Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.22□□□□□ -0.13
PAX4O43316 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.22□□□□□ -0.13
PAX4O43316 GABARAPL3-202ENST00000624044 1851 ntBASIC14.22□□□□□ -0.13
PAX4O43316 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PAX4O43316 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
PAX4O43316 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 AP005212.1-201ENST00000581547 1997 ntBASIC14.22□□□□□ -0.13
PAX4O43316 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PAX4O43316 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PAX4O43316 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PAX4O43316 AL157384.1-201ENST00000445995 2473 ntBASIC14.21□□□□□ -0.13
PAX4O43316 LINC01006-201ENST00000333319 2292 ntBASIC14.21□□□□□ -0.13
PAX4O43316 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PAX4O43316 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.21□□□□□ -0.13
PAX4O43316 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
PAX4O43316 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.21□□□□□ -0.13
PAX4O43316 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.21□□□□□ -0.13
PAX4O43316 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PAX4O43316 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.21□□□□□ -0.13
PAX4O43316 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.21□□□□□ -0.13
PAX4O43316 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.21□□□□□ -0.13
PAX4O43316 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PAX4O43316 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.21□□□□□ -0.14
PAX4O43316 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PAX4O43316 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
PAX4O43316 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.2□□□□□ -0.14
PAX4O43316 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PAX4O43316 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.2□□□□□ -0.14
PAX4O43316 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.2□□□□□ -0.14
PAX4O43316 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 LINC01521-201ENST00000504184 1943 ntBASIC14.2□□□□□ -0.14
PAX4O43316 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PAX4O43316 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.2□□□□□ -0.14
PAX4O43316 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PAX4O43316 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.2□□□□□ -0.14
PAX4O43316 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.2□□□□□ -0.14
PAX4O43316 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.2□□□□□ -0.14
PAX4O43316 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.2□□□□□ -0.14
PAX4O43316 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.2□□□□□ -0.14
PAX4O43316 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.2□□□□□ -0.14
PAX4O43316 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
PAX4O43316 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.2□□□□□ -0.14
PAX4O43316 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 KRT17P1-201ENST00000399211 1546 ntBASIC14.2□□□□□ -0.14
PAX4O43316 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.2□□□□□ -0.14
PAX4O43316 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PAX4O43316 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX4O43316 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX4O43316 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.19□□□□□ -0.14
PAX4O43316 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX4O43316 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX4O43316 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX4O43316 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.19□□□□□ -0.14
PAX4O43316 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.19□□□□□ -0.14
PAX4O43316 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.19□□□□□ -0.14
PAX4O43316 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX4O43316 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PAX4O43316 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
PAX4O43316 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PAX4O43316 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms