Protein–RNA interactions for Protein: P0C0X0

RPS28B, 40S ribosomal protein S28-B, yeastyeast

Known RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28BP0C0X0 YMR172C-AYMR172C-A 384 nt-1.95□□□□□ -2.72
RPS28BP0C0X0 YOR293C-AYOR293C-A 150 nt-1.97□□□□□ -2.72
RPS28BP0C0X0 YGR146C-AYGR146C-A 162 nt-1.99□□□□□ -2.73
RPS28BP0C0X0 YOR309CYOR309C 381 nt-1.99□□□□□ -2.73
RPS28BP0C0X0 YDR183C-AYDR183C-A 258 nt-2.01□□□□□ -2.73
RPS28BP0C0X0 tM(CAU)Q2tM(CAU)Q2 78 nt-2.01□□□□□ -2.73
RPS28BP0C0X0 YFL019CYFL019C 354 nt-2.03□□□□□ -2.73
RPS28BP0C0X0 YGL041CYGL041C 204 nt-2.05□□□□□ -2.74
RPS28BP0C0X0 YLR286W-AYLR286W-A 135 nt-2.07□□□□□ -2.74
RPS28BP0C0X0 YOR381W-AYOR381W-A 168 nt-2.08□□□□□ -2.74
RPS28BP0C0X0 tD(GUC)QtD(GUC)Q 75 nt-2.09□□□□□ -2.74
RPS28BP0C0X0 YBR182C-AYBR182C-A 195 nt-2.12□□□□□ -2.75
RPS28BP0C0X0 YBR178WYBR178W 375 nt-2.13□□□□□ -2.75
RPS28BP0C0X0 YOR376W-AYOR376W-A 156 nt-2.15□□□□□ -2.75
RPS28BP0C0X0 YDL159C-BYDL159C-B 177 nt-2.16□□□□□ -2.76
RPS28BP0C0X0 YEL014CYEL014C 306 nt-2.25□□□□□ -2.77
RPS28BP0C0X0 YJR157WYJR157W 363 nt-2.28□□□□□ -2.77
RPS28BP0C0X0 YER181CYER181C 324 nt-2.29□□□□□ -2.78
RPS28BP0C0X0 YDR413CYDR413C 576 nt-2.31□□□□□ -2.78
RPS28BP0C0X0 tF(GAA)QtF(GAA)Q 75 nt-2.31□□□□□ -2.78
RPS28BP0C0X0 YBR196C-AYBR196C-A 150 nt-2.31□□□□□ -2.78
RPS28BP0C0X0 YDR524W-CYDR524W-C 90 nt-2.32□□□□□ -2.78
RPS28BP0C0X0 YAL016C-BYAL016C-B 186 nt-2.32□□□□□ -2.78
RPS28BP0C0X0 YOL083C-AYOL083C-A 141 nt-2.32□□□□□ -2.78
RPS28BP0C0X0 YPL038W-AYPL038W-A 192 nt-2.32□□□□□ -2.78
RPS28BP0C0X0 YOR329W-AYOR329W-A 210 nt-2.33□□□□□ -2.78
RPS28BP0C0X0 YPR197CYPR197C 564 nt-2.33□□□□□ -2.78
RPS28BP0C0X0 YLR342W-AYLR342W-A 174 nt-2.35□□□□□ -2.79
RPS28BP0C0X0 RPL39YJL189W 156 nt-2.38□□□□□ -2.79
RPS28BP0C0X0 YLR299C-AYLR299C-A 93 nt-2.39□□□□□ -2.79
RPS28BP0C0X0 YOR316C-AYOR316C-A 210 nt-2.41□□□□□ -2.8
RPS28BP0C0X0 YBR131C-AYBR131C-A 90 nt-2.43□□□□□ -2.8
RPS28BP0C0X0 YPR012WYPR012W 255 nt-2.45□□□□□ -2.8
RPS28BP0C0X0 YDR543CYDR543C 300 nt-2.46□□□□□ -2.8
RPS28BP0C0X0 YLR222C-AYLR222C-A 231 nt-2.46□□□□□ -2.8
RPS28BP0C0X0 YHR180C-BYHR180C-B 105 nt-2.49□□□□□ -2.81
RPS28BP0C0X0 YNL097C-BYNL097C-B 123 nt-2.49□□□□□ -2.81
RPS28BP0C0X0 YNL277W-AYNL277W-A 189 nt-2.52□□□□□ -2.81
RPS28BP0C0X0 YDR157WYDR157W 402 nt-2.54□□□□□ -2.82
RPS28BP0C0X0 YKL106C-AYKL106C-A 120 nt-2.54□□□□□ -2.82
RPS28BP0C0X0 snR48snR48 113 nt-2.55□□□□□ -2.82
RPS28BP0C0X0 snR55snR55 98 nt-2.56□□□□□ -2.82
RPS28BP0C0X0 snR6snR6 112 nt-2.57□□□□□ -2.82
RPS28BP0C0X0 YDL240C-AYDL240C-A 138 nt-2.61□□□□□ -2.83
RPS28BP0C0X0 YOR102WYOR102W 351 nt-2.64□□□□□ -2.83
RPS28BP0C0X0 YOL155W-AYOL155W-A 135 nt-2.66□□□□□ -2.84
RPS28BP0C0X0 Q0017Q0017 162 nt-2.66□□□□□ -2.84
RPS28BP0C0X0 YKL118WYKL118W 312 nt-2.67□□□□□ -2.84
RPS28BP0C0X0 snR73snR73 106 nt-2.69□□□□□ -2.84
RPS28BP0C0X0 YOR335W-AYOR335W-A 81 nt-2.69□□□□□ -2.84
RPS28BP0C0X0 YGL188C-AYGL188C-A 141 nt-2.7□□□□□ -2.84
RPS28BP0C0X0 GIM4YEL003W 336 nt-2.73□□□□□ -2.85
RPS28BP0C0X0 tL(UAA)QtL(UAA)Q 85 nt-2.73□□□□□ -2.85
RPS28BP0C0X0 snR80snR80 171 nt-2.74□□□□□ -2.85
RPS28BP0C0X0 YDR118W-AYDR118W-A 117 nt-2.76□□□□□ -2.85
RPS28BP0C0X0 YBR109W-AYBR109W-A 225 nt-2.77□□□□□ -2.85
RPS28BP0C0X0 YJL150WYJL150W 303 nt-2.79□□□□□ -2.86
RPS28BP0C0X0 RPL41BYDL133C-A 78 nt-2.86□□□□□ -2.87
RPS28BP0C0X0 YDR524C-AYDR524C-A 120 nt-2.86□□□□□ -2.87
RPS28BP0C0X0 YOR302WYOR302W 78 nt-2.88□□□□□ -2.87
RPS28BP0C0X0 YBR296C-AYBR296C-A 120 nt-2.93□□□□□ -2.88
RPS28BP0C0X0 Q0142Q0142 177 nt-2.94□□□□□ -2.88
RPS28BP0C0X0 RPL41AYDL184C 78 nt-2.95□□□□□ -2.88
RPS28BP0C0X0 YHL015W-AYHL015W-A 84 nt-2.96□□□□□ -2.88
RPS28BP0C0X0 snR38snR38 95 nt-2.96□□□□□ -2.88
RPS28BP0C0X0 YOL166W-AYOL166W-A 156 nt-3.01□□□□□ -2.89
RPS28BP0C0X0 YPL152W-AYPL152W-A 99 nt-3.01□□□□□ -2.89
RPS28BP0C0X0 VAR1Q0140 1197 nt-3.05□□□□□ -2.9
RPS28BP0C0X0 snR52snR52 92 nt-3.06□□□□□ -2.9
RPS28BP0C0X0 snR56snR56 88 nt-3.09□□□□□ -2.9
RPS28BP0C0X0 snR65snR65 100 nt-3.09□□□□□ -2.9
RPS28BP0C0X0 YNL198CYNL198C 303 nt-3.09□□□□□ -2.9
RPS28BP0C0X0 YDR406W-AYDR406W-A 246 nt-3.2□□□□□ -2.92
RPS28BP0C0X0 SOM1YEL059C-A 225 nt-3.23□□□□□ -2.93
RPS28BP0C0X0 YNL337WYNL337W 255 nt-3.23□□□□□ -2.93
RPS28BP0C0X0 snR87snR87 109 nt-3.27□□□□□ -2.93
RPS28BP0C0X0 snR85snR85 171 nt-3.29□□□□□ -2.94
RPS28BP0C0X0 tV(UAC)QtV(UAC)Q 76 nt-3.29□□□□□ -2.94
RPS28BP0C0X0 YBL071C-BYBL071C-B 99 nt-3.29□□□□□ -2.94
RPS28BP0C0X0 YDL114W-AYDL114W-A 114 nt-3.33□□□□□ -2.94
RPS28BP0C0X0 YJR162CYJR162C 351 nt-3.33□□□□□ -2.94
RPS28BP0C0X0 YOL164W-AYOL164W-A 183 nt-3.34□□□□□ -2.94
RPS28BP0C0X0 snR47snR47 99 nt-3.35□□□□□ -2.95
RPS28BP0C0X0 YGR151CYGR151C 336 nt-3.39□□□□□ -2.95
RPS28BP0C0X0 YBL053WYBL053W 375 nt-3.39□□□□□ -2.95
RPS28BP0C0X0 YCR095W-AYCR095W-A 159 nt-3.44□□□□□ -2.96
RPS28BP0C0X0 SPG3YDR504C 384 nt-3.52□□□□□ -2.97
RPS28BP0C0X0 YKL225WYKL225W 348 nt-3.57□□□□□ -2.98
RPS28BP0C0X0 tS(GCU)Q1tS(GCU)Q1 86 nt-3.6□□□□□ -2.99
RPS28BP0C0X0 YOR231C-AYOR231C-A 201 nt-3.61□□□□□ -2.99
RPS28BP0C0X0 YBL100W-CYBL100W-C 120 nt-3.63□□□□□ -2.99
RPS28BP0C0X0 YAL037C-AYAL037C-A 93 nt-3.64□□□□□ -2.99
RPS28BP0C0X0 YKL096C-BYKL096C-B 150 nt-3.66□□□□□ -3
RPS28BP0C0X0 YHR175W-AYHR175W-A 150 nt-3.72□□□□□ -3
RPS28BP0C0X0 snR58snR58 96 nt-3.79□□□□□ -3.02
RPS28BP0C0X0 YDL159W-AYDL159W-A 132 nt-3.81□□□□□ -3.02
RPS28BP0C0X0 YGR122C-AYGR122C-A 129 nt-3.83□□□□□ -3.02
RPS28BP0C0X0 YDR034C-AYDR034C-A 177 nt-3.89□□□□□ -3.03
RPS28BP0C0X0 tR(ACG)Q2tR(ACG)Q2 74 nt-3.94□□□□□ -3.04
RPS28BP0C0X0 YCL001W-BYCL001W-B 255 nt-3.94□□□□□ -3.04
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms