Protein–RNA interactions for Protein: P0CE11

HVG1, Probable GDP-mannose transporter 2, yeastyeast

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HVG1P0CE11 tV(UAC)BtV(UAC)B 74 nt1.5□□□□□ -2.17
HVG1P0CE11 tV(UAC)DtV(UAC)D 74 nt1.5□□□□□ -2.17
HVG1P0CE11 ULP2YIL031W 3105 nt1.48□□□□□ -2.17
HVG1P0CE11 YLR299C-AYLR299C-A 93 nt1.47□□□□□ -2.17
HVG1P0CE11 EST1YLR233C 2100 nt1.46□□□□□ -2.18
HVG1P0CE11 IRA1YBR140C 9279 nt1.46□□□□□ -2.18
HVG1P0CE11 SIP4YJL089W 2490 nt1.44□□□□□ -2.18
HVG1P0CE11 snR69snR69 101 nt1.43□□□□□ -2.18
HVG1P0CE11 YDL159C-BYDL159C-B 177 nt1.43□□□□□ -2.18
HVG1P0CE11 ORC3YLL004W 1851 nt1.43□□□□□ -2.18
HVG1P0CE11 YLL006W-AYLL006W-A 177 nt1.41□□□□□ -2.18
HVG1P0CE11 SPT7YBR081C 3999 nt1.41□□□□□ -2.18
HVG1P0CE11 YNL284C-BYNL284C-B 5268 nt1.39□□□□□ -2.19
HVG1P0CE11 snR64snR64 101 nt1.38□□□□□ -2.19
HVG1P0CE11 RDS3YPR094W 324 nt1.38□□□□□ -2.19
HVG1P0CE11 HKR1YDR420W 5409 nt1.38□□□□□ -2.19
HVG1P0CE11 snR53snR53 91 nt1.37□□□□□ -2.19
HVG1P0CE11 PET127YOR017W 2403 nt1.37□□□□□ -2.19
HVG1P0CE11 NST1YNL091W 3723 nt1.36□□□□□ -2.19
HVG1P0CE11 DOP1YDR141C 5097 nt1.34□□□□□ -2.19
HVG1P0CE11 NIP1YMR309C 2439 nt1.34□□□□□ -2.19
HVG1P0CE11 YOL014WYOL014W 375 nt1.34□□□□□ -2.19
HVG1P0CE11 YHR180C-BYHR180C-B 105 nt1.32□□□□□ -2.2
HVG1P0CE11 snR50snR50 90 nt1.32□□□□□ -2.2
HVG1P0CE11 tQ(UUG)E2tQ(UUG)E2 72 nt1.3□□□□□ -2.2
HVG1P0CE11 YJL077W-AYJL077W-A 87 nt1.3□□□□□ -2.2
HVG1P0CE11 BUL2YML111W 2763 nt1.3□□□□□ -2.2
HVG1P0CE11 tQ(UUG)QtQ(UUG)Q 76 nt1.29□□□□□ -2.2
HVG1P0CE11 YKL225WYKL225W 348 nt1.28□□□□□ -2.2
HVG1P0CE11 YML054C-AYML054C-A 159 nt1.28□□□□□ -2.2
HVG1P0CE11 YPR117WYPR117W 7470 nt1.28□□□□□ -2.2
HVG1P0CE11 BUD3YCL014W 4911 nt1.26□□□□□ -2.21
HVG1P0CE11 RPL41AYDL184C 78 nt1.26□□□□□ -2.21
HVG1P0CE11 YBR109W-AYBR109W-A 225 nt1.2□□□□□ -2.22
HVG1P0CE11 RKR1YMR247C 4689 nt1.19□□□□□ -2.22
HVG1P0CE11 YBR296C-AYBR296C-A 120 nt1.18□□□□□ -2.22
HVG1P0CE11 YOR192C-BYOR192C-B 5313 nt1.18□□□□□ -2.22
HVG1P0CE11 SCC2YDR180W 4482 nt1.16□□□□□ -2.22
HVG1P0CE11 YMR160WYMR160W 2451 nt1.16□□□□□ -2.22
HVG1P0CE11 YPL060C-AYPL060C-A 3315 nt1.16□□□□□ -2.22
HVG1P0CE11 LTE1YAL024C 4308 nt1.14□□□□□ -2.23
HVG1P0CE11 YJR029WYJR029W 5268 nt1.09□□□□□ -2.23
HVG1P0CE11 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.23
HVG1P0CE11 YKL145W-AYKL145W-A 93 nt1.09□□□□□ -2.23
HVG1P0CE11 AI1Q0050 2505 nt1.09□□□□□ -2.24
HVG1P0CE11 YDR371C-AYDR371C-A 105 nt1.08□□□□□ -2.24
HVG1P0CE11 MYO1YHR023W 5787 nt1.08□□□□□ -2.24
HVG1P0CE11 PET111YMR257C 2403 nt1.07□□□□□ -2.24
HVG1P0CE11 snR38snR38 95 nt1.07□□□□□ -2.24
HVG1P0CE11 SKI7YOR076C 2244 nt1.07□□□□□ -2.24
HVG1P0CE11 YER090C-AYER090C-A 90 nt1.06□□□□□ -2.24
HVG1P0CE11 BEM2YER155C 6504 nt1.03□□□□□ -2.25
HVG1P0CE11 YDL159W-AYDL159W-A 132 nt1.02□□□□□ -2.25
HVG1P0CE11 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
HVG1P0CE11 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
HVG1P0CE11 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
HVG1P0CE11 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
HVG1P0CE11 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
HVG1P0CE11 VAM6YDL077C 3150 nt0.98□□□□□ -2.25
HVG1P0CE11 YGR122C-AYGR122C-A 129 nt0.95□□□□□ -2.26
HVG1P0CE11 snR67snR67 82 nt0.93□□□□□ -2.26
HVG1P0CE11 IQG1YPL242C 4488 nt0.92□□□□□ -2.26
HVG1P0CE11 YLR149C-AYLR149C-A 87 nt0.91□□□□□ -2.26
HVG1P0CE11 MLP1YKR095W 5628 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)BtT(AGU)B 73 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)CtT(AGU)C 73 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)DtT(AGU)D 73 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)HtT(AGU)H 73 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)I1tT(AGU)I1 73 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)I2tT(AGU)I2 73 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)JtT(AGU)J 73 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)N1tT(AGU)N1 73 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)N2tT(AGU)N2 73 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)O1tT(AGU)O1 73 nt0.88□□□□□ -2.27
HVG1P0CE11 tT(AGU)O2tT(AGU)O2 73 nt0.88□□□□□ -2.27
HVG1P0CE11 YKL096C-BYKL096C-B 150 nt0.85□□□□□ -2.27
HVG1P0CE11 FMP27YLR454W 7887 nt0.85□□□□□ -2.27
HVG1P0CE11 YNL054W-BYNL054W-B 5250 nt0.84□□□□□ -2.27
HVG1P0CE11 THO2YNL139C 4794 nt0.83□□□□□ -2.28
HVG1P0CE11 YBL100W-BYBL100W-B 5313 nt0.76□□□□□ -2.29
HVG1P0CE11 YOR186C-AYOR186C-A 210 nt0.75□□□□□ -2.29
HVG1P0CE11 YPR159C-AYPR159C-A 102 nt0.74□□□□□ -2.29
HVG1P0CE11 UTP10YJL109C 5310 nt0.72□□□□□ -2.29
HVG1P0CE11 snR75snR75 89 nt0.69□□□□□ -2.3
HVG1P0CE11 YKL106C-AYKL106C-A 120 nt0.68□□□□□ -2.3
HVG1P0CE11 YER078W-AYER078W-A 165 nt0.67□□□□□ -2.3
HVG1P0CE11 MLP2YIL149C 5040 nt0.67□□□□□ -2.3
HVG1P0CE11 YMR272W-AYMR272W-A 114 nt0.6□□□□□ -2.31
HVG1P0CE11 YML100W-AYML100W-A 174 nt0.56□□□□□ -2.32
HVG1P0CE11 YDL114W-AYDL114W-A 114 nt0.55□□□□□ -2.32
HVG1P0CE11 snR128snR128 126 nt0.46□□□□□ -2.34
HVG1P0CE11 ESP1YGR098C 4893 nt0.45□□□□□ -2.34
HVG1P0CE11 PAU9YBL108C-A 129 nt0.44□□□□□ -2.34
HVG1P0CE11 SOV1YMR066W 2697 nt0.43□□□□□ -2.34
HVG1P0CE11 YOR376W-AYOR376W-A 156 nt0.41□□□□□ -2.34
HVG1P0CE11 tV(UAC)QtV(UAC)Q 76 nt0.38□□□□□ -2.35
HVG1P0CE11 YOL013W-AYOL013W-A 192 nt0.37□□□□□ -2.35
HVG1P0CE11 YOR316C-AYOR316C-A 210 nt0.32□□□□□ -2.36
HVG1P0CE11 YJL113WYJL113W 4647 nt0.29□□□□□ -2.36
HVG1P0CE11 SBH2YER019C-A 267 nt0.27□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 26.2 ms