Protein–RNA interactions for Protein: P20676

NUP1, Nucleoporin NUP1, yeastyeast

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP1P20676 tF(GAA)GtF(GAA)G 73 nt1□□□□□ -2.25
NUP1P20676 tF(GAA)H1tF(GAA)H1 73 nt1□□□□□ -2.25
NUP1P20676 tF(GAA)H2tF(GAA)H2 73 nt1□□□□□ -2.25
NUP1P20676 tF(GAA)MtF(GAA)M 73 nt1□□□□□ -2.25
NUP1P20676 tF(GAA)P1tF(GAA)P1 73 nt1□□□□□ -2.25
NUP1P20676 tF(GAA)P2tF(GAA)P2 73 nt1□□□□□ -2.25
NUP1P20676 YLR286W-AYLR286W-A 135 nt1□□□□□ -2.25
NUP1P20676 YJR029WYJR029W 5268 nt0.98□□□□□ -2.25
NUP1P20676 YPR137C-BYPR137C-B 5268 nt0.98□□□□□ -2.25
NUP1P20676 YDR034C-AYDR034C-A 177 nt0.98□□□□□ -2.25
NUP1P20676 tD(GUC)QtD(GUC)Q 75 nt0.97□□□□□ -2.25
NUP1P20676 YGR240C-AYGR240C-A 201 nt0.97□□□□□ -2.25
NUP1P20676 YBL100W-CYBL100W-C 120 nt0.97□□□□□ -2.25
NUP1P20676 EST1YLR233C 2100 nt0.97□□□□□ -2.25
NUP1P20676 VAM6YDL077C 3150 nt0.95□□□□□ -2.26
NUP1P20676 snR69snR69 101 nt0.95□□□□□ -2.26
NUP1P20676 CSE1YGL238W 2883 nt0.94□□□□□ -2.26
NUP1P20676 BUL2YML111W 2763 nt0.94□□□□□ -2.26
NUP1P20676 YLL006W-AYLL006W-A 177 nt0.94□□□□□ -2.26
NUP1P20676 SCC2YDR180W 4482 nt0.93□□□□□ -2.26
NUP1P20676 ORC3YLL004W 1851 nt0.91□□□□□ -2.26
NUP1P20676 YPR117WYPR117W 7470 nt0.9□□□□□ -2.27
NUP1P20676 YLR299C-AYLR299C-A 93 nt0.89□□□□□ -2.27
NUP1P20676 NIP1YMR309C 2439 nt0.88□□□□□ -2.27
NUP1P20676 RDS3YPR094W 324 nt0.88□□□□□ -2.27
NUP1P20676 snR47snR47 99 nt0.88□□□□□ -2.27
NUP1P20676 YDL159C-BYDL159C-B 177 nt0.87□□□□□ -2.27
NUP1P20676 YJL077W-AYJL077W-A 87 nt0.87□□□□□ -2.27
NUP1P20676 UTP20YBL004W 7482 nt0.87□□□□□ -2.27
NUP1P20676 RKR1YMR247C 4689 nt0.86□□□□□ -2.27
NUP1P20676 YOL014WYOL014W 375 nt0.86□□□□□ -2.27
NUP1P20676 EMT1tM(CAU)D 73 nt0.84□□□□□ -2.27
NUP1P20676 EMT5tM(CAU)J1 73 nt0.84□□□□□ -2.27
NUP1P20676 EMT3tM(CAU)J2 73 nt0.84□□□□□ -2.27
NUP1P20676 EMT4tM(CAU)M 73 nt0.84□□□□□ -2.27
NUP1P20676 EMT2tM(CAU)O2 73 nt0.84□□□□□ -2.27
NUP1P20676 BEM2YER155C 6504 nt0.82□□□□□ -2.28
NUP1P20676 YNL054W-BYNL054W-B 5250 nt0.8□□□□□ -2.28
NUP1P20676 LTE1YAL024C 4308 nt0.8□□□□□ -2.28
NUP1P20676 YOR192C-BYOR192C-B 5313 nt0.78□□□□□ -2.28
NUP1P20676 snR53snR53 91 nt0.78□□□□□ -2.28
NUP1P20676 snR64snR64 101 nt0.76□□□□□ -2.29
NUP1P20676 YKL145W-AYKL145W-A 93 nt0.76□□□□□ -2.29
NUP1P20676 YML054C-AYML054C-A 159 nt0.76□□□□□ -2.29
NUP1P20676 YDR371C-AYDR371C-A 105 nt0.75□□□□□ -2.29
NUP1P20676 YBR109W-AYBR109W-A 225 nt0.74□□□□□ -2.29
NUP1P20676 YMR160WYMR160W 2451 nt0.74□□□□□ -2.29
NUP1P20676 tQ(UUG)QtQ(UUG)Q 76 nt0.73□□□□□ -2.29
NUP1P20676 YHR180C-BYHR180C-B 105 nt0.73□□□□□ -2.29
NUP1P20676 YKL225WYKL225W 348 nt0.72□□□□□ -2.29
NUP1P20676 PET111YMR257C 2403 nt0.72□□□□□ -2.29
NUP1P20676 YER090C-AYER090C-A 90 nt0.7□□□□□ -2.3
NUP1P20676 YBL100W-BYBL100W-B 5313 nt0.69□□□□□ -2.3
NUP1P20676 RPL41AYDL184C 78 nt0.68□□□□□ -2.3
NUP1P20676 snR38snR38 95 nt0.68□□□□□ -2.3
NUP1P20676 YBR296C-AYBR296C-A 120 nt0.67□□□□□ -2.3
NUP1P20676 IQG1YPL242C 4488 nt0.67□□□□□ -2.3
NUP1P20676 snR50snR50 90 nt0.66□□□□□ -2.3
NUP1P20676 AI1Q0050 2505 nt0.64□□□□□ -2.31
NUP1P20676 MYO1YHR023W 5787 nt0.63□□□□□ -2.31
NUP1P20676 MLP1YKR095W 5628 nt0.63□□□□□ -2.31
NUP1P20676 tT(AGU)BtT(AGU)B 73 nt0.62□□□□□ -2.31
NUP1P20676 tT(AGU)CtT(AGU)C 73 nt0.62□□□□□ -2.31
NUP1P20676 tT(AGU)DtT(AGU)D 73 nt0.62□□□□□ -2.31
NUP1P20676 tT(AGU)HtT(AGU)H 73 nt0.62□□□□□ -2.31
NUP1P20676 tT(AGU)I1tT(AGU)I1 73 nt0.62□□□□□ -2.31
NUP1P20676 tT(AGU)I2tT(AGU)I2 73 nt0.62□□□□□ -2.31
NUP1P20676 tT(AGU)JtT(AGU)J 73 nt0.62□□□□□ -2.31
NUP1P20676 tT(AGU)N1tT(AGU)N1 73 nt0.62□□□□□ -2.31
NUP1P20676 tT(AGU)N2tT(AGU)N2 73 nt0.62□□□□□ -2.31
NUP1P20676 tT(AGU)O1tT(AGU)O1 73 nt0.62□□□□□ -2.31
NUP1P20676 tT(AGU)O2tT(AGU)O2 73 nt0.62□□□□□ -2.31
NUP1P20676 YPR159C-AYPR159C-A 102 nt0.61□□□□□ -2.31
NUP1P20676 YMR272W-AYMR272W-A 114 nt0.58□□□□□ -2.32
NUP1P20676 UTP10YJL109C 5310 nt0.55□□□□□ -2.32
NUP1P20676 snR67snR67 82 nt0.54□□□□□ -2.32
NUP1P20676 MLP2YIL149C 5040 nt0.53□□□□□ -2.32
NUP1P20676 SKI7YOR076C 2244 nt0.5□□□□□ -2.33
NUP1P20676 YDL159W-AYDL159W-A 132 nt0.49□□□□□ -2.33
NUP1P20676 YOR186C-AYOR186C-A 210 nt0.49□□□□□ -2.33
NUP1P20676 THO2YNL139C 4794 nt0.46□□□□□ -2.34
NUP1P20676 YER078W-AYER078W-A 165 nt0.44□□□□□ -2.34
NUP1P20676 YLR149C-AYLR149C-A 87 nt0.44□□□□□ -2.34
NUP1P20676 ESP1YGR098C 4893 nt0.44□□□□□ -2.34
NUP1P20676 YGR122C-AYGR122C-A 129 nt0.42□□□□□ -2.34
NUP1P20676 SOV1YMR066W 2697 nt0.42□□□□□ -2.34
NUP1P20676 YML100W-AYML100W-A 174 nt0.41□□□□□ -2.34
NUP1P20676 FMP27YLR454W 7887 nt0.36□□□□□ -2.35
NUP1P20676 YKL096C-BYKL096C-B 150 nt0.33□□□□□ -2.36
NUP1P20676 YKL106C-AYKL106C-A 120 nt0.31□□□□□ -2.36
NUP1P20676 YOL013W-AYOL013W-A 192 nt0.27□□□□□ -2.37
NUP1P20676 snR128snR128 126 nt0.23□□□□□ -2.37
NUP1P20676 YOR376W-AYOR376W-A 156 nt0.19□□□□□ -2.38
NUP1P20676 YDL114W-AYDL114W-A 114 nt0.18□□□□□ -2.38
NUP1P20676 tV(UAC)QtV(UAC)Q 76 nt0.18□□□□□ -2.38
NUP1P20676 YOR316C-AYOR316C-A 210 nt0.14□□□□□ -2.39
NUP1P20676 PAU9YBL108C-A 129 nt0.1□□□□□ -2.39
NUP1P20676 snR75snR75 89 nt0.08□□□□□ -2.4
NUP1P20676 tA(UGC)QtA(UGC)Q 76 nt0.06□□□□□ -2.4
NUP1P20676 SBH2YER019C-A 267 nt0.05□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms