Protein–RNA interactions for Protein: P32837

UGA4, GABA-specific permease, yeastyeast

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UGA4P32837 MYO1YHR023W 5787 nt1.16□□□□□ -2.22
UGA4P32837 YNL284C-BYNL284C-B 5268 nt1.16□□□□□ -2.22
UGA4P32837 NST1YNL091W 3723 nt1.16□□□□□ -2.22
UGA4P32837 EST1YLR233C 2100 nt1.16□□□□□ -2.22
UGA4P32837 YOL164W-AYOL164W-A 183 nt1.15□□□□□ -2.23
UGA4P32837 RDS3YPR094W 324 nt1.15□□□□□ -2.23
UGA4P32837 NIP1YMR309C 2439 nt1.14□□□□□ -2.23
UGA4P32837 BEM2YER155C 6504 nt1.12□□□□□ -2.23
UGA4P32837 BUL2YML111W 2763 nt1.12□□□□□ -2.23
UGA4P32837 YLR299C-AYLR299C-A 93 nt1.12□□□□□ -2.23
UGA4P32837 YGR240C-AYGR240C-A 201 nt1.11□□□□□ -2.23
UGA4P32837 YDL159C-BYDL159C-B 177 nt1.1□□□□□ -2.23
UGA4P32837 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
UGA4P32837 YDR034C-AYDR034C-A 177 nt1.07□□□□□ -2.24
UGA4P32837 MLP1YKR095W 5628 nt1.07□□□□□ -2.24
UGA4P32837 YPL060C-AYPL060C-A 3315 nt1.07□□□□□ -2.24
UGA4P32837 PET111YMR257C 2403 nt1.05□□□□□ -2.24
UGA4P32837 MLP2YIL149C 5040 nt1.05□□□□□ -2.24
UGA4P32837 YJR029WYJR029W 5268 nt1.03□□□□□ -2.24
UGA4P32837 YPR137C-BYPR137C-B 5268 nt1.01□□□□□ -2.25
UGA4P32837 PAU12YGR294W 363 nt1.01□□□□□ -2.25
UGA4P32837 tQ(UUG)QtQ(UUG)Q 76 nt1.01□□□□□ -2.25
UGA4P32837 RKR1YMR247C 4689 nt1□□□□□ -2.25
UGA4P32837 VAM6YDL077C 3150 nt1□□□□□ -2.25
UGA4P32837 PAU24YBR301W 363 nt0.99□□□□□ -2.25
UGA4P32837 snR47snR47 99 nt0.98□□□□□ -2.25
UGA4P32837 IQG1YPL242C 4488 nt0.97□□□□□ -2.25
UGA4P32837 DOP1YDR141C 5097 nt0.96□□□□□ -2.25
UGA4P32837 YDR371C-AYDR371C-A 105 nt0.96□□□□□ -2.26
UGA4P32837 UTP20YBL004W 7482 nt0.95□□□□□ -2.26
UGA4P32837 YOR192C-BYOR192C-B 5313 nt0.95□□□□□ -2.26
UGA4P32837 YHR180C-BYHR180C-B 105 nt0.92□□□□□ -2.26
UGA4P32837 YNL054W-BYNL054W-B 5250 nt0.9□□□□□ -2.27
UGA4P32837 tF(GAA)BtF(GAA)B 73 nt0.89□□□□□ -2.27
UGA4P32837 tF(GAA)FtF(GAA)F 73 nt0.89□□□□□ -2.27
UGA4P32837 tF(GAA)GtF(GAA)G 73 nt0.89□□□□□ -2.27
UGA4P32837 tF(GAA)H1tF(GAA)H1 73 nt0.89□□□□□ -2.27
UGA4P32837 tF(GAA)H2tF(GAA)H2 73 nt0.89□□□□□ -2.27
UGA4P32837 tF(GAA)MtF(GAA)M 73 nt0.89□□□□□ -2.27
UGA4P32837 tF(GAA)P1tF(GAA)P1 73 nt0.89□□□□□ -2.27
UGA4P32837 tF(GAA)P2tF(GAA)P2 73 nt0.89□□□□□ -2.27
UGA4P32837 EMT1tM(CAU)D 73 nt0.88□□□□□ -2.27
UGA4P32837 EMT5tM(CAU)J1 73 nt0.88□□□□□ -2.27
UGA4P32837 EMT3tM(CAU)J2 73 nt0.88□□□□□ -2.27
UGA4P32837 EMT4tM(CAU)M 73 nt0.88□□□□□ -2.27
UGA4P32837 EMT2tM(CAU)O2 73 nt0.88□□□□□ -2.27
UGA4P32837 YMR160WYMR160W 2451 nt0.87□□□□□ -2.27
UGA4P32837 YER090C-AYER090C-A 90 nt0.86□□□□□ -2.27
UGA4P32837 tT(AGU)BtT(AGU)B 73 nt0.84□□□□□ -2.27
UGA4P32837 tT(AGU)CtT(AGU)C 73 nt0.84□□□□□ -2.27
UGA4P32837 tT(AGU)DtT(AGU)D 73 nt0.84□□□□□ -2.27
UGA4P32837 tT(AGU)HtT(AGU)H 73 nt0.84□□□□□ -2.27
UGA4P32837 tT(AGU)I1tT(AGU)I1 73 nt0.84□□□□□ -2.27
UGA4P32837 tT(AGU)I2tT(AGU)I2 73 nt0.84□□□□□ -2.27
UGA4P32837 tT(AGU)JtT(AGU)J 73 nt0.84□□□□□ -2.27
UGA4P32837 tT(AGU)N1tT(AGU)N1 73 nt0.84□□□□□ -2.27
UGA4P32837 tT(AGU)N2tT(AGU)N2 73 nt0.84□□□□□ -2.27
UGA4P32837 tT(AGU)O1tT(AGU)O1 73 nt0.84□□□□□ -2.27
UGA4P32837 tT(AGU)O2tT(AGU)O2 73 nt0.84□□□□□ -2.27
UGA4P32837 YML054C-AYML054C-A 159 nt0.83□□□□□ -2.28
UGA4P32837 ORC3YLL004W 1851 nt0.82□□□□□ -2.28
UGA4P32837 AI1Q0050 2505 nt0.81□□□□□ -2.28
UGA4P32837 RPL41AYDL184C 78 nt0.81□□□□□ -2.28
UGA4P32837 YPR159C-AYPR159C-A 102 nt0.81□□□□□ -2.28
UGA4P32837 YOR186C-AYOR186C-A 210 nt0.8□□□□□ -2.28
UGA4P32837 YBR296C-AYBR296C-A 120 nt0.78□□□□□ -2.28
UGA4P32837 YBL100W-BYBL100W-B 5313 nt0.76□□□□□ -2.29
UGA4P32837 snR64snR64 101 nt0.73□□□□□ -2.29
UGA4P32837 YBR109W-AYBR109W-A 225 nt0.73□□□□□ -2.29
UGA4P32837 snR50snR50 90 nt0.73□□□□□ -2.29
UGA4P32837 YKL225WYKL225W 348 nt0.72□□□□□ -2.29
UGA4P32837 YOL014WYOL014W 375 nt0.7□□□□□ -2.3
UGA4P32837 snR53snR53 91 nt0.7□□□□□ -2.3
UGA4P32837 FMP27YLR454W 7887 nt0.7□□□□□ -2.3
UGA4P32837 snR67snR67 82 nt0.69□□□□□ -2.3
UGA4P32837 YKL145W-AYKL145W-A 93 nt0.66□□□□□ -2.3
UGA4P32837 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
UGA4P32837 UTP10YJL109C 5310 nt0.56□□□□□ -2.32
UGA4P32837 snR38snR38 95 nt0.55□□□□□ -2.32
UGA4P32837 SKI7YOR076C 2244 nt0.49□□□□□ -2.33
UGA4P32837 ESP1YGR098C 4893 nt0.46□□□□□ -2.34
UGA4P32837 YML100W-AYML100W-A 174 nt0.43□□□□□ -2.34
UGA4P32837 THO2YNL139C 4794 nt0.41□□□□□ -2.34
UGA4P32837 YOL013W-AYOL013W-A 192 nt0.38□□□□□ -2.35
UGA4P32837 snR128snR128 126 nt0.37□□□□□ -2.35
UGA4P32837 SOV1YMR066W 2697 nt0.37□□□□□ -2.35
UGA4P32837 YDL159W-AYDL159W-A 132 nt0.33□□□□□ -2.36
UGA4P32837 YER078W-AYER078W-A 165 nt0.29□□□□□ -2.36
UGA4P32837 YGR122C-AYGR122C-A 129 nt0.29□□□□□ -2.36
UGA4P32837 YKL106C-AYKL106C-A 120 nt0.29□□□□□ -2.36
UGA4P32837 PAU9YBL108C-A 129 nt0.18□□□□□ -2.38
UGA4P32837 YLR149C-AYLR149C-A 87 nt0.17□□□□□ -2.38
UGA4P32837 YKL096C-BYKL096C-B 150 nt0.09□□□□□ -2.4
UGA4P32837 YOR376W-AYOR376W-A 156 nt0.08□□□□□ -2.4
UGA4P32837 YJL113WYJL113W 4647 nt0.07□□□□□ -2.4
UGA4P32837 YDL114W-AYDL114W-A 114 nt0.03□□□□□ -2.4
UGA4P32837 YOR316C-AYOR316C-A 210 nt0.03□□□□□ -2.4
UGA4P32837 tA(UGC)QtA(UGC)Q 76 nt0.01□□□□□ -2.41
UGA4P32837 SBH2YER019C-A 267 nt-0.04□□□□□ -2.42
UGA4P32837 tV(UAC)QtV(UAC)Q 76 nt-0.04□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 1859.8 ms