Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFC1P35251 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RFC1P35251 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFC1P35251 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFC1P35251 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFC1P35251 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21■□□□□ 0.95
RFC1P35251 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21■□□□□ 0.95
RFC1P35251 AL031963.3-201ENST00000606441 850 ntBASIC21■□□□□ 0.95
RFC1P35251 AC092118.2-201ENST00000613495 667 ntBASIC21■□□□□ 0.95
RFC1P35251 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RFC1P35251 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21■□□□□ 0.95
RFC1P35251 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RFC1P35251 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RFC1P35251 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFC1P35251 LBX2-AS1-202ENST00000603175 2083 ntBASIC21■□□□□ 0.95
RFC1P35251 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RFC1P35251 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.99■□□□□ 0.95
RFC1P35251 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.99■□□□□ 0.95
RFC1P35251 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC1P35251 KRT8P20-201ENST00000423953 1409 ntBASIC20.99■□□□□ 0.95
RFC1P35251 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC1P35251 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC1P35251 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC1P35251 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.99■□□□□ 0.95
RFC1P35251 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.99■□□□□ 0.95
RFC1P35251 DUSP5P2-201ENST00000426873 1033 ntBASIC20.99■□□□□ 0.95
RFC1P35251 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.99■□□□□ 0.95
RFC1P35251 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFC1P35251 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFC1P35251 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFC1P35251 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.99■□□□□ 0.95
RFC1P35251 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFC1P35251 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC1P35251 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC1P35251 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
RFC1P35251 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RFC1P35251 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.98■□□□□ 0.95
RFC1P35251 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RFC1P35251 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.98■□□□□ 0.95
RFC1P35251 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.98■□□□□ 0.95
RFC1P35251 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.98■□□□□ 0.95
RFC1P35251 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.98■□□□□ 0.95
RFC1P35251 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.98■□□□□ 0.95
RFC1P35251 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.98■□□□□ 0.95
RFC1P35251 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFC1P35251 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.97■□□□□ 0.95
RFC1P35251 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.97■□□□□ 0.95
RFC1P35251 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.97■□□□□ 0.95
RFC1P35251 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.97■□□□□ 0.95
RFC1P35251 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.97■□□□□ 0.95
RFC1P35251 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.97■□□□□ 0.95
RFC1P35251 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 AC023632.3-201ENST00000521633 145 ntBASIC20.97■□□□□ 0.95
RFC1P35251 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.97■□□□□ 0.95
RFC1P35251 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.97■□□□□ 0.95
RFC1P35251 AL138781.1-201ENST00000566567 1274 ntBASIC20.97■□□□□ 0.95
RFC1P35251 AL109923.1-201ENST00000618799 583 ntBASIC20.97■□□□□ 0.95
RFC1P35251 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.97■□□□□ 0.95
RFC1P35251 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFC1P35251 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.96■□□□□ 0.95
RFC1P35251 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.96■□□□□ 0.95
RFC1P35251 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.96■□□□□ 0.95
RFC1P35251 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RFC1P35251 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.96■□□□□ 0.95
RFC1P35251 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RFC1P35251 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.96■□□□□ 0.95
RFC1P35251 AC091874.3-201ENST00000512672 1195 ntBASIC20.96■□□□□ 0.95
RFC1P35251 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.96■□□□□ 0.95
RFC1P35251 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms