Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC31.28■■■□□ 2.6
PCF11O94913 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC31.27■■■□□ 2.6
PCF11O94913 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC31.27■■■□□ 2.6
PCF11O94913 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC31.27■■■□□ 2.6
PCF11O94913 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC31.27■■■□□ 2.6
PCF11O94913 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC31.27■■■□□ 2.6
PCF11O94913 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC31.27■■■□□ 2.6
PCF11O94913 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCF11O94913 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCF11O94913 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCF11O94913 AL049597.2-201ENST00000565575 961 ntBASIC31.26■■■□□ 2.6
PCF11O94913 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC31.26■■■□□ 2.6
PCF11O94913 AP000525.1-201ENST00000608286 694 ntBASIC31.26■■■□□ 2.6
PCF11O94913 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC31.26■■■□□ 2.6
PCF11O94913 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC31.26■■■□□ 2.59
PCF11O94913 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PCF11O94913 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
PCF11O94913 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
PCF11O94913 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC31.26■■■□□ 2.59
PCF11O94913 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PCF11O94913 AL390955.1-201ENST00000428694 934 ntBASIC31.26■■■□□ 2.59
PCF11O94913 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
PCF11O94913 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PCF11O94913 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC31.25■■■□□ 2.59
PCF11O94913 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCF11O94913 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PCF11O94913 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PCF11O94913 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC31.25■■■□□ 2.59
PCF11O94913 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PCF11O94913 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC31.25■■■□□ 2.59
PCF11O94913 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCF11O94913 AP002982.1-201ENST00000492365 877 ntBASIC31.25■■■□□ 2.59
PCF11O94913 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC31.25■■■□□ 2.59
PCF11O94913 MIR6786-201ENST00000616843 113 ntBASIC31.25■■■□□ 2.59
PCF11O94913 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PCF11O94913 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC31.24■■■□□ 2.59
PCF11O94913 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC31.24■■■□□ 2.59
PCF11O94913 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC31.24■■■□□ 2.59
PCF11O94913 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCF11O94913 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCF11O94913 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
PCF11O94913 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PCF11O94913 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCF11O94913 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
PCF11O94913 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCF11O94913 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC31.24■■■□□ 2.59
PCF11O94913 AL590326.2-201ENST00000625139 305 ntBASIC31.24■■■□□ 2.59
PCF11O94913 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCF11O94913 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCF11O94913 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC31.24■■■□□ 2.59
PCF11O94913 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PCF11O94913 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCF11O94913 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCF11O94913 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCF11O94913 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCF11O94913 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PCF11O94913 RMI2-205ENST00000576027 818 ntTSL 2 BASIC31.23■■■□□ 2.59
PCF11O94913 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC31.23■■■□□ 2.59
PCF11O94913 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
PCF11O94913 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC31.23■■■□□ 2.59
PCF11O94913 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PCF11O94913 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCF11O94913 AC092720.2-201ENST00000602388 1665 ntBASIC31.22■■■□□ 2.59
PCF11O94913 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PCF11O94913 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC31.22■■■□□ 2.59
PCF11O94913 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCF11O94913 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCF11O94913 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC31.22■■■□□ 2.59
PCF11O94913 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PCF11O94913 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCF11O94913 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PCF11O94913 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
PCF11O94913 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC31.21■■■□□ 2.59
PCF11O94913 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC31.21■■■□□ 2.59
PCF11O94913 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PCF11O94913 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.21■■■□□ 2.59
PCF11O94913 AL355355.2-201ENST00000442321 338 ntBASIC31.21■■■□□ 2.59
PCF11O94913 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC31.21■■■□□ 2.59
PCF11O94913 AC026271.3-201ENST00000571884 352 ntBASIC31.21■■■□□ 2.59
PCF11O94913 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC31.21■■■□□ 2.59
PCF11O94913 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC31.21■■■□□ 2.59
PCF11O94913 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
PCF11O94913 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC31.2■■■□□ 2.59
PCF11O94913 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC31.2■■■□□ 2.59
PCF11O94913 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC31.2■■■□□ 2.59
PCF11O94913 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PCF11O94913 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC31.2■■■□□ 2.59
PCF11O94913 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PCF11O94913 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
PCF11O94913 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PCF11O94913 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
PCF11O94913 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
PCF11O94913 KSR1P1-201ENST00000446298 240 ntBASIC31.2■■■□□ 2.58
PCF11O94913 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC31.2■■■□□ 2.58
PCF11O94913 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC31.2■■■□□ 2.58
PCF11O94913 ABBA01031674.1-201ENST00000635145 728 ntBASIC31.2■■■□□ 2.58
PCF11O94913 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
PCF11O94913 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
PCF11O94913 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC31.2■■■□□ 2.58
PCF11O94913 AC018553.1-201ENST00000616682 1458 ntBASIC31.2■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms