Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TNRC18O15417 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.93■■□□□ 1.1
TNRC18O15417 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.93■■□□□ 1.1
TNRC18O15417 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.93■■□□□ 1.1
TNRC18O15417 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.93■■□□□ 1.1
TNRC18O15417 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
TNRC18O15417 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TNRC18O15417 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.93■■□□□ 1.1
TNRC18O15417 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TNRC18O15417 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.93■■□□□ 1.1
TNRC18O15417 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TNRC18O15417 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.93■■□□□ 1.1
TNRC18O15417 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNRC18O15417 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.93■■□□□ 1.1
TNRC18O15417 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.93■■□□□ 1.1
TNRC18O15417 MIR3197-201ENST00000582241 73 ntBASIC21.93■■□□□ 1.1
TNRC18O15417 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNRC18O15417 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
TNRC18O15417 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNRC18O15417 KRT18P58-201ENST00000527480 1120 ntBASIC21.92■■□□□ 1.1
TNRC18O15417 C1QL1P1-201ENST00000568105 661 ntBASIC21.92■■□□□ 1.1
TNRC18O15417 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.92■■□□□ 1.1
TNRC18O15417 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TNRC18O15417 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNRC18O15417 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.92■■□□□ 1.1
TNRC18O15417 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TNRC18O15417 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.92■■□□□ 1.1
TNRC18O15417 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.92■■□□□ 1.1
TNRC18O15417 AC068473.5-201ENST00000616428 2072 ntBASIC21.92■■□□□ 1.1
TNRC18O15417 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.91■■□□□ 1.1
TNRC18O15417 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNRC18O15417 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNRC18O15417 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TNRC18O15417 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNRC18O15417 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.91■■□□□ 1.1
TNRC18O15417 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNRC18O15417 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNRC18O15417 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.91■■□□□ 1.1
TNRC18O15417 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNRC18O15417 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNRC18O15417 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TNRC18O15417 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.9■■□□□ 1.1
TNRC18O15417 AC023632.3-201ENST00000521633 145 ntBASIC21.9■■□□□ 1.1
TNRC18O15417 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNRC18O15417 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNRC18O15417 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TNRC18O15417 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TNRC18O15417 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TNRC18O15417 AP002383.4-201ENST00000442518 975 ntBASIC21.9■■□□□ 1.1
TNRC18O15417 TSPY17P-201ENST00000450329 467 ntBASIC21.9■■□□□ 1.1
TNRC18O15417 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNRC18O15417 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.9■■□□□ 1.1
TNRC18O15417 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.9■■□□□ 1.1
TNRC18O15417 BX842568.4-201ENST00000421222 227 ntBASIC21.9■■□□□ 1.1
TNRC18O15417 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNRC18O15417 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.9■■□□□ 1.1
TNRC18O15417 RCC2P6-201ENST00000526625 1557 ntBASIC21.9■■□□□ 1.1
TNRC18O15417 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TNRC18O15417 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TNRC18O15417 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TNRC18O15417 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.89■■□□□ 1.1
TNRC18O15417 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TNRC18O15417 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TNRC18O15417 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TNRC18O15417 TSPY19P-201ENST00000418461 509 ntBASIC21.89■■□□□ 1.09
TNRC18O15417 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.89■■□□□ 1.09
TNRC18O15417 TSPY18P-201ENST00000441642 509 ntBASIC21.89■■□□□ 1.09
TNRC18O15417 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.89■■□□□ 1.09
TNRC18O15417 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TNRC18O15417 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNRC18O15417 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNRC18O15417 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.88■■□□□ 1.09
TNRC18O15417 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.88■■□□□ 1.09
TNRC18O15417 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.88■■□□□ 1.09
TNRC18O15417 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.88■■□□□ 1.09
TNRC18O15417 AL353719.1-201ENST00000566847 864 ntBASIC21.88■■□□□ 1.09
TNRC18O15417 AC140113.3-201ENST00000605663 199 ntBASIC21.88■■□□□ 1.09
TNRC18O15417 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.88■■□□□ 1.09
TNRC18O15417 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.88■■□□□ 1.09
TNRC18O15417 AC092068.2-201ENST00000590491 1708 ntBASIC21.88■■□□□ 1.09
TNRC18O15417 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNRC18O15417 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNRC18O15417 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.88■■□□□ 1.09
TNRC18O15417 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
TNRC18O15417 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.88■■□□□ 1.09
TNRC18O15417 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNRC18O15417 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms