Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TOMM40O96008 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TOMM40O96008 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TOMM40O96008 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TOMM40O96008 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TOMM40O96008 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TOMM40O96008 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.58■□□□□ 0.08
TOMM40O96008 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TOMM40O96008 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TOMM40O96008 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TOMM40O96008 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.58■□□□□ 0.08
TOMM40O96008 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.58■□□□□ 0.08
TOMM40O96008 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.58■□□□□ 0.08
TOMM40O96008 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.58■□□□□ 0.08
TOMM40O96008 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.58■□□□□ 0.08
TOMM40O96008 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
TOMM40O96008 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TOMM40O96008 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.58■□□□□ 0.08
TOMM40O96008 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.58■□□□□ 0.08
TOMM40O96008 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TOMM40O96008 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TOMM40O96008 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TOMM40O96008 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
TOMM40O96008 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
TOMM40O96008 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TOMM40O96008 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.57■□□□□ 0.08
TOMM40O96008 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TOMM40O96008 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TOMM40O96008 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.57■□□□□ 0.08
TOMM40O96008 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.57■□□□□ 0.08
TOMM40O96008 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TOMM40O96008 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.57■□□□□ 0.08
TOMM40O96008 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TOMM40O96008 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOMM40O96008 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TOMM40O96008 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOMM40O96008 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOMM40O96008 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.56■□□□□ 0.08
TOMM40O96008 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TOMM40O96008 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.56■□□□□ 0.08
TOMM40O96008 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.56■□□□□ 0.08
TOMM40O96008 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.56■□□□□ 0.08
TOMM40O96008 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.56■□□□□ 0.08
TOMM40O96008 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.56■□□□□ 0.08
TOMM40O96008 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.56■□□□□ 0.08
TOMM40O96008 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TOMM40O96008 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOMM40O96008 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TOMM40O96008 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.56■□□□□ 0.08
TOMM40O96008 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOMM40O96008 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TOMM40O96008 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOMM40O96008 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.56■□□□□ 0.08
TOMM40O96008 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TOMM40O96008 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOMM40O96008 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
TOMM40O96008 AL691432.2-201ENST00000607222 2038 ntBASIC15.56■□□□□ 0.08
TOMM40O96008 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.56■□□□□ 0.08
TOMM40O96008 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.56■□□□□ 0.08
TOMM40O96008 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TOMM40O96008 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TOMM40O96008 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.55■□□□□ 0.08
TOMM40O96008 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TOMM40O96008 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TOMM40O96008 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TOMM40O96008 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TOMM40O96008 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.55■□□□□ 0.08
TOMM40O96008 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.55■□□□□ 0.08
TOMM40O96008 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TOMM40O96008 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms