Protein–RNA interactions for Protein: P0CX47

RPS11A, 40S ribosomal protein S11-A, yeastyeast

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS11AP0CX47 YBR178WYBR178W 375 nt-1.95□□□□□ -2.72
RPS11AP0CX47 YMR172C-AYMR172C-A 384 nt-1.98□□□□□ -2.73
RPS11AP0CX47 YEL014CYEL014C 306 nt-1.99□□□□□ -2.73
RPS11AP0CX47 ATP19YOL077W-A 207 nt-2.04□□□□□ -2.74
RPS11AP0CX47 YOR329W-AYOR329W-A 210 nt-2.05□□□□□ -2.74
RPS11AP0CX47 YGR035CYGR035C 351 nt-2.07□□□□□ -2.74
RPS11AP0CX47 YJR157WYJR157W 363 nt-2.08□□□□□ -2.74
RPS11AP0CX47 YBR182C-AYBR182C-A 195 nt-2.08□□□□□ -2.74
RPS11AP0CX47 YAL016C-BYAL016C-B 186 nt-2.09□□□□□ -2.74
RPS11AP0CX47 YAL063C-AYAL063C-A 291 nt-2.1□□□□□ -2.75
RPS11AP0CX47 YBR126W-BYBR126W-B 144 nt-2.1□□□□□ -2.75
RPS11AP0CX47 YOR376W-AYOR376W-A 156 nt-2.11□□□□□ -2.75
RPS11AP0CX47 YOR293C-AYOR293C-A 150 nt-2.14□□□□□ -2.75
RPS11AP0CX47 YBR196C-AYBR196C-A 150 nt-2.14□□□□□ -2.75
RPS11AP0CX47 snR78snR78 87 nt-2.15□□□□□ -2.75
RPS11AP0CX47 YOR309CYOR309C 381 nt-2.15□□□□□ -2.75
RPS11AP0CX47 tR(UCU)Q1tR(UCU)Q1 73 nt-2.16□□□□□ -2.76
RPS11AP0CX47 YLR299C-AYLR299C-A 93 nt-2.16□□□□□ -2.76
RPS11AP0CX47 YDR183C-AYDR183C-A 258 nt-2.17□□□□□ -2.76
RPS11AP0CX47 YAL068W-AYAL068W-A 255 nt-2.19□□□□□ -2.76
RPS11AP0CX47 YBR131C-AYBR131C-A 90 nt-2.19□□□□□ -2.76
RPS11AP0CX47 YLR222C-AYLR222C-A 231 nt-2.23□□□□□ -2.77
RPS11AP0CX47 tF(GAA)QtF(GAA)Q 75 nt-2.26□□□□□ -2.77
RPS11AP0CX47 YER181CYER181C 324 nt-2.27□□□□□ -2.77
RPS11AP0CX47 YLR342W-AYLR342W-A 174 nt-2.29□□□□□ -2.78
RPS11AP0CX47 YOR102WYOR102W 351 nt-2.3□□□□□ -2.78
RPS11AP0CX47 YOR316C-AYOR316C-A 210 nt-2.3□□□□□ -2.78
RPS11AP0CX47 YHR180C-BYHR180C-B 105 nt-2.31□□□□□ -2.78
RPS11AP0CX47 YPL038W-AYPL038W-A 192 nt-2.32□□□□□ -2.78
RPS11AP0CX47 snR48snR48 113 nt-2.36□□□□□ -2.79
RPS11AP0CX47 YGL188C-AYGL188C-A 141 nt-2.37□□□□□ -2.79
RPS11AP0CX47 YPR197CYPR197C 564 nt-2.38□□□□□ -2.79
RPS11AP0CX47 YDR413CYDR413C 576 nt-2.39□□□□□ -2.79
RPS11AP0CX47 YKL106C-AYKL106C-A 120 nt-2.4□□□□□ -2.79
RPS11AP0CX47 YDR524W-CYDR524W-C 90 nt-2.41□□□□□ -2.8
RPS11AP0CX47 YNL097C-BYNL097C-B 123 nt-2.41□□□□□ -2.8
RPS11AP0CX47 YPR012WYPR012W 255 nt-2.41□□□□□ -2.8
RPS11AP0CX47 YKL118WYKL118W 312 nt-2.42□□□□□ -2.8
RPS11AP0CX47 YEL050W-AYEL050W-A 192 nt-2.43□□□□□ -2.8
RPS11AP0CX47 tL(UAA)QtL(UAA)Q 85 nt-2.43□□□□□ -2.8
RPS11AP0CX47 snR55snR55 98 nt-2.44□□□□□ -2.8
RPS11AP0CX47 RPL39YJL189W 156 nt-2.49□□□□□ -2.81
RPS11AP0CX47 YNL277W-AYNL277W-A 189 nt-2.51□□□□□ -2.81
RPS11AP0CX47 YOL083C-AYOL083C-A 141 nt-2.52□□□□□ -2.81
RPS11AP0CX47 YJL150WYJL150W 303 nt-2.56□□□□□ -2.82
RPS11AP0CX47 YHL015W-AYHL015W-A 84 nt-2.61□□□□□ -2.83
RPS11AP0CX47 YBR109W-AYBR109W-A 225 nt-2.62□□□□□ -2.83
RPS11AP0CX47 snR6snR6 112 nt-2.64□□□□□ -2.83
