Protein–RNA interactions for Protein: P16451

PDX1, Pyruvate dehydrogenase complex protein X component, mitochondrial, yeastyeast

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDX1P16451 YJL077W-AYJL077W-A 87 nt-0.32□□□□□ -2.46
PDX1P16451 snR80snR80 171 nt-0.33□□□□□ -2.46
PDX1P16451 SBH2YER019C-A 267 nt-0.33□□□□□ -2.46
PDX1P16451 YGR164WYGR164W 336 nt-0.35□□□□□ -2.47
PDX1P16451 snR46snR46 197 nt-0.36□□□□□ -2.47
PDX1P16451 snR39BsnR39B 96 nt-0.39□□□□□ -2.47
PDX1P16451 SEC10YLR166C 2616 nt-0.39□□□□□ -2.47
PDX1P16451 YNL067W-BYNL067W-B 141 nt-0.4□□□□□ -2.47
PDX1P16451 YGR146C-AYGR146C-A 162 nt-0.41□□□□□ -2.48
PDX1P16451 YLR342W-AYLR342W-A 174 nt-0.42□□□□□ -2.48
PDX1P16451 snR52snR52 92 nt-0.42□□□□□ -2.48
PDX1P16451 YOR329W-AYOR329W-A 210 nt-0.43□□□□□ -2.48
PDX1P16451 snR69snR69 101 nt-0.46□□□□□ -2.48
PDX1P16451 YJL113WYJL113W 4647 nt-0.46□□□□□ -2.48
PDX1P16451 tQ(UUG)QtQ(UUG)Q 76 nt-0.48□□□□□ -2.49
PDX1P16451 snR48snR48 113 nt-0.49□□□□□ -2.49
PDX1P16451 YDL007C-AYDL007C-A 258 nt-0.5□□□□□ -2.49
PDX1P16451 YIL071W-AYIL071W-A 477 nt-0.5□□□□□ -2.49
PDX1P16451 YML100W-AYML100W-A 174 nt-0.5□□□□□ -2.49
PDX1P16451 PMP2YEL017C-A 132 nt-0.53□□□□□ -2.49
PDX1P16451 YDR406W-AYDR406W-A 246 nt-0.55□□□□□ -2.5
PDX1P16451 URB1YKL014C 5295 nt-0.55□□□□□ -2.5
PDX1P16451 RDS3YPR094W 324 nt-0.57□□□□□ -2.5
PDX1P16451 tA(UGC)QtA(UGC)Q 76 nt-0.59□□□□□ -2.5
PDX1P16451 YHL015W-AYHL015W-A 84 nt-0.6□□□□□ -2.51
PDX1P16451 snR33snR33 183 nt-0.6□□□□□ -2.51
PDX1P16451 PAU9YBL108C-A 129 nt-0.61□□□□□ -2.51
PDX1P16451 tL(UAA)QtL(UAA)Q 85 nt-0.62□□□□□ -2.51
PDX1P16451 tT(UGU)G1tT(UGU)G1 72 nt-0.63□□□□□ -2.51
PDX1P16451 tT(UGU)G2tT(UGU)G2 72 nt-0.63□□□□□ -2.51
PDX1P16451 tT(UGU)PtT(UGU)P 72 nt-0.63□□□□□ -2.51
PDX1P16451 YER090C-AYER090C-A 90 nt-0.64□□□□□ -2.51
PDX1P16451 YNL205CYNL205C 423 nt-0.64□□□□□ -2.51
PDX1P16451 YOR102WYOR102W 351 nt-0.66□□□□□ -2.52
PDX1P16451 snR50snR50 90 nt-0.68□□□□□ -2.52
PDX1P16451 YNL266WYNL266W 420 nt-0.69□□□□□ -2.52
PDX1P16451 tD(GUC)QtD(GUC)Q 75 nt-0.71□□□□□ -2.52
PDX1P16451 YMR046W-AYMR046W-A 129 nt-0.71□□□□□ -2.52
PDX1P16451 YHL009W-BYHL009W-B 5409 nt-0.71□□□□□ -2.52
PDX1P16451 JLP2YMR132C 627 nt-0.73□□□□□ -2.53
PDX1P16451 snR161snR161 161 nt-0.76□□□□□ -2.53
PDX1P16451 YLR286W-AYLR286W-A 135 nt-0.78□□□□□ -2.53
PDX1P16451 YBR178WYBR178W 375 nt-0.78□□□□□ -2.53
PDX1P16451 YJL150WYJL150W 303 nt-0.79□□□□□ -2.54
PDX1P16451 tP(UGG)QtP(UGG)Q 72 nt-0.81□□□□□ -2.54
PDX1P16451 YDL159C-BYDL159C-B 177 nt-0.83□□□□□ -2.54
PDX1P16451 SPG3YDR504C 384 nt-0.83□□□□□ -2.54
PDX1P16451 snR67snR67 82 nt-0.84□□□□□ -2.54
PDX1P16451 YNL198CYNL198C 303 nt-0.86□□□□□ -2.55
