Protein–RNA interactions for Protein: P22141

PRE1, Proteasome subunit beta type-4, yeastyeast

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRE1P22141 YOR008C-AYOR008C-A 225 nt-1.08□□□□□ -2.58
PRE1P22141 YPL038W-AYPL038W-A 192 nt-1.09□□□□□ -2.58
PRE1P22141 snR39BsnR39B 96 nt-1.09□□□□□ -2.58
PRE1P22141 YGR146C-AYGR146C-A 162 nt-1.1□□□□□ -2.59
PRE1P22141 tM(CAU)Q2tM(CAU)Q2 78 nt-1.11□□□□□ -2.59
PRE1P22141 YNL277W-AYNL277W-A 189 nt-1.12□□□□□ -2.59
PRE1P22141 tP(UGG)QtP(UGG)Q 72 nt-1.13□□□□□ -2.59
PRE1P22141 SKI7YOR076C 2244 nt-1.13□□□□□ -2.59
PRE1P22141 YDR413CYDR413C 576 nt-1.14□□□□□ -2.59
PRE1P22141 YNL097C-BYNL097C-B 123 nt-1.14□□□□□ -2.59
PRE1P22141 snR161snR161 161 nt-1.14□□□□□ -2.59
PRE1P22141 YER181CYER181C 324 nt-1.15□□□□□ -2.59
PRE1P22141 YOR329W-AYOR329W-A 210 nt-1.16□□□□□ -2.6
PRE1P22141 YDL240C-AYDL240C-A 138 nt-1.18□□□□□ -2.6
PRE1P22141 RPL39YJL189W 156 nt-1.18□□□□□ -2.6
PRE1P22141 snR67snR67 82 nt-1.2□□□□□ -2.6
PRE1P22141 VAR1Q0140 1197 nt-1.2□□□□□ -2.6
PRE1P22141 tD(GUC)QtD(GUC)Q 75 nt-1.21□□□□□ -2.6
PRE1P22141 YKL118WYKL118W 312 nt-1.22□□□□□ -2.6
PRE1P22141 YLR286W-AYLR286W-A 135 nt-1.23□□□□□ -2.61
PRE1P22141 YBR178WYBR178W 375 nt-1.25□□□□□ -2.61
PRE1P22141 YBR223W-AYBR223W-A 120 nt-1.25□□□□□ -2.61
PRE1P22141 snR55snR55 98 nt-1.28□□□□□ -2.61
PRE1P22141 YPR012WYPR012W 255 nt-1.29□□□□□ -2.62
PRE1P22141 YOR302WYOR302W 78 nt-1.3□□□□□ -2.62
PRE1P22141 YDL159C-BYDL159C-B 177 nt-1.31□□□□□ -2.62
PRE1P22141 GIM4YEL003W 336 nt-1.32□□□□□ -2.62
PRE1P22141 YML054C-AYML054C-A 159 nt-1.35□□□□□ -2.63
PRE1P22141 YNL205CYNL205C 423 nt-1.35□□□□□ -2.63
PRE1P22141 snR48snR48 113 nt-1.35□□□□□ -2.63
PRE1P22141 tL(UAA)QtL(UAA)Q 85 nt-1.36□□□□□ -2.63
PRE1P22141 CDC65tQ(CUG)M 72 nt-1.39□□□□□ -2.63
PRE1P22141 snR77snR77 88 nt-1.4□□□□□ -2.63
PRE1P22141 YOL155W-AYOL155W-A 135 nt-1.4□□□□□ -2.63
PRE1P22141 YPL152W-AYPL152W-A 99 nt-1.42□□□□□ -2.64
PRE1P22141 YGL188C-AYGL188C-A 141 nt-1.47□□□□□ -2.64
PRE1P22141 YLR299C-AYLR299C-A 93 nt-1.48□□□□□ -2.65
PRE1P22141 YGR240C-AYGR240C-A 201 nt-1.49□□□□□ -2.65
PRE1P22141 snR65snR65 100 nt-1.5□□□□□ -2.65
PRE1P22141 YOR102WYOR102W 351 nt-1.5□□□□□ -2.65
PRE1P22141 tY(GUA)QtY(GUA)Q 84 nt-1.51□□□□□ -2.65
PRE1P22141 snR52snR52 92 nt-1.52□□□□□ -2.65
PRE1P22141 YNR077CYNR077C 255 nt-1.53□□□□□ -2.65
PRE1P22141 Q0144Q0144 330 nt-1.54□□□□□ -2.66
PRE1P22141 YOR376W-AYOR376W-A 156 nt-1.55□□□□□ -2.66
PRE1P22141 YBR196C-AYBR196C-A 150 nt-1.55□□□□□ -2.66
PRE1P22141 YLR342W-AYLR342W-A 174 nt-1.6□□□□□ -2.67
PRE1P22141 snR80snR80 171 nt-1.61□□□□□ -2.67
PRE1P22141 YHL015W-AYHL015W-A 84 nt-1.61□□□□□ -2.67
PRE1P22141 YMR315W-AYMR315W-A 108 nt-1.61□□□□□ -2.67
PRE1P22141 snR81snR81 201 nt-1.63□□□□□ -2.67
PRE1P22141 YOR231C-AYOR231C-A 201 nt-1.69□□□□□ -2.68
PRE1P22141 YHR175W-AYHR175W-A 150 nt-1.72□□□□□ -2.68
PRE1P22141 YNL198CYNL198C 303 nt-1.72□□□□□ -2.68
PRE1P22141 YHR180C-BYHR180C-B 105 nt-1.74□□□□□ -2.69
PRE1P22141 YBL053WYBL053W 375 nt-1.75□□□□□ -2.69
PRE1P22141 YJL150WYJL150W 303 nt-1.76□□□□□ -2.69
PRE1P22141 tR(ACG)Q2tR(ACG)Q2 74 nt-1.77□□□□□ -2.69
PRE1P22141 YOR316C-AYOR316C-A 210 nt-1.78□□□□□ -2.69
PRE1P22141 YKL106C-AYKL106C-A 120 nt-1.84□□□□□ -2.7
PRE1P22141 YOR309CYOR309C 381 nt-1.85□□□□□ -2.71
PRE1P22141 snR56snR56 88 nt-1.86□□□□□ -2.71
PRE1P22141 SOM1YEL059C-A 225 nt-1.86□□□□□ -2.71
PRE1P22141 YBR109W-AYBR109W-A 225 nt-1.88□□□□□ -2.71
PRE1P22141 YDR406W-AYDR406W-A 246 nt-1.92□□□□□ -2.72
PRE1P22141 snR38snR38 95 nt-1.96□□□□□ -2.72
PRE1P22141 YBR296C-AYBR296C-A 120 nt-1.97□□□□□ -2.72
PRE1P22141 YCR095W-AYCR095W-A 159 nt-1.98□□□□□ -2.73
PRE1P22141 YDR524W-CYDR524W-C 90 nt-2□□□□□ -2.73
PRE1P22141 RPL41AYDL184C 78 nt-2.01□□□□□ -2.73
PRE1P22141 YBL071C-BYBL071C-B 99 nt-2.05□□□□□ -2.74
PRE1P22141 YOL083C-AYOL083C-A 141 nt-2.07□□□□□ -2.74
PRE1P22141 YGR151CYGR151C 336 nt-2.08□□□□□ -2.74
PRE1P22141 snR6snR6 112 nt-2.09□□□□□ -2.74
PRE1P22141 YOL164W-AYOL164W-A 183 nt-2.15□□□□□ -2.75
PRE1P22141 YBR126W-BYBR126W-B 144 nt-2.15□□□□□ -2.75
PRE1P22141 YOR335W-AYOR335W-A 81 nt-2.23□□□□□ -2.77
PRE1P22141 snR47snR47 99 nt-2.23□□□□□ -2.77
PRE1P22141 YAL037C-AYAL037C-A 93 nt-2.26□□□□□ -2.77
PRE1P22141 snR73snR73 106 nt-2.27□□□□□ -2.77
PRE1P22141 YMR046W-AYMR046W-A 129 nt-2.27□□□□□ -2.77
PRE1P22141 YCL001W-BYCL001W-B 255 nt-2.27□□□□□ -2.77
PRE1P22141 SPG3YDR504C 384 nt-2.3□□□□□ -2.78
PRE1P22141 tV(UAC)QtV(UAC)Q 76 nt-2.42□□□□□ -2.8
PRE1P22141 tS(GCU)Q1tS(GCU)Q1 86 nt-2.43□□□□□ -2.8
PRE1P22141 YBL100W-CYBL100W-C 120 nt-2.43□□□□□ -2.8
PRE1P22141 RPL41BYDL133C-A 78 nt-2.44□□□□□ -2.8
PRE1P22141 YKL225WYKL225W 348 nt-2.44□□□□□ -2.8
PRE1P22141 YLR466C-BYLR466C-B 117 nt-2.47□□□□□ -2.8
PRE1P22141 YDL114W-AYDL114W-A 114 nt-2.5□□□□□ -2.81
PRE1P22141 YNL337WYNL337W 255 nt-2.52□□□□□ -2.81
PRE1P22141 tM(CAU)Q1tM(CAU)Q1 76 nt-2.56□□□□□ -2.82
PRE1P22141 YNL338WYNL338W 159 nt-2.56□□□□□ -2.82
PRE1P22141 snR85snR85 171 nt-2.62□□□□□ -2.83
PRE1P22141 Q0142Q0142 177 nt-2.7□□□□□ -2.84
PRE1P22141 YDL159W-AYDL159W-A 132 nt-2.74□□□□□ -2.85
PRE1P22141 YDR034C-AYDR034C-A 177 nt-2.76□□□□□ -2.85
PRE1P22141 YGL041C-BYGL041C-B 183 nt-2.76□□□□□ -2.85
PRE1P22141 YGL007C-AYGL007C-A 87 nt-2.79□□□□□ -2.86
PRE1P22141 YGR122C-AYGR122C-A 129 nt-2.79□□□□□ -2.86
Retrieved 100 of 7,029 protein–RNA pairs in 25.8 ms