RPS11AP0CX47 YOR302WYOR302W 78 nt-2.65□□□□□ -2.83
RPS11AP0CX47 snR52snR52 92 nt-2.65□□□□□ -2.83
RPS11AP0CX47 GIM4YEL003W 336 nt-2.67□□□□□ -2.84
RPS11AP0CX47 YOL155W-AYOL155W-A 135 nt-2.67□□□□□ -2.84
RPS11AP0CX47 YDL240C-AYDL240C-A 138 nt-2.69□□□□□ -2.84
RPS11AP0CX47 YBR296C-AYBR296C-A 120 nt-2.72□□□□□ -2.84
RPS11AP0CX47 YDR157WYDR157W 402 nt-2.73□□□□□ -2.85
RPS11AP0CX47 RPL41AYDL184C 78 nt-2.74□□□□□ -2.85
RPS11AP0CX47 snR80snR80 171 nt-2.75□□□□□ -2.85
RPS11AP0CX47 YNL198CYNL198C 303 nt-2.75□□□□□ -2.85
RPS11AP0CX47 snR56snR56 88 nt-2.77□□□□□ -2.85
RPS11AP0CX47 YOR335W-AYOR335W-A 81 nt-2.77□□□□□ -2.85
RPS11AP0CX47 snR73snR73 106 nt-2.78□□□□□ -2.85
RPS11AP0CX47 YDR543CYDR543C 300 nt-2.8□□□□□ -2.86
RPS11AP0CX47 RPL41BYDL133C-A 78 nt-2.82□□□□□ -2.86
RPS11AP0CX47 SOM1YEL059C-A 225 nt-2.85□□□□□ -2.87
RPS11AP0CX47 snR38snR38 95 nt-2.86□□□□□ -2.87
RPS11AP0CX47 YPL152W-AYPL152W-A 99 nt-2.9□□□□□ -2.87
RPS11AP0CX47 YDR118W-AYDR118W-A 117 nt-2.95□□□□□ -2.88
RPS11AP0CX47 YCR095W-AYCR095W-A 159 nt-3.01□□□□□ -2.89
RPS11AP0CX47 YDR524C-AYDR524C-A 120 nt-3.01□□□□□ -2.89
RPS11AP0CX47 YOL166W-AYOL166W-A 156 nt-3.01□□□□□ -2.89
RPS11AP0CX47 snR65snR65 100 nt-3.04□□□□□ -2.9
RPS11AP0CX47 YDR406W-AYDR406W-A 246 nt-3.06□□□□□ -2.9
RPS11AP0CX47 YBL071C-BYBL071C-B 99 nt-3.07□□□□□ -2.9
RPS11AP0CX47 Q0017Q0017 162 nt-3.08□□□□□ -2.9
RPS11AP0CX47 YGR151CYGR151C 336 nt-3.1□□□□□ -2.91
RPS11AP0CX47 YBL053WYBL053W 375 nt-3.1□□□□□ -2.91
RPS11AP0CX47 YOL164W-AYOL164W-A 183 nt-3.1□□□□□ -2.91
RPS11AP0CX47 snR47snR47 99 nt-3.15□□□□□ -2.91
RPS11AP0CX47 snR85snR85 171 nt-3.2□□□□□ -2.92
RPS11AP0CX47 YDL114W-AYDL114W-A 114 nt-3.22□□□□□ -2.92
RPS11AP0CX47 Q0142Q0142 177 nt-3.22□□□□□ -2.92
RPS11AP0CX47 tV(UAC)QtV(UAC)Q 76 nt-3.22□□□□□ -2.92
RPS11AP0CX47 VAR1Q0140 1197 nt-3.24□□□□□ -2.93
RPS11AP0CX47 YBL100W-CYBL100W-C 120 nt-3.28□□□□□ -2.93
RPS11AP0CX47 YAL037C-AYAL037C-A 93 nt-3.31□□□□□ -2.94
RPS11AP0CX47 YKL225WYKL225W 348 nt-3.38□□□□□ -2.95
RPS11AP0CX47 SPG3YDR504C 384 nt-3.41□□□□□ -2.96
RPS11AP0CX47 snR87snR87 109 nt-3.44□□□□□ -2.96
RPS11AP0CX47 YOR231C-AYOR231C-A 201 nt-3.44□□□□□ -2.96
RPS11AP0CX47 tS(GCU)Q1tS(GCU)Q1 86 nt-3.46□□□□□ -2.96
RPS11AP0CX47 YCL001W-BYCL001W-B 255 nt-3.56□□□□□ -2.98
RPS11AP0CX47 YNL337WYNL337W 255 nt-3.57□□□□□ -2.98
RPS11AP0CX47 YHR175W-AYHR175W-A 150 nt-3.6□□□□□ -2.99
RPS11AP0CX47 YKL096C-BYKL096C-B 150 nt-3.66□□□□□ -3
RPS11AP0CX47 YGR122C-AYGR122C-A 129 nt-3.69□□□□□ -3
RPS11AP0CX47 YDL159W-AYDL159W-A 132 nt-3.75□□□□□ -3.01
RPS11AP0CX47 snR58snR58 96 nt-3.77□□□□□ -3.01
RPS11AP0CX47 YJR162CYJR162C 351 nt-3.78□□□□□ -3.01
RPS11AP0CX47 YDR034C-AYDR034C-A 177 nt-3.8□□□□□ -3.02
RPS11AP0CX47 YMR046W-AYMR046W-A 129 nt-3.81□□□□□ -3.02
Retrieved 100 of 7,029 protein–RNA pairs in 27.6 ms