PDX1P16451 tM(CAU)Q1tM(CAU)Q1 76 nt-0.9□□□□□ -2.55
PDX1P16451 YBR196C-AYBR196C-A 150 nt-0.94□□□□□ -2.56
PDX1P16451 SKI7YOR076C 2244 nt-0.95□□□□□ -2.56
PDX1P16451 YLR299C-AYLR299C-A 93 nt-0.98□□□□□ -2.57
PDX1P16451 YBL053WYBL053W 375 nt-1□□□□□ -2.57
PDX1P16451 YBR223W-AYBR223W-A 120 nt-1.01□□□□□ -2.57
PDX1P16451 SOM1YEL059C-A 225 nt-1.04□□□□□ -2.58
PDX1P16451 snR77snR77 88 nt-1.08□□□□□ -2.58
PDX1P16451 YCR095W-AYCR095W-A 159 nt-1.1□□□□□ -2.59
PDX1P16451 CDC65tQ(CUG)M 72 nt-1.11□□□□□ -2.59
PDX1P16451 YML054C-AYML054C-A 159 nt-1.12□□□□□ -2.59
PDX1P16451 tY(GUA)QtY(GUA)Q 84 nt-1.15□□□□□ -2.59
PDX1P16451 YLR466C-BYLR466C-B 117 nt-1.18□□□□□ -2.6
PDX1P16451 YGR151CYGR151C 336 nt-1.2□□□□□ -2.6
PDX1P16451 YGR240C-AYGR240C-A 201 nt-1.23□□□□□ -2.61
PDX1P16451 YHR180C-BYHR180C-B 105 nt-1.23□□□□□ -2.61
PDX1P16451 YMR315W-AYMR315W-A 108 nt-1.23□□□□□ -2.61
PDX1P16451 snR81snR81 201 nt-1.24□□□□□ -2.61
PDX1P16451 YNR077CYNR077C 255 nt-1.27□□□□□ -2.61
PDX1P16451 YOR376W-AYOR376W-A 156 nt-1.27□□□□□ -2.61
PDX1P16451 YNL338WYNL338W 159 nt-1.36□□□□□ -2.63
PDX1P16451 YOR309CYOR309C 381 nt-1.4□□□□□ -2.63
PDX1P16451 YCL001W-BYCL001W-B 255 nt-1.42□□□□□ -2.64
PDX1P16451 YNL337WYNL337W 255 nt-1.44□□□□□ -2.64
PDX1P16451 YOL083C-AYOL083C-A 141 nt-1.48□□□□□ -2.65
PDX1P16451 YOR316C-AYOR316C-A 210 nt-1.51□□□□□ -2.65
PDX1P16451 RPL41AYDL184C 78 nt-1.52□□□□□ -2.65
PDX1P16451 YKL106C-AYKL106C-A 120 nt-1.52□□□□□ -2.65
PDX1P16451 YBR296C-AYBR296C-A 120 nt-1.52□□□□□ -2.65
PDX1P16451 Q0032Q0032 291 nt-1.53□□□□□ -2.65
PDX1P16451 YBL071C-BYBL071C-B 99 nt-1.53□□□□□ -2.65
PDX1P16451 YBR109W-AYBR109W-A 225 nt-1.53□□□□□ -2.65
PDX1P16451 YOL164W-AYOL164W-A 183 nt-1.59□□□□□ -2.66
PDX1P16451 YAL037C-AYAL037C-A 93 nt-1.6□□□□□ -2.67
PDX1P16451 YBR126W-BYBR126W-B 144 nt-1.64□□□□□ -2.67
PDX1P16451 snR38snR38 95 nt-1.64□□□□□ -2.67
PDX1P16451 snR6snR6 112 nt-1.67□□□□□ -2.68
PDX1P16451 YGL007C-AYGL007C-A 87 nt-1.68□□□□□ -2.68
PDX1P16451 YBL100W-CYBL100W-C 120 nt-1.7□□□□□ -2.68
PDX1P16451 snR47snR47 99 nt-1.7□□□□□ -2.68
PDX1P16451 YOR335W-AYOR335W-A 81 nt-1.75□□□□□ -2.69
PDX1P16451 snR73snR73 106 nt-1.79□□□□□ -2.7
PDX1P16451 RPL41BYDL133C-A 78 nt-1.95□□□□□ -2.72
PDX1P16451 tS(GCU)Q1tS(GCU)Q1 86 nt-1.96□□□□□ -2.72
PDX1P16451 YGL041C-BYGL041C-B 183 nt-1.97□□□□□ -2.72
PDX1P16451 YKL225WYKL225W 348 nt-1.98□□□□□ -2.73
PDX1P16451 tV(UAC)QtV(UAC)Q 76 nt-2.01□□□□□ -2.73
PDX1P16451 YNL103W-AYNL103W-A 90 nt-2.01□□□□□ -2.73
PDX1P16451 snR61snR61 90 nt-2.03□□□□□ -2.73
PDX1P16451 YDL114W-AYDL114W-A 114 nt-2.05□□□□□ -2.74
PDX1P16451 YLR294CYLR294C 330 nt-2.05□□□□□ -2.74
Retrieved 100 of 7,029 protein–RNA pairs in 31.4 ms