Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFRAP16234 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
PDGFRAP16234 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PDGFRAP16234 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFRAP16234 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.93■□□□□ 0.94
PDGFRAP16234 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.93■□□□□ 0.94
PDGFRAP16234 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.93■□□□□ 0.94
PDGFRAP16234 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFRAP16234 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.93■□□□□ 0.94
PDGFRAP16234 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PDGFRAP16234 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.93■□□□□ 0.94
PDGFRAP16234 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFRAP16234 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFRAP16234 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFRAP16234 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.93■□□□□ 0.94
PDGFRAP16234 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PDGFRAP16234 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFRAP16234 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
PDGFRAP16234 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFRAP16234 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFRAP16234 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFRAP16234 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.92■□□□□ 0.94
PDGFRAP16234 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFRAP16234 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.92■□□□□ 0.94
PDGFRAP16234 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.92■□□□□ 0.94
PDGFRAP16234 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.92■□□□□ 0.94
PDGFRAP16234 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.92■□□□□ 0.94
PDGFRAP16234 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFRAP16234 KRT16P6-202ENST00000425692 1426 ntBASIC20.92■□□□□ 0.94
PDGFRAP16234 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFRAP16234 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PDGFRAP16234 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.92■□□□□ 0.94
PDGFRAP16234 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PDGFRAP16234 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFRAP16234 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.92■□□□□ 0.94
PDGFRAP16234 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFRAP16234 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFRAP16234 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFRAP16234 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFRAP16234 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.91■□□□□ 0.94
PDGFRAP16234 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFRAP16234 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PDGFRAP16234 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFRAP16234 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.91■□□□□ 0.94
PDGFRAP16234 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFRAP16234 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFRAP16234 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.91■□□□□ 0.94
PDGFRAP16234 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.91■□□□□ 0.94
PDGFRAP16234 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFRAP16234 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.91■□□□□ 0.94
PDGFRAP16234 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.91■□□□□ 0.94
PDGFRAP16234 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.91■□□□□ 0.94
PDGFRAP16234 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PDGFRAP16234 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PDGFRAP16234 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PDGFRAP16234 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.9■□□□□ 0.94
PDGFRAP16234 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.9■□□□□ 0.94
PDGFRAP16234 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PDGFRAP16234 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PDGFRAP16234 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
PDGFRAP16234 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.9■□□□□ 0.94
PDGFRAP16234 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.9■□□□□ 0.94
PDGFRAP16234 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
PDGFRAP16234 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.9■□□□□ 0.94
PDGFRAP16234 MIR4651-201ENST00000582622 73 ntBASIC20.9■□□□□ 0.94
PDGFRAP16234 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFRAP16234 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDGFRAP16234 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PDGFRAP16234 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.89■□□□□ 0.94
PDGFRAP16234 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDGFRAP16234 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PDGFRAP16234 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.89■□□□□ 0.93
PDGFRAP16234 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.89■□□□□ 0.93
PDGFRAP16234 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.89■□□□□ 0.93
PDGFRAP16234 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.89■□□□□ 0.93
PDGFRAP16234 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.89■□□□□ 0.93
PDGFRAP16234 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.89■□□□□ 0.93
PDGFRAP16234 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFRAP16234 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFRAP16234 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFRAP16234 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFRAP16234 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFRAP16234 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.89■□□□□ 0.93
PDGFRAP16234 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.88■□□□□ 0.93
PDGFRAP16234 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFRAP16234 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFRAP16234 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.88■□□□□ 0.93
PDGFRAP16234 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
PDGFRAP16234 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms