Protein–RNA interactions for Protein: P08425

MSF1, Phenylalanine--tRNA ligase, mitochondrial, yeastyeast

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSF1P08425 YER090C-AYER090C-A 90 nt-0.84□□□□□ -2.54
MSF1P08425 YFL019CYFL019C 354 nt-0.84□□□□□ -2.54
MSF1P08425 YNL266WYNL266W 420 nt-0.86□□□□□ -2.55
MSF1P08425 snR49snR49 165 nt-0.86□□□□□ -2.55
MSF1P08425 YNL097C-BYNL097C-B 123 nt-0.87□□□□□ -2.55
MSF1P08425 YGR146C-AYGR146C-A 162 nt-0.88□□□□□ -2.55
MSF1P08425 snR50snR50 90 nt-0.88□□□□□ -2.55
MSF1P08425 GIM4YEL003W 336 nt-0.89□□□□□ -2.55
MSF1P08425 tT(UGU)G1tT(UGU)G1 72 nt-0.89□□□□□ -2.55
MSF1P08425 tT(UGU)G2tT(UGU)G2 72 nt-0.89□□□□□ -2.55
MSF1P08425 tT(UGU)PtT(UGU)P 72 nt-0.89□□□□□ -2.55
MSF1P08425 PMP2YEL017C-A 132 nt-0.9□□□□□ -2.55
MSF1P08425 tM(CAU)Q2tM(CAU)Q2 78 nt-0.9□□□□□ -2.55
MSF1P08425 RDS3YPR094W 324 nt-0.9□□□□□ -2.55
MSF1P08425 snR39BsnR39B 96 nt-0.91□□□□□ -2.56
MSF1P08425 snR55snR55 98 nt-0.95□□□□□ -2.56
MSF1P08425 JLP2YMR132C 627 nt-0.95□□□□□ -2.56
MSF1P08425 YOR329W-AYOR329W-A 210 nt-0.96□□□□□ -2.56
MSF1P08425 YOR302WYOR302W 78 nt-1.01□□□□□ -2.57
MSF1P08425 YNR077CYNR077C 255 nt-1.02□□□□□ -2.57
MSF1P08425 tD(GUC)QtD(GUC)Q 75 nt-1.04□□□□□ -2.58
MSF1P08425 YOL155W-AYOL155W-A 135 nt-1.05□□□□□ -2.58
MSF1P08425 SKI7YOR076C 2244 nt-1.05□□□□□ -2.58
MSF1P08425 YPL152W-AYPL152W-A 99 nt-1.06□□□□□ -2.58
MSF1P08425 snR67snR67 82 nt-1.07□□□□□ -2.58
MSF1P08425 YLR286W-AYLR286W-A 135 nt-1.07□□□□□ -2.58
MSF1P08425 snR65snR65 100 nt-1.08□□□□□ -2.58
MSF1P08425 snR48snR48 113 nt-1.08□□□□□ -2.58
MSF1P08425 snR161snR161 161 nt-1.09□□□□□ -2.58
MSF1P08425 YNL205CYNL205C 423 nt-1.12□□□□□ -2.59
MSF1P08425 YBR178WYBR178W 375 nt-1.12□□□□□ -2.59
MSF1P08425 tL(UAA)QtL(UAA)Q 85 nt-1.14□□□□□ -2.59
MSF1P08425 YDL159C-BYDL159C-B 177 nt-1.15□□□□□ -2.59
MSF1P08425 tP(UGG)QtP(UGG)Q 72 nt-1.16□□□□□ -2.6
MSF1P08425 YHR175W-AYHR175W-A 150 nt-1.19□□□□□ -2.6
MSF1P08425 YBR223W-AYBR223W-A 120 nt-1.21□□□□□ -2.6
MSF1P08425 YGL188C-AYGL188C-A 141 nt-1.23□□□□□ -2.61
MSF1P08425 tR(ACG)Q2tR(ACG)Q2 74 nt-1.24□□□□□ -2.61
MSF1P08425 snR52snR52 92 nt-1.24□□□□□ -2.61
MSF1P08425 YML054C-AYML054C-A 159 nt-1.26□□□□□ -2.61
MSF1P08425 YOR102WYOR102W 351 nt-1.26□□□□□ -2.61
MSF1P08425 YOR231C-AYOR231C-A 201 nt-1.27□□□□□ -2.61
MSF1P08425 snR80snR80 171 nt-1.28□□□□□ -2.61
MSF1P08425 YLR342W-AYLR342W-A 174 nt-1.28□□□□□ -2.61
MSF1P08425 snR56snR56 88 nt-1.3□□□□□ -2.62
MSF1P08425 YLR299C-AYLR299C-A 93 nt-1.3□□□□□ -2.62
MSF1P08425 YHL015W-AYHL015W-A 84 nt-1.34□□□□□ -2.62
MSF1P08425 CDC65tQ(CUG)M 72 nt-1.36□□□□□ -2.63
MSF1P08425 YBR196C-AYBR196C-A 150 nt-1.36□□□□□ -2.63
MSF1P08425 snR77snR77 88 nt-1.38□□□□□ -2.63
MSF1P08425 YGR240C-AYGR240C-A 201 nt-1.42□□□□□ -2.64
MSF1P08425 YNL198CYNL198C 303 nt-1.44□□□□□ -2.64
MSF1P08425 YDR524W-CYDR524W-C 90 nt-1.45□□□□□ -2.64
MSF1P08425 YOR376W-AYOR376W-A 156 nt-1.47□□□□□ -2.64
MSF1P08425 YBL053WYBL053W 375 nt-1.52□□□□□ -2.65
MSF1P08425 tY(GUA)QtY(GUA)Q 84 nt-1.53□□□□□ -2.65
MSF1P08425 YDR406W-AYDR406W-A 246 nt-1.56□□□□□ -2.66
MSF1P08425 YHR180C-BYHR180C-B 105 nt-1.56□□□□□ -2.66
MSF1P08425 YJL150WYJL150W 303 nt-1.57□□□□□ -2.66
MSF1P08425 YMR315W-AYMR315W-A 108 nt-1.59□□□□□ -2.66
MSF1P08425 SOM1YEL059C-A 225 nt-1.6□□□□□ -2.67
MSF1P08425 snR81snR81 201 nt-1.61□□□□□ -2.67
MSF1P08425 YOR316C-AYOR316C-A 210 nt-1.66□□□□□ -2.68
MSF1P08425 YCR095W-AYCR095W-A 159 nt-1.67□□□□□ -2.68
MSF1P08425 YKL106C-AYKL106C-A 120 nt-1.7□□□□□ -2.68
MSF1P08425 YBR109W-AYBR109W-A 225 nt-1.73□□□□□ -2.69
MSF1P08425 YBR296C-AYBR296C-A 120 nt-1.78□□□□□ -2.69
MSF1P08425 snR38snR38 95 nt-1.8□□□□□ -2.7
MSF1P08425 RPL41AYDL184C 78 nt-1.82□□□□□ -2.7
MSF1P08425 YMR046W-AYMR046W-A 129 nt-1.82□□□□□ -2.7
MSF1P08425 YGR151CYGR151C 336 nt-1.84□□□□□ -2.7
MSF1P08425 YBL071C-BYBL071C-B 99 nt-1.84□□□□□ -2.7
MSF1P08425 YOR309CYOR309C 381 nt-1.86□□□□□ -2.71
MSF1P08425 YOL083C-AYOL083C-A 141 nt-1.87□□□□□ -2.71
MSF1P08425 SPG3YDR504C 384 nt-1.9□□□□□ -2.71
MSF1P08425 YOL164W-AYOL164W-A 183 nt-1.93□□□□□ -2.72
MSF1P08425 YCL001W-BYCL001W-B 255 nt-1.98□□□□□ -2.73
MSF1P08425 YAL037C-AYAL037C-A 93 nt-1.99□□□□□ -2.73
MSF1P08425 snR6snR6 112 nt-2.04□□□□□ -2.74
MSF1P08425 Q0142Q0142 177 nt-2.04□□□□□ -2.74
MSF1P08425 snR47snR47 99 nt-2.04□□□□□ -2.74
MSF1P08425 tM(CAU)Q1tM(CAU)Q1 76 nt-2.07□□□□□ -2.74
MSF1P08425 YLR466C-BYLR466C-B 117 nt-2.08□□□□□ -2.74
MSF1P08425 YBR126W-BYBR126W-B 144 nt-2.15□□□□□ -2.75
MSF1P08425 YBL100W-CYBL100W-C 120 nt-2.16□□□□□ -2.76
MSF1P08425 YOR335W-AYOR335W-A 81 nt-2.18□□□□□ -2.76
MSF1P08425 YNL338WYNL338W 159 nt-2.19□□□□□ -2.76
MSF1P08425 YNL337WYNL337W 255 nt-2.22□□□□□ -2.76
MSF1P08425 snR73snR73 106 nt-2.23□□□□□ -2.77
MSF1P08425 tS(GCU)Q1tS(GCU)Q1 86 nt-2.24□□□□□ -2.77
MSF1P08425 YKL225WYKL225W 348 nt-2.24□□□□□ -2.77
MSF1P08425 tV(UAC)QtV(UAC)Q 76 nt-2.28□□□□□ -2.77
MSF1P08425 YDL114W-AYDL114W-A 114 nt-2.34□□□□□ -2.78
MSF1P08425 RPL41BYDL133C-A 78 nt-2.34□□□□□ -2.78
MSF1P08425 YGL041C-BYGL041C-B 183 nt-2.47□□□□□ -2.8
MSF1P08425 snR85snR85 171 nt-2.48□□□□□ -2.81
MSF1P08425 YDR034C-AYDR034C-A 177 nt-2.51□□□□□ -2.81
MSF1P08425 YGL007C-AYGL007C-A 87 nt-2.52□□□□□ -2.81
MSF1P08425 YNL103W-AYNL103W-A 90 nt-2.52□□□□□ -2.81
MSF1P08425 Q0032Q0032 291 nt-2.56□□□□□ -2.82
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms