Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC104771.1-201ENST00000603335 964 ntBASIC21.01■□□□□ 0.95
MMP8P22894 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP8P22894 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MMP8P22894 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP8P22894 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
MMP8P22894 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
MMP8P22894 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MMP8P22894 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
MMP8P22894 AC073210.2-201ENST00000430369 194 ntBASIC21■□□□□ 0.95
MMP8P22894 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
MMP8P22894 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21■□□□□ 0.95
MMP8P22894 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP8P22894 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21■□□□□ 0.95
MMP8P22894 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP8P22894 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP8P22894 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.99■□□□□ 0.95
MMP8P22894 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP8P22894 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
MMP8P22894 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP8P22894 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP8P22894 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP8P22894 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP8P22894 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP8P22894 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.99■□□□□ 0.95
MMP8P22894 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.99■□□□□ 0.95
MMP8P22894 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP8P22894 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.99■□□□□ 0.95
MMP8P22894 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
MMP8P22894 AC142086.2-201ENST00000569753 217 ntBASIC20.99■□□□□ 0.95
MMP8P22894 AC005829.2-201ENST00000571422 1056 ntBASIC20.99■□□□□ 0.95
MMP8P22894 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.99■□□□□ 0.95
MMP8P22894 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MMP8P22894 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.99■□□□□ 0.95
MMP8P22894 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP8P22894 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP8P22894 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
MMP8P22894 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP8P22894 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MMP8P22894 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
MMP8P22894 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.99■□□□□ 0.95
MMP8P22894 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.99■□□□□ 0.95
MMP8P22894 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.99■□□□□ 0.95
MMP8P22894 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP8P22894 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP8P22894 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
MMP8P22894 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP8P22894 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.98■□□□□ 0.95
MMP8P22894 PHGDH-210ENST00000641115 1638 ntBASIC20.98■□□□□ 0.95
MMP8P22894 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP8P22894 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP8P22894 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MMP8P22894 AC097658.1-201ENST00000475555 843 ntBASIC20.98■□□□□ 0.95
MMP8P22894 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.98■□□□□ 0.95
MMP8P22894 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
MMP8P22894 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
MMP8P22894 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP8P22894 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP8P22894 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP8P22894 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP8P22894 AP001271.2-201ENST00000624018 1556 ntBASIC20.97■□□□□ 0.95
MMP8P22894 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP8P22894 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP8P22894 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MMP8P22894 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP8P22894 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP8P22894 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP8P22894 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
MMP8P22894 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.97■□□□□ 0.95
MMP8P22894 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
MMP8P22894 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP8P22894 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP8P22894 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.97■□□□□ 0.95
MMP8P22894 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP8P22894 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP8P22894 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
MMP8P22894 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP8P22894 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP8P22894 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.96■□□□□ 0.95
MMP8P22894 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.96■□□□□ 0.95
MMP8P22894 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 AC083880.1-201ENST00000608266 535 ntBASIC20.96■□□□□ 0.95
MMP8P22894 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP8P22894 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP8P22894 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP8P22894 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP8P22894 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MMP8P22894 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP8P22894 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP8P22894 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP8P22894 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms