Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.86■□□□□ 0.77
PRAMEF1O95521 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF1O95521 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.86■□□□□ 0.77
PRAMEF1O95521 RNA5SP413-201ENST00000516373 109 ntBASIC19.86■□□□□ 0.77
PRAMEF1O95521 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.86■□□□□ 0.77
PRAMEF1O95521 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF1O95521 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF1O95521 KRT18P6-201ENST00000555540 1265 ntBASIC19.86■□□□□ 0.77
PRAMEF1O95521 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.86■□□□□ 0.77
PRAMEF1O95521 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF1O95521 AC006557.6-201ENST00000623071 864 ntBASIC19.86■□□□□ 0.77
PRAMEF1O95521 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 TCF3P1-201ENST00000423021 1937 ntBASIC19.86■□□□□ 0.77
PRAMEF1O95521 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.85■□□□□ 0.77
PRAMEF1O95521 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 SLC25A24-204ENST00000569674 2357 ntBASIC19.85■□□□□ 0.77
PRAMEF1O95521 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PRAMEF1O95521 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.85■□□□□ 0.77
PRAMEF1O95521 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF1O95521 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF1O95521 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF1O95521 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF1O95521 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF1O95521 AL691432.2-201ENST00000607222 2038 ntBASIC19.85■□□□□ 0.77
PRAMEF1O95521 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF1O95521 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF1O95521 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF1O95521 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRAMEF1O95521 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.84■□□□□ 0.77
PRAMEF1O95521 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.84■□□□□ 0.77
PRAMEF1O95521 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF1O95521 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PRAMEF1O95521 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF1O95521 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF1O95521 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF1O95521 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF1O95521 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF1O95521 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF1O95521 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF1O95521 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF1O95521 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF1O95521 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF1O95521 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF1O95521 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF1O95521 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 SOX15-203ENST00000570788 1093 ntBASIC19.83■□□□□ 0.77
PRAMEF1O95521 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.83■□□□□ 0.77
PRAMEF1O95521 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEF1O95521 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEF1O95521 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.83■□□□□ 0.76
PRAMEF1O95521 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.83■□□□□ 0.76
PRAMEF1O95521 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEF1O95521 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.83■□□□□ 0.76
PRAMEF1O95521 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.83■□□□□ 0.76
PRAMEF1O95521 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.83■□□□□ 0.76
PRAMEF1O95521 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.83■□□□□ 0.76
PRAMEF1O95521 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
PRAMEF1O95521 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF1O95521 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF1O95521 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEF1O95521 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms