Protein–RNA interactions for Protein: P34241

URB1, Nucleolar pre-ribosomal-associated protein 1, yeastyeast

Known RBP Predictions only

Length 1,764 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
URB1P34241 YOR381W-AYOR381W-A 168 nt-1.8□□□□□ -2.7
URB1P34241 YEL014CYEL014C 306 nt-1.8□□□□□ -2.7
URB1P34241 YGL041CYGL041C 204 nt-1.82□□□□□ -2.7
URB1P34241 YOR008C-AYOR008C-A 225 nt-1.82□□□□□ -2.7
URB1P34241 YAL068W-AYAL068W-A 255 nt-1.82□□□□□ -2.7
URB1P34241 YGR035CYGR035C 351 nt-1.84□□□□□ -2.7
URB1P34241 YDR183C-AYDR183C-A 258 nt-1.85□□□□□ -2.7
URB1P34241 YOR293C-AYOR293C-A 150 nt-1.85□□□□□ -2.7
URB1P34241 YDL159C-BYDL159C-B 177 nt-1.85□□□□□ -2.71
URB1P34241 YLR286W-AYLR286W-A 135 nt-1.87□□□□□ -2.71
URB1P34241 YOR329W-AYOR329W-A 210 nt-1.87□□□□□ -2.71
URB1P34241 snR78snR78 87 nt-1.89□□□□□ -2.71
URB1P34241 YJR157WYJR157W 363 nt-1.92□□□□□ -2.72
URB1P34241 ATP19YOL077W-A 207 nt-1.92□□□□□ -2.72
URB1P34241 YDR413CYDR413C 576 nt-1.95□□□□□ -2.72
URB1P34241 YEL050W-AYEL050W-A 192 nt-1.96□□□□□ -2.72
URB1P34241 YER181CYER181C 324 nt-1.96□□□□□ -2.72
URB1P34241 YBR178WYBR178W 375 nt-1.96□□□□□ -2.72
URB1P34241 YPR197CYPR197C 564 nt-1.98□□□□□ -2.73
URB1P34241 YLR342W-AYLR342W-A 174 nt-2.01□□□□□ -2.73
URB1P34241 YBR131C-AYBR131C-A 90 nt-2.03□□□□□ -2.73
URB1P34241 tF(GAA)QtF(GAA)Q 75 nt-2.04□□□□□ -2.74
URB1P34241 YOR376W-AYOR376W-A 156 nt-2.04□□□□□ -2.74
URB1P34241 YHR180C-BYHR180C-B 105 nt-2.05□□□□□ -2.74
URB1P34241 YLR299C-AYLR299C-A 93 nt-2.05□□□□□ -2.74
URB1P34241 YMR315W-AYMR315W-A 108 nt-2.07□□□□□ -2.74
URB1P34241 YBR126W-BYBR126W-B 144 nt-2.08□□□□□ -2.74
URB1P34241 YKL118WYKL118W 312 nt-2.1□□□□□ -2.75
URB1P34241 snR55snR55 98 nt-2.11□□□□□ -2.75
URB1P34241 YOR102WYOR102W 351 nt-2.11□□□□□ -2.75
URB1P34241 YOR316C-AYOR316C-A 210 nt-2.13□□□□□ -2.75
URB1P34241 YPL038W-AYPL038W-A 192 nt-2.19□□□□□ -2.76
URB1P34241 RPL39YJL189W 156 nt-2.2□□□□□ -2.76
URB1P34241 YOR309CYOR309C 381 nt-2.2□□□□□ -2.76
URB1P34241 YLR222C-AYLR222C-A 231 nt-2.22□□□□□ -2.76
URB1P34241 YDR157WYDR157W 402 nt-2.23□□□□□ -2.77
URB1P34241 snR48snR48 113 nt-2.28□□□□□ -2.78
URB1P34241 YNL097C-BYNL097C-B 123 nt-2.3□□□□□ -2.78
URB1P34241 YDL240C-AYDL240C-A 138 nt-2.31□□□□□ -2.78
URB1P34241 YGL188C-AYGL188C-A 141 nt-2.32□□□□□ -2.78
URB1P34241 YOL166W-AYOL166W-A 156 nt-2.33□□□□□ -2.78
URB1P34241 YNL198CYNL198C 303 nt-2.37□□□□□ -2.79
URB1P34241 YOR302WYOR302W 78 nt-2.38□□□□□ -2.79
URB1P34241 tL(UAA)QtL(UAA)Q 85 nt-2.38□□□□□ -2.79
URB1P34241 YNL277W-AYNL277W-A 189 nt-2.39□□□□□ -2.79
URB1P34241 RPL41AYDL184C 78 nt-2.41□□□□□ -2.8
URB1P34241 YDR543CYDR543C 300 nt-2.41□□□□□ -2.8
URB1P34241 YJL150WYJL150W 303 nt-2.42□□□□□ -2.8
URB1P34241 YKL106C-AYKL106C-A 120 nt-2.44□□□□□ -2.8
URB1P34241 Q0017Q0017 162 nt-2.44□□□□□ -2.8
URB1P34241 GIM4YEL003W 336 nt-2.47□□□□□ -2.8
URB1P34241 YPR012WYPR012W 255 nt-2.47□□□□□ -2.8
URB1P34241 YOL155W-AYOL155W-A 135 nt-2.49□□□□□ -2.81
URB1P34241 snR52snR52 92 nt-2.49□□□□□ -2.81
URB1P34241 YDR524W-CYDR524W-C 90 nt-2.5□□□□□ -2.81
URB1P34241 snR56snR56 88 nt-2.54□□□□□ -2.82
URB1P34241 YOL083C-AYOL083C-A 141 nt-2.54□□□□□ -2.82
URB1P34241 snR80snR80 171 nt-2.56□□□□□ -2.82
URB1P34241 YHL015W-AYHL015W-A 84 nt-2.56□□□□□ -2.82
URB1P34241 YBR296C-AYBR296C-A 120 nt-2.57□□□□□ -2.82
URB1P34241 YDR118W-AYDR118W-A 117 nt-2.61□□□□□ -2.83
URB1P34241 snR38snR38 95 nt-2.62□□□□□ -2.83
URB1P34241 Q0142Q0142 177 nt-2.63□□□□□ -2.83
URB1P34241 YBR109W-AYBR109W-A 225 nt-2.63□□□□□ -2.83
URB1P34241 YCR095W-AYCR095W-A 159 nt-2.65□□□□□ -2.83
URB1P34241 SOM1YEL059C-A 225 nt-2.65□□□□□ -2.83
URB1P34241 snR6snR6 112 nt-2.69□□□□□ -2.84
URB1P34241 snR65snR65 100 nt-2.74□□□□□ -2.85
URB1P34241 YPL152W-AYPL152W-A 99 nt-2.77□□□□□ -2.85
URB1P34241 VAR1Q0140 1197 nt-2.79□□□□□ -2.86
URB1P34241 YGR151CYGR151C 336 nt-2.82□□□□□ -2.86
URB1P34241 RPL41BYDL133C-A 78 nt-2.82□□□□□ -2.86
URB1P34241 YDR406W-AYDR406W-A 246 nt-2.83□□□□□ -2.86
URB1P34241 YOR335W-AYOR335W-A 81 nt-2.85□□□□□ -2.87
URB1P34241 YBL071C-BYBL071C-B 99 nt-2.86□□□□□ -2.87
URB1P34241 snR47snR47 99 nt-2.87□□□□□ -2.87
URB1P34241 snR73snR73 106 nt-2.89□□□□□ -2.87
URB1P34241 YOL164W-AYOL164W-A 183 nt-2.89□□□□□ -2.87
URB1P34241 YDR524C-AYDR524C-A 120 nt-2.98□□□□□ -2.89
URB1P34241 YBL053WYBL053W 375 nt-2.98□□□□□ -2.89
URB1P34241 tV(UAC)QtV(UAC)Q 76 nt-3□□□□□ -2.89
URB1P34241 YDL114W-AYDL114W-A 114 nt-3.01□□□□□ -2.89
URB1P34241 snR85snR85 171 nt-3.07□□□□□ -2.9
URB1P34241 YAL037C-AYAL037C-A 93 nt-3.08□□□□□ -2.9
URB1P34241 YBL100W-CYBL100W-C 120 nt-3.16□□□□□ -2.92
URB1P34241 YKL225WYKL225W 348 nt-3.17□□□□□ -2.92
URB1P34241 tS(GCU)Q1tS(GCU)Q1 86 nt-3.22□□□□□ -2.92
URB1P34241 YOR231C-AYOR231C-A 201 nt-3.22□□□□□ -2.92
URB1P34241 YHR175W-AYHR175W-A 150 nt-3.34□□□□□ -2.94
URB1P34241 YJR162CYJR162C 351 nt-3.34□□□□□ -2.94
URB1P34241 YNL337WYNL337W 255 nt-3.34□□□□□ -2.94
URB1P34241 YMR046W-AYMR046W-A 129 nt-3.35□□□□□ -2.95
URB1P34241 SPG3YDR504C 384 nt-3.38□□□□□ -2.95
URB1P34241 snR87snR87 109 nt-3.45□□□□□ -2.96
URB1P34241 snR58snR58 96 nt-3.46□□□□□ -2.96
URB1P34241 YGR122C-AYGR122C-A 129 nt-3.46□□□□□ -2.96
URB1P34241 YDL159W-AYDL159W-A 132 nt-3.48□□□□□ -2.97
URB1P34241 YCL001W-BYCL001W-B 255 nt-3.53□□□□□ -2.97
URB1P34241 tR(ACG)Q2tR(ACG)Q2 74 nt-3.6□□□□□ -2.99
URB1P34241 YDR034C-AYDR034C-A 177 nt-3.62□□□□□ -2.99
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms