Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
DDX39AO00148 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX39AO00148 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.45■■□□□ 1.19
DDX39AO00148 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
DDX39AO00148 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
DDX39AO00148 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.19
DDX39AO00148 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
DDX39AO00148 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
DDX39AO00148 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
DDX39AO00148 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX39AO00148 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.45■■□□□ 1.18
DDX39AO00148 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.45■■□□□ 1.18
DDX39AO00148 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.45■■□□□ 1.18
DDX39AO00148 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.45■■□□□ 1.18
DDX39AO00148 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX39AO00148 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.45■■□□□ 1.18
DDX39AO00148 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.45■■□□□ 1.18
DDX39AO00148 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX39AO00148 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
DDX39AO00148 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
DDX39AO00148 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX39AO00148 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX39AO00148 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX39AO00148 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX39AO00148 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DDX39AO00148 FEM1AP1-201ENST00000431297 1995 ntBASIC22.44■■□□□ 1.18
DDX39AO00148 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
DDX39AO00148 AL157384.1-201ENST00000445995 2473 ntBASIC22.44■■□□□ 1.18
DDX39AO00148 UBE2SP1-201ENST00000450587 669 ntBASIC22.44■■□□□ 1.18
DDX39AO00148 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.44■■□□□ 1.18
DDX39AO00148 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.44■■□□□ 1.18
DDX39AO00148 PRKY-204ENST00000533551 1019 ntBASIC22.44■■□□□ 1.18
DDX39AO00148 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.44■■□□□ 1.18
DDX39AO00148 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.44■■□□□ 1.18
DDX39AO00148 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.44■■□□□ 1.18
DDX39AO00148 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.44■■□□□ 1.18
DDX39AO00148 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.44■■□□□ 1.18
DDX39AO00148 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
DDX39AO00148 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
DDX39AO00148 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
DDX39AO00148 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.44■■□□□ 1.18
DDX39AO00148 AP006294.2-201ENST00000641667 209 ntBASIC22.44■■□□□ 1.18
DDX39AO00148 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.44■■□□□ 1.18
DDX39AO00148 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
DDX39AO00148 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
DDX39AO00148 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.43■■□□□ 1.18
DDX39AO00148 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.43■■□□□ 1.18
DDX39AO00148 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.43■■□□□ 1.18
DDX39AO00148 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.43■■□□□ 1.18
DDX39AO00148 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.43■■□□□ 1.18
DDX39AO00148 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 AL391422.3-201ENST00000603791 2761 ntBASIC22.43■■□□□ 1.18
DDX39AO00148 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
DDX39AO00148 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
DDX39AO00148 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
DDX39AO00148 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
DDX39AO00148 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
DDX39AO00148 AP005212.1-201ENST00000581547 1997 ntBASIC22.42■■□□□ 1.18
DDX39AO00148 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
DDX39AO00148 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX39AO00148 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX39AO00148 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.42■■□□□ 1.18
DDX39AO00148 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.42■■□□□ 1.18
DDX39AO00148 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.42■■□□□ 1.18
DDX39AO00148 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
DDX39AO00148 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX39AO00148 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX39AO00148 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX39AO00148 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.42■■□□□ 1.18
DDX39AO00148 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DDX39AO00148 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX39AO00148 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.41■■□□□ 1.18
DDX39AO00148 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms