Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.53■□□□□ 0.24
CTSDP07339 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.53■□□□□ 0.24
CTSDP07339 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.53■□□□□ 0.24
CTSDP07339 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.53■□□□□ 0.24
CTSDP07339 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.53■□□□□ 0.24
CTSDP07339 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.53■□□□□ 0.24
CTSDP07339 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 AP001330.3-201ENST00000520123 633 ntBASIC16.53■□□□□ 0.24
CTSDP07339 SLC7A5P2-201ENST00000553010 536 ntBASIC16.53■□□□□ 0.24
CTSDP07339 DUX4L2-201ENST00000561772 1275 ntBASIC16.53■□□□□ 0.24
CTSDP07339 AC243732.1-201ENST00000612648 864 ntBASIC16.53■□□□□ 0.24
CTSDP07339 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
CTSDP07339 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.53■□□□□ 0.24
CTSDP07339 DUX4L6-201ENST00000626483 1275 ntBASIC16.53■□□□□ 0.24
CTSDP07339 DUX4L1-201ENST00000627662 1275 ntBASIC16.53■□□□□ 0.24
CTSDP07339 DUX4L8-201ENST00000629013 1275 ntBASIC16.53■□□□□ 0.24
CTSDP07339 DUX4L3-201ENST00000630187 1275 ntBASIC16.53■□□□□ 0.24
CTSDP07339 DUX4L7-201ENST00000630678 1275 ntBASIC16.53■□□□□ 0.24
CTSDP07339 DUX4L5-201ENST00000630834 1275 ntBASIC16.53■□□□□ 0.24
CTSDP07339 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CTSDP07339 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.53■□□□□ 0.24
CTSDP07339 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CTSDP07339 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.53■□□□□ 0.24
CTSDP07339 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.53■□□□□ 0.24
CTSDP07339 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.53■□□□□ 0.24
CTSDP07339 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTSDP07339 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSDP07339 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTSDP07339 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CTSDP07339 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSDP07339 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CTSDP07339 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTSDP07339 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.52■□□□□ 0.24
CTSDP07339 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSDP07339 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTSDP07339 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CTSDP07339 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.52■□□□□ 0.24
CTSDP07339 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.52■□□□□ 0.24
CTSDP07339 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTSDP07339 LINC01465-201ENST00000408887 1940 ntBASIC16.52■□□□□ 0.23
CTSDP07339 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.52■□□□□ 0.23
CTSDP07339 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.52■□□□□ 0.23
CTSDP07339 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CTSDP07339 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CTSDP07339 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.52■□□□□ 0.23
CTSDP07339 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CTSDP07339 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.52■□□□□ 0.23
CTSDP07339 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CTSDP07339 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
CTSDP07339 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CTSDP07339 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.52■□□□□ 0.23
CTSDP07339 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CTSDP07339 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.51■□□□□ 0.23
CTSDP07339 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSDP07339 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.51■□□□□ 0.23
CTSDP07339 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTSDP07339 AL032819.2-201ENST00000624543 2162 ntBASIC16.51■□□□□ 0.23
CTSDP07339 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.51■□□□□ 0.23
CTSDP07339 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTSDP07339 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CTSDP07339 EDA-201ENST00000338901 1233 ntBASIC16.51■□□□□ 0.23
CTSDP07339 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.51■□□□□ 0.23
CTSDP07339 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSDP07339 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.51■□□□□ 0.23
CTSDP07339 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.51■□□□□ 0.23
CTSDP07339 AIRN-201ENST00000601203 4374 ntBASIC16.51■□□□□ 0.23
CTSDP07339 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CTSDP07339 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CTSDP07339 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSDP07339 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSDP07339 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSDP07339 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.51■□□□□ 0.23
CTSDP07339 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTSDP07339 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTSDP07339 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTSDP07339 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CTSDP07339 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.51■□□□□ 0.23
CTSDP07339 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CTSDP07339 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
CTSDP07339 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.5■□□□□ 0.23
CTSDP07339 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.5■□□□□ 0.23
CTSDP07339 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms