Protein–RNA interactions for Protein: P21242

PRE10, Probable proteasome subunit alpha type-7, yeastyeast

Known RBP RIP-Chip data

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRE10P21242 EST2YLR318W 2655 nt1.38□□□□□ -2.19
PRE10P21242 snR69snR69 101 nt1.38□□□□□ -2.19
PRE10P21242 YSP1YHR155W 3687 nt1.37□□□□□ -2.19
PRE10P21242 CSE1YGL238W 2883 nt1.37□□□□□ -2.19
PRE10P21242 SIP4YJL089W 2490 nt1.37□□□□□ -2.19
PRE10P21242 NUP145YGL092W 3954 nt1.36□□□□□ -2.19
PRE10P21242 ROM2YLR371W 4071 nt1.35□□□□□ -2.19
PRE10P21242 YBR109W-AYBR109W-A 225 nt1.35□□□□□ -2.19
PRE10P21242 YML054C-AYML054C-A 159 nt1.34□□□□□ -2.19
PRE10P21242 ULP2YIL031W 3105 nt1.33□□□□□ -2.2
PRE10P21242 YHR180C-BYHR180C-B 105 nt1.32□□□□□ -2.2
PRE10P21242 CDC39YCR093W 6327 nt1.32□□□□□ -2.2
PRE10P21242 RDS3YPR094W 324 nt1.31□□□□□ -2.2
PRE10P21242 MSN5YDR335W 3675 nt1.3□□□□□ -2.2
PRE10P21242 YNL284C-BYNL284C-B 5268 nt1.29□□□□□ -2.2
PRE10P21242 YDL159W-AYDL159W-A 132 nt1.29□□□□□ -2.2
PRE10P21242 RPL41AYDL184C 78 nt1.29□□□□□ -2.2
PRE10P21242 tF(GAA)BtF(GAA)B 73 nt1.29□□□□□ -2.2
PRE10P21242 tF(GAA)FtF(GAA)F 73 nt1.29□□□□□ -2.2
PRE10P21242 tF(GAA)GtF(GAA)G 73 nt1.29□□□□□ -2.2
PRE10P21242 tF(GAA)H1tF(GAA)H1 73 nt1.29□□□□□ -2.2
PRE10P21242 tF(GAA)H2tF(GAA)H2 73 nt1.29□□□□□ -2.2
PRE10P21242 tF(GAA)MtF(GAA)M 73 nt1.29□□□□□ -2.2
PRE10P21242 tF(GAA)P1tF(GAA)P1 73 nt1.29□□□□□ -2.2
PRE10P21242 tF(GAA)P2tF(GAA)P2 73 nt1.29□□□□□ -2.2
PRE10P21242 snR38snR38 95 nt1.26□□□□□ -2.21
PRE10P21242 NIP1YMR309C 2439 nt1.25□□□□□ -2.21
PRE10P21242 YLL006W-AYLL006W-A 177 nt1.24□□□□□ -2.21
PRE10P21242 YLR149C-AYLR149C-A 87 nt1.24□□□□□ -2.21
PRE10P21242 YBR296C-AYBR296C-A 120 nt1.24□□□□□ -2.21
PRE10P21242 BUD3YCL014W 4911 nt1.23□□□□□ -2.21
PRE10P21242 SPT7YBR081C 3999 nt1.21□□□□□ -2.22
PRE10P21242 BUL2YML111W 2763 nt1.21□□□□□ -2.22
PRE10P21242 AI1Q0050 2505 nt1.21□□□□□ -2.22
PRE10P21242 SKI7YOR076C 2244 nt1.2□□□□□ -2.22
PRE10P21242 tQ(UUG)QtQ(UUG)Q 76 nt1.2□□□□□ -2.22
PRE10P21242 UTP20YBL004W 7482 nt1.2□□□□□ -2.22
PRE10P21242 YKL096C-BYKL096C-B 150 nt1.19□□□□□ -2.22
PRE10P21242 BEM2YER155C 6504 nt1.19□□□□□ -2.22
PRE10P21242 YER078W-AYER078W-A 165 nt1.18□□□□□ -2.22
PRE10P21242 YJL077W-AYJL077W-A 87 nt1.18□□□□□ -2.22
PRE10P21242 VAM6YDL077C 3150 nt1.18□□□□□ -2.22
PRE10P21242 YJR029WYJR029W 5268 nt1.17□□□□□ -2.22
PRE10P21242 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
PRE10P21242 YGR122C-AYGR122C-A 129 nt1.15□□□□□ -2.23
PRE10P21242 YPL060C-AYPL060C-A 3315 nt1.15□□□□□ -2.23
PRE10P21242 snR75snR75 89 nt1.13□□□□□ -2.23
PRE10P21242 SCC2YDR180W 4482 nt1.13□□□□□ -2.23
PRE10P21242 RKR1YMR247C 4689 nt1.12□□□□□ -2.23
PRE10P21242 YNL054W-BYNL054W-B 5250 nt1.11□□□□□ -2.23
PRE10P21242 NST1YNL091W 3723 nt1.11□□□□□ -2.23
PRE10P21242 YOR192C-BYOR192C-B 5313 nt1.11□□□□□ -2.23
PRE10P21242 YOL014WYOL014W 375 nt1.1□□□□□ -2.23
PRE10P21242 DOP1YDR141C 5097 nt1.07□□□□□ -2.24
PRE10P21242 YER090C-AYER090C-A 90 nt1.04□□□□□ -2.24
PRE10P21242 YPR117WYPR117W 7470 nt1.03□□□□□ -2.25
PRE10P21242 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
PRE10P21242 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
PRE10P21242 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
PRE10P21242 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
PRE10P21242 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
PRE10P21242 YMR160WYMR160W 2451 nt1.01□□□□□ -2.25
PRE10P21242 PET111YMR257C 2403 nt0.96□□□□□ -2.26 RIP-Chip
PRE10P21242 YKL145W-AYKL145W-A 93 nt0.94□□□□□ -2.26
PRE10P21242 snR67snR67 82 nt0.93□□□□□ -2.26
PRE10P21242 LTE1YAL024C 4308 nt0.86□□□□□ -2.27
PRE10P21242 tT(AGU)BtT(AGU)B 73 nt0.84□□□□□ -2.27
PRE10P21242 tT(AGU)CtT(AGU)C 73 nt0.84□□□□□ -2.27
PRE10P21242 tT(AGU)DtT(AGU)D 73 nt0.84□□□□□ -2.27
PRE10P21242 tT(AGU)HtT(AGU)H 73 nt0.84□□□□□ -2.27
PRE10P21242 tT(AGU)I1tT(AGU)I1 73 nt0.84□□□□□ -2.27
PRE10P21242 tT(AGU)I2tT(AGU)I2 73 nt0.84□□□□□ -2.27
PRE10P21242 tT(AGU)JtT(AGU)J 73 nt0.84□□□□□ -2.27
PRE10P21242 tT(AGU)N1tT(AGU)N1 73 nt0.84□□□□□ -2.27
PRE10P21242 tT(AGU)N2tT(AGU)N2 73 nt0.84□□□□□ -2.27
PRE10P21242 tT(AGU)O1tT(AGU)O1 73 nt0.84□□□□□ -2.27
PRE10P21242 tT(AGU)O2tT(AGU)O2 73 nt0.84□□□□□ -2.27
PRE10P21242 MLP2YIL149C 5040 nt0.8□□□□□ -2.28
PRE10P21242 YKL106C-AYKL106C-A 120 nt0.78□□□□□ -2.28
PRE10P21242 YBL100W-BYBL100W-B 5313 nt0.77□□□□□ -2.29
PRE10P21242 YDL114W-AYDL114W-A 114 nt0.76□□□□□ -2.29
PRE10P21242 THO2YNL139C 4794 nt0.73□□□□□ -2.29
PRE10P21242 UTP10YJL109C 5310 nt0.71□□□□□ -2.3
PRE10P21242 FMP27YLR454W 7887 nt0.71□□□□□ -2.3
PRE10P21242 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
PRE10P21242 YPR159C-AYPR159C-A 102 nt0.68□□□□□ -2.3
PRE10P21242 tV(UAC)QtV(UAC)Q 76 nt0.66□□□□□ -2.3
PRE10P21242 IQG1YPL242C 4488 nt0.63□□□□□ -2.31
PRE10P21242 MLP1YKR095W 5628 nt0.61□□□□□ -2.31
PRE10P21242 YOR186C-AYOR186C-A 210 nt0.6□□□□□ -2.31
PRE10P21242 YML100W-AYML100W-A 174 nt0.59□□□□□ -2.31
PRE10P21242 YOR376W-AYOR376W-A 156 nt0.59□□□□□ -2.31
PRE10P21242 snR77snR77 88 nt0.47□□□□□ -2.33
PRE10P21242 YOR316C-AYOR316C-A 210 nt0.47□□□□□ -2.33
PRE10P21242 snR40snR40 97 nt0.46□□□□□ -2.34
PRE10P21242 SOV1YMR066W 2697 nt0.46□□□□□ -2.34
PRE10P21242 PAU9YBL108C-A 129 nt0.44□□□□□ -2.34
PRE10P21242 SBH2YER019C-A 267 nt0.42□□□□□ -2.34
PRE10P21242 snR128snR128 126 nt0.4□□□□□ -2.35
PRE10P21242 ESP1YGR098C 4893 nt0.36□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 38.2 ms