Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF113AO15541 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.98■■□□□ 1.43
RNF113AO15541 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF113AO15541 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.98■■□□□ 1.43
RNF113AO15541 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF113AO15541 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.98■■□□□ 1.43
RNF113AO15541 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF113AO15541 AC069544.1-201ENST00000609399 999 ntBASIC23.98■■□□□ 1.43
RNF113AO15541 ITM2C-210ENST00000620962 501 ntBASIC23.98■■□□□ 1.43
RNF113AO15541 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF113AO15541 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.98■■□□□ 1.43
RNF113AO15541 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RNF113AO15541 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF113AO15541 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF113AO15541 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF113AO15541 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF113AO15541 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF113AO15541 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RNF113AO15541 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF113AO15541 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF113AO15541 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF113AO15541 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF113AO15541 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF113AO15541 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.97■■□□□ 1.43
RNF113AO15541 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.97■■□□□ 1.43
RNF113AO15541 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RNF113AO15541 AL691432.2-201ENST00000607222 2038 ntBASIC23.97■■□□□ 1.43
RNF113AO15541 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF113AO15541 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF113AO15541 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
RNF113AO15541 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF113AO15541 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RNF113AO15541 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF113AO15541 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.95■■□□□ 1.43
RNF113AO15541 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.95■■□□□ 1.43
RNF113AO15541 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RNF113AO15541 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.95■■□□□ 1.43
RNF113AO15541 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RNF113AO15541 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF113AO15541 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.95■■□□□ 1.42
RNF113AO15541 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF113AO15541 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF113AO15541 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF113AO15541 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF113AO15541 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF113AO15541 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.95■■□□□ 1.42
RNF113AO15541 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RNF113AO15541 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.95■■□□□ 1.42
RNF113AO15541 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF113AO15541 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.95■■□□□ 1.42
RNF113AO15541 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.95■■□□□ 1.42
RNF113AO15541 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF113AO15541 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF113AO15541 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF113AO15541 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF113AO15541 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF113AO15541 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF113AO15541 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF113AO15541 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF113AO15541 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF113AO15541 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF113AO15541 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
RNF113AO15541 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF113AO15541 KRT18P29-201ENST00000397031 1267 ntBASIC23.94■■□□□ 1.42
RNF113AO15541 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF113AO15541 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.94■■□□□ 1.42
RNF113AO15541 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.94■■□□□ 1.42
RNF113AO15541 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.94■■□□□ 1.42
RNF113AO15541 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF113AO15541 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF113AO15541 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF113AO15541 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF113AO15541 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF113AO15541 AC112907.3-201ENST00000577781 2400 ntBASIC23.93■■□□□ 1.42
RNF113AO15541 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF113AO15541 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF113AO15541 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
RNF113AO15541 PHGDH-210ENST00000641115 1638 ntBASIC23.93■■□□□ 1.42
RNF113AO15541 TCF3P1-201ENST00000423021 1937 ntBASIC23.93■■□□□ 1.42
RNF113AO15541 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF113AO15541 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF113AO15541 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
RNF113AO15541 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.93■■□□□ 1.42
RNF113AO15541 MTDHP1-201ENST00000605323 784 ntBASIC23.93■■□□□ 1.42
RNF113AO15541 AL121829.2-201ENST00000620908 328 ntBASIC23.93■■□□□ 1.42
RNF113AO15541 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF113AO15541 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF113AO15541 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF113AO15541 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms