Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC136944.6-201ENST00000634818 245 ntBASIC20.17■□□□□ 0.82
PDGFBP01127 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFBP01127 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PDGFBP01127 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFBP01127 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.17■□□□□ 0.82
PDGFBP01127 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFBP01127 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PDGFBP01127 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.16■□□□□ 0.82
PDGFBP01127 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PDGFBP01127 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.16■□□□□ 0.82
PDGFBP01127 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PDGFBP01127 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFBP01127 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PDGFBP01127 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.16■□□□□ 0.82
PDGFBP01127 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFBP01127 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.16■□□□□ 0.82
PDGFBP01127 AC116562.4-202ENST00000641738 218 ntBASIC20.16■□□□□ 0.82
PDGFBP01127 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFBP01127 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFBP01127 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.16■□□□□ 0.82
PDGFBP01127 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PDGFBP01127 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFBP01127 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFBP01127 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
PDGFBP01127 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PDGFBP01127 PVRIG2P-201ENST00000435460 978 ntBASIC20.15■□□□□ 0.82
PDGFBP01127 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFBP01127 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFBP01127 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.15■□□□□ 0.82
PDGFBP01127 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.15■□□□□ 0.82
PDGFBP01127 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
PDGFBP01127 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.15■□□□□ 0.82
PDGFBP01127 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.15■□□□□ 0.82
PDGFBP01127 AC069148.1-201ENST00000608741 768 ntBASIC20.15■□□□□ 0.82
PDGFBP01127 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFBP01127 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PDGFBP01127 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFBP01127 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDGFBP01127 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.14■□□□□ 0.81
PDGFBP01127 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFBP01127 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDGFBP01127 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.14■□□□□ 0.81
PDGFBP01127 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.14■□□□□ 0.81
PDGFBP01127 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDGFBP01127 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFBP01127 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFBP01127 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.14■□□□□ 0.81
PDGFBP01127 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.14■□□□□ 0.81
PDGFBP01127 AC008040.2-201ENST00000461049 708 ntBASIC20.14■□□□□ 0.81
PDGFBP01127 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.14■□□□□ 0.81
PDGFBP01127 AP000692.2-201ENST00000608391 879 ntBASIC20.14■□□□□ 0.81
PDGFBP01127 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.14■□□□□ 0.81
PDGFBP01127 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
PDGFBP01127 AC130371.2-201ENST00000619443 611 ntBASIC20.14■□□□□ 0.81
PDGFBP01127 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFBP01127 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.14■□□□□ 0.81
PDGFBP01127 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFBP01127 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.14■□□□□ 0.81
PDGFBP01127 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFBP01127 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.13■□□□□ 0.81
PDGFBP01127 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFBP01127 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PDGFBP01127 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFBP01127 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFBP01127 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PDGFBP01127 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PDGFBP01127 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PDGFBP01127 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.13■□□□□ 0.81
PDGFBP01127 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.13■□□□□ 0.81
PDGFBP01127 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.13■□□□□ 0.81
PDGFBP01127 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.13■□□□□ 0.81
PDGFBP01127 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFBP01127 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFBP01127 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PDGFBP01127 AC011484.1-201ENST00000377652 1995 ntBASIC20.13■□□□□ 0.81
PDGFBP01127 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFBP01127 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFBP01127 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFBP01127 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.12■□□□□ 0.81
PDGFBP01127 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PDGFBP01127 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PDGFBP01127 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFBP01127 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.12■□□□□ 0.81
PDGFBP01127 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFBP01127 AC007663.1-201ENST00000438948 1240 ntBASIC20.12■□□□□ 0.81
PDGFBP01127 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.12■□□□□ 0.81
PDGFBP01127 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.12■□□□□ 0.81
PDGFBP01127 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.12■□□□□ 0.81
PDGFBP01127 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.12■□□□□ 0.81
PDGFBP01127 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.12■□□□□ 0.81
PDGFBP01127 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.12■□□□□ 0.81
PDGFBP01127 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.12■□□□□ 0.81
PDGFBP01127 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.12■□□□□ 0.81
PDGFBP01127 AC131212.4-201ENST00000623606 975 ntBASIC20.12■□□□□ 0.81
PDGFBP01127 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFBP01127 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFBP01127 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFBP01127 PTBP1P-201ENST00000554374 1601 ntBASIC20.12■□□□□ 0.81
PDGFBP01127 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PDGFBP01127 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms