Protein–RNA interactions for Protein: P35187

SGS1, ATP-dependent helicase SGS1, yeastyeast

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGS1P35187 snR45snR45 172 nt0.38□□□□□ -2.35
SGS1P35187 YOR186C-AYOR186C-A 210 nt0.38□□□□□ -2.35
SGS1P35187 YPL060C-AYPL060C-A 3315 nt0.37□□□□□ -2.35
SGS1P35187 tM(CAU)Q2tM(CAU)Q2 78 nt0.36□□□□□ -2.35
SGS1P35187 ESP1YGR098C 4893 nt0.34□□□□□ -2.35
SGS1P35187 YOR102WYOR102W 351 nt0.33□□□□□ -2.36
SGS1P35187 YDR210WYDR210W 228 nt0.32□□□□□ -2.36
SGS1P35187 YLR466C-BYLR466C-B 117 nt0.32□□□□□ -2.36
SGS1P35187 YOR329W-AYOR329W-A 210 nt0.31□□□□□ -2.36
SGS1P35187 YGR146C-AYGR146C-A 162 nt0.3□□□□□ -2.36
SGS1P35187 YHL015W-AYHL015W-A 84 nt0.3□□□□□ -2.36
SGS1P35187 snR39BsnR39B 96 nt0.3□□□□□ -2.36
SGS1P35187 YDL007C-AYDL007C-A 258 nt0.29□□□□□ -2.36
SGS1P35187 YBR099CYBR099C 384 nt0.29□□□□□ -2.36
SGS1P35187 Q0032Q0032 291 nt0.27□□□□□ -2.37
SGS1P35187 YGR151CYGR151C 336 nt0.26□□□□□ -2.37
SGS1P35187 YOL013W-AYOL013W-A 192 nt0.26□□□□□ -2.37
SGS1P35187 YNL198CYNL198C 303 nt0.24□□□□□ -2.37
SGS1P35187 tL(UAA)QtL(UAA)Q 85 nt0.23□□□□□ -2.37
SGS1P35187 YGL007C-AYGL007C-A 87 nt0.21□□□□□ -2.38
SGS1P35187 YNL067W-BYNL067W-B 141 nt0.21□□□□□ -2.38
SGS1P35187 MYO1YHR023W 5787 nt0.18□□□□□ -2.38
SGS1P35187 YJL077W-AYJL077W-A 87 nt0.18□□□□□ -2.38
SGS1P35187 EST1YLR233C 2100 nt0.17□□□□□ -2.38
SGS1P35187 SOV1YMR066W 2697 nt0.14□□□□□ -2.39
SGS1P35187 YNL205CYNL205C 423 nt0.13□□□□□ -2.39
SGS1P35187 YNL338WYNL338W 159 nt0.13□□□□□ -2.39
SGS1P35187 TFB5YDR079C-A 219 nt0.09□□□□□ -2.4
SGS1P35187 YBL053WYBL053W 375 nt0.09□□□□□ -2.4
SGS1P35187 PMP2YEL017C-A 132 nt0.08□□□□□ -2.4
SGS1P35187 snR69snR69 101 nt0.06□□□□□ -2.4
SGS1P35187 snR128snR128 126 nt0.04□□□□□ -2.4
SGS1P35187 YCR095W-AYCR095W-A 159 nt0.03□□□□□ -2.41
SGS1P35187 YGR164WYGR164W 336 nt0.03□□□□□ -2.41
SGS1P35187 YOR225WYOR225W 330 nt0.03□□□□□ -2.41
SGS1P35187 SEC10YLR166C 2616 nt0.01□□□□□ -2.41
SGS1P35187 tQ(UUG)QtQ(UUG)Q 76 nt0.01□□□□□ -2.41
SGS1P35187 RDS3YPR094W 324 nt0.01□□□□□ -2.41
SGS1P35187 tD(GUC)QtD(GUC)Q 75 nt-0.02□□□□□ -2.41
SGS1P35187 SOM1YEL059C-A 225 nt-0.03□□□□□ -2.41
SGS1P35187 YNR077CYNR077C 255 nt-0.04□□□□□ -2.42
SGS1P35187 URB1YKL014C 5295 nt-0.06□□□□□ -2.42
SGS1P35187 YER090C-AYER090C-A 90 nt-0.07□□□□□ -2.42
SGS1P35187 YNL266WYNL266W 420 nt-0.09□□□□□ -2.42
SGS1P35187 YLR294CYLR294C 330 nt-0.1□□□□□ -2.43
SGS1P35187 YLR286W-AYLR286W-A 135 nt-0.14□□□□□ -2.43
SGS1P35187 YML100W-AYML100W-A 174 nt-0.15□□□□□ -2.43
SGS1P35187 YBR178WYBR178W 375 nt-0.15□□□□□ -2.43
SGS1P35187 YDL159C-BYDL159C-B 177 nt-0.16□□□□□ -2.44
SGS1P35187 YBR196C-AYBR196C-A 150 nt-0.16□□□□□ -2.44
SGS1P35187 YCL001W-BYCL001W-B 255 nt-0.2□□□□□ -2.44
SGS1P35187 YIL071W-AYIL071W-A 477 nt-0.21□□□□□ -2.44
SGS1P35187 SBH2YER019C-A 267 nt-0.21□□□□□ -2.44
SGS1P35187 snR50snR50 90 nt-0.22□□□□□ -2.45
SGS1P35187 YLR299C-AYLR299C-A 93 nt-0.26□□□□□ -2.45
SGS1P35187 snR67snR67 82 nt-0.33□□□□□ -2.46
SGS1P35187 YNL170WYNL170W 396 nt-0.36□□□□□ -2.47
SGS1P35187 tA(UGC)QtA(UGC)Q 76 nt-0.38□□□□□ -2.47
SGS1P35187 PAU9YBL108C-A 129 nt-0.38□□□□□ -2.47
SGS1P35187 YHL009W-BYHL009W-B 5409 nt-0.41□□□□□ -2.48
SGS1P35187 ATP8Q0080 147 nt-0.44□□□□□ -2.48
SGS1P35187 YHR180C-BYHR180C-B 105 nt-0.49□□□□□ -2.49
SGS1P35187 YAL037C-AYAL037C-A 93 nt-0.5□□□□□ -2.49
SGS1P35187 YML054C-AYML054C-A 159 nt-0.53□□□□□ -2.49
SGS1P35187 SKI7YOR076C 2244 nt-0.54□□□□□ -2.5
SGS1P35187 YOL083C-AYOL083C-A 141 nt-0.55□□□□□ -2.5
SGS1P35187 YBL071C-BYBL071C-B 99 nt-0.56□□□□□ -2.5
SGS1P35187 tT(UGU)G1tT(UGU)G1 72 nt-0.57□□□□□ -2.5
SGS1P35187 tT(UGU)G2tT(UGU)G2 72 nt-0.57□□□□□ -2.5
SGS1P35187 tT(UGU)PtT(UGU)P 72 nt-0.57□□□□□ -2.5
SGS1P35187 YOL164W-AYOL164W-A 183 nt-0.61□□□□□ -2.51
SGS1P35187 snR81snR81 201 nt-0.62□□□□□ -2.51
SGS1P35187 Q0092Q0092 141 nt-0.62□□□□□ -2.51
SGS1P35187 snR61snR61 90 nt-0.64□□□□□ -2.51
SGS1P35187 snR161snR161 161 nt-0.64□□□□□ -2.51
SGS1P35187 YNL103W-AYNL103W-A 90 nt-0.66□□□□□ -2.52
SGS1P35187 YBR223W-AYBR223W-A 120 nt-0.67□□□□□ -2.52
SGS1P35187 YBL100W-CYBL100W-C 120 nt-0.68□□□□□ -2.52
SGS1P35187 RPL41AYDL184C 78 nt-0.71□□□□□ -2.52
SGS1P35187 YBR296C-AYBR296C-A 120 nt-0.72□□□□□ -2.52
SGS1P35187 YBR109W-AYBR109W-A 225 nt-0.73□□□□□ -2.53
SGS1P35187 YGL041C-BYGL041C-B 183 nt-0.74□□□□□ -2.53
SGS1P35187 YGR240C-AYGR240C-A 201 nt-0.76□□□□□ -2.53
SGS1P35187 snR33snR33 183 nt-0.78□□□□□ -2.53
SGS1P35187 snR47snR47 99 nt-0.78□□□□□ -2.53
SGS1P35187 Q0143Q0143 153 nt-0.84□□□□□ -2.54
SGS1P35187 snR38snR38 95 nt-0.87□□□□□ -2.55
SGS1P35187 YKL106C-AYKL106C-A 120 nt-0.91□□□□□ -2.56
SGS1P35187 YOR376W-AYOR376W-A 156 nt-0.91□□□□□ -2.56
SGS1P35187 snR62snR62 100 nt-0.98□□□□□ -2.57
SGS1P35187 YMR326CYMR326C 309 nt-0.99□□□□□ -2.57
SGS1P35187 YOR316C-AYOR316C-A 210 nt-0.99□□□□□ -2.57
SGS1P35187 tS(GCU)Q1tS(GCU)Q1 86 nt-1□□□□□ -2.57
SGS1P35187 YDR034C-AYDR034C-A 177 nt-1.03□□□□□ -2.57
SGS1P35187 YKL225WYKL225W 348 nt-1.03□□□□□ -2.57
SGS1P35187 snR85snR85 171 nt-1.11□□□□□ -2.59
SGS1P35187 YHR217CYHR217C 462 nt-1.11□□□□□ -2.59
SGS1P35187 tP(UGG)QtP(UGG)Q 72 nt-1.16□□□□□ -2.6
SGS1P35187 snR77snR77 88 nt-1.21□□□□□ -2.6
SGS1P35187 CDC65tQ(CUG)M 72 nt-1.22□□□□□ -2.6
Retrieved 100 of 7,029 protein–RNA pairs in 53.5 ms