□□□□ -2.68
HEK2	P38199	YBR109W-A	YBR109W-A	225 nt		-1.68	□□□□□ -2.68
HEK2	P38199	YOR309C	YOR309C	381 nt		-1.71	□□□□□ -2.68
HEK2	P38199	YCL001W-B	YCL001W-B	255 nt		-1.71	□□□□□ -2.68
HEK2	P38199	YOL083C-A	YOL083C-A	141 nt		-1.72	□□□□□ -2.68
HEK2	P38199	YBL071C-B	YBL071C-B	99 nt		-1.73	□□□□□ -2.69
HEK2	P38199	YDR543C	YDR543C	300 nt		-1.77	□□□□□ -2.69	RIP-Chip
HEK2	P38199	YOL164W-A	YOL164W-A	183 nt		-1.77	□□□□□ -2.69
HEK2	P38199	YNL338W	YNL338W	159 nt		-1.78	□□□□□ -2.69	RIP-Chip
HEK2	P38199	YBR126W-B	YBR126W-B	144 nt		-1.78	□□□□□ -2.69
HEK2	P38199	YAL037C-A	YAL037C-A	93 nt		-1.79	□□□□□ -2.7
HEK2	P38199	snR38	snR38	95 nt		-1.81	□□□□□ -2.7
HEK2	P38199	YBL100W-C	YBL100W-C	120 nt		-1.9	□□□□□ -2.71
HEK2	P38199	snR47	snR47	99 nt		-1.92	□□□□□ -2.72
HEK2	P38199	YNL337W	YNL337W	255 nt		-1.96	□□□□□ -2.72	RIP-Chip
HEK2	P38199	Q0032	Q0032	291 nt		-2	□□□□□ -2.73
HEK2	P38199	snR6	snR6	112 nt		-2.09	□□□□□ -2.74
HEK2	P38199	YGL007C-A	YGL007C-A	87 nt		-2.1	□□□□□ -2.75
HEK2	P38199	YKL225W	YKL225W	348 nt		-2.15	□□□□□ -2.75	RIP-Chip
HEK2	P38199	tS(GCU)Q1	tS(GCU)Q1	86 nt		-2.19	□□□□□ -2.76
HEK2	P38199	YOR335W-A	YOR335W-A	81 nt		-2.2	□□□□□ -2.76
HEK2	P38199	snR73	snR73	106 nt		-2.22	□□□□□ -2.76
HEK2	P38199	YGL041C-B	YGL041C-B	183 nt		-2.26	□□□□□ -2.77
HEK2	P38199	snR61	snR61	90 nt		-2.28	□□□□□ -2.77
HEK2	P38199	YNL103W-A	YNL103W-A	90 nt		-2.3	□□□□□ -2.78
HEK2	P38199	YDL114W-A	YDL114W-A	114 nt		-2.34	□□□□□ -2.78
HEK2	P38199	tV(UAC)Q	tV(UAC)Q	76 nt		-2.34	□□□□□ -2.78

Retrieved 100 of 7,029 protein–RNA pairs in 46.9 ms