Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHRNB2P17787 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.16■□□□□ 0.98
CHRNB2P17787 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.16■□□□□ 0.98
CHRNB2P17787 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.16■□□□□ 0.98
CHRNB2P17787 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.16■□□□□ 0.98
CHRNB2P17787 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHRNB2P17787 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CHRNB2P17787 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHRNB2P17787 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB2P17787 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNB2P17787 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.15■□□□□ 0.98
CHRNB2P17787 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNB2P17787 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CHRNB2P17787 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CHRNB2P17787 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CHRNB2P17787 TSPY6P-201ENST00000448518 926 ntBASIC21.15■□□□□ 0.98
CHRNB2P17787 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNB2P17787 AC092666.2-201ENST00000613287 246 ntBASIC21.15■□□□□ 0.98
CHRNB2P17787 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.15■□□□□ 0.98
CHRNB2P17787 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNB2P17787 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.15■□□□□ 0.98
CHRNB2P17787 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNB2P17787 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHRNB2P17787 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB2P17787 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.15■□□□□ 0.98
CHRNB2P17787 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHRNB2P17787 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHRNB2P17787 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.14■□□□□ 0.98
CHRNB2P17787 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.14■□□□□ 0.98
CHRNB2P17787 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CHRNB2P17787 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHRNB2P17787 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHRNB2P17787 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CHRNB2P17787 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB2P17787 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB2P17787 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB2P17787 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CHRNB2P17787 DUSP5P2-201ENST00000426873 1033 ntBASIC21.14■□□□□ 0.97
CHRNB2P17787 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.14■□□□□ 0.97
CHRNB2P17787 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.14■□□□□ 0.97
CHRNB2P17787 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.14■□□□□ 0.97
CHRNB2P17787 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB2P17787 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB2P17787 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
CHRNB2P17787 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB2P17787 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB2P17787 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB2P17787 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB2P17787 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
CHRNB2P17787 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRNB2P17787 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB2P17787 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB2P17787 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.13■□□□□ 0.97
CHRNB2P17787 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRNB2P17787 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRNB2P17787 AC092118.2-201ENST00000613495 667 ntBASIC21.13■□□□□ 0.97
CHRNB2P17787 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB2P17787 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB2P17787 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB2P17787 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB2P17787 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.12■□□□□ 0.97
CHRNB2P17787 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CHRNB2P17787 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB2P17787 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB2P17787 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CHRNB2P17787 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CHRNB2P17787 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.12■□□□□ 0.97
CHRNB2P17787 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB2P17787 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CHRNB2P17787 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB2P17787 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CHRNB2P17787 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB2P17787 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.12■□□□□ 0.97
CHRNB2P17787 